Species:

1. Chaetoceros gracilis [TaxId:184592] [391019] (1 PDB entry)

   • Domain for 6ly5:

     • Domain d6ly5e_: 6ly5 e: [391020] Other proteins in same PDB: d6ly5a_, d6ly5b_, d6ly5c_, d6ly5d_, d6ly5f_, d6ly5j_ automated match to d4xk8e_ complexed with a86, bcr, cla, dd6, dgd, kc1, lhg, lmg, lmt, pqn, sf4, sqd

2. Chlamydomonas reinhardtii [TaxId:3055] [370429] (4 PDB entries)

   1. Domain for 6jo5:

      • Domain d6jo5e_: 6jo5 E: [370468] Other proteins in same PDB: d6jo51_, d6jo53_, d6jo54_, d6jo57_, d6jo58_, d6jo59_, d6jo5a_, d6jo5b_, d6jo5c_, d6jo5d_, d6jo5f_, d6jo5j_, d6jo5z_ automated match to d4y28e_ complexed with bcr, chl, cl0, cla, dgd, lhg, lmg, lut, pqn, sf4

   2. Domain for 6jo6:

      • Domain d6jo6e_: 6jo6 E: [370430] Other proteins in same PDB: d6jo61_, d6jo63_, d6jo64_, d6jo67_, d6jo68_, d6jo6a_, d6jo6b_, d6jo6c_, d6jo6d_, d6jo6f_, d6jo6j_, d6jo6z_ automated match to d4y28e_ complexed with bcr, chl, cl0, cla, dgd, lhg, lmg, lut, pqn, sf4

   3. Domain for 7dz7:

      • Domain d7dz7e_: 7dz7 E: [405408] Other proteins in same PDB: d7dz71_, d7dz73_, d7dz74_, d7dz77_, d7dz78_, d7dz79_, d7dz7a_, d7dz7b_, d7dz7c_, d7dz7d_, d7dz7f_, d7dz7j_, d7dz7u_, d7dz7v_, d7dz7w_, d7dz7x_, d7dz7y_, d7dz7z_ automated match to d4y28e_ complexed with bcr, chl, cla, dgd, lhg, lmg, lmu, lut, nex, pqn, sf4, tpo, xat; mutant

   4. Domain for 7dz8:

      • Domain d7dz8e_: 7dz8 E: [405122] Other proteins in same PDB: d7dz81_, d7dz83_, d7dz84_, d7dz87_, d7dz88_, d7dz89_, d7dz8a_, d7dz8b_, d7dz8c_, d7dz8d_, d7dz8f_, d7dz8j_, d7dz8u_, d7dz8v_, d7dz8w_, d7dz8x_, d7dz8y_, d7dz8z_ automated match to d4y28e_ complexed with bcr, chl, cla, dgd, lhg, lmg, lmu, lut, nex, pqn, sf4, tpo, xat; mutant

3. Comamonas testosteroni [TaxId:285] [193572] (4 PDB entries)

   1. Domains for 4fm4:

      1. Domain d4fm4b_: 4fm4 B: [202047] Other proteins in same PDB: d4fm4a_, d4fm4c_, d4fm4e_, d4fm4g_, d4fm4i_, d4fm4k_, d4fm4m_, d4fm4o_ automated match to d4fm4j_ complexed with fe, po4

      2. Domain d4fm4d_: 4fm4 D: [202049] Other proteins in same PDB: d4fm4a_, d4fm4c_, d4fm4e_, d4fm4g_, d4fm4i_, d4fm4k_, d4fm4m_, d4fm4o_ automated match to d4fm4j_ complexed with fe, po4

      3. Domain d4fm4f_: 4fm4 F: [202051] Other proteins in same PDB: d4fm4a_, d4fm4c_, d4fm4e_, d4fm4g_, d4fm4i_, d4fm4k_, d4fm4m_, d4fm4o_ automated match to d4fm4j_ complexed with fe, po4

      4. Domain d4fm4h_: 4fm4 H: [202053] Other proteins in same PDB: d4fm4a_, d4fm4c_, d4fm4e_, d4fm4g_, d4fm4i_, d4fm4k_, d4fm4m_, d4fm4o_ automated match to d4fm4j_ complexed with fe, po4

      5. Domain d4fm4j_: 4fm4 J: [193573] Other proteins in same PDB: d4fm4a_, d4fm4c_, d4fm4e_, d4fm4g_, d4fm4i_, d4fm4k_, d4fm4m_, d4fm4o_ automated match to d3a8gb_ complexed with fe, po4

      6. Domain d4fm4l_: 4fm4 L: [202056] Other proteins in same PDB: d4fm4a_, d4fm4c_, d4fm4e_, d4fm4g_, d4fm4i_, d4fm4k_, d4fm4m_, d4fm4o_ automated match to d4fm4j_ complexed with fe, po4

      7. Domain d4fm4n_: 4fm4 N: [202058] Other proteins in same PDB: d4fm4a_, d4fm4c_, d4fm4e_, d4fm4g_, d4fm4i_, d4fm4k_, d4fm4m_, d4fm4o_ automated match to d4fm4j_ complexed with fe, po4

      8. Domain d4fm4p_: 4fm4 P: [202059] Other proteins in same PDB: d4fm4a_, d4fm4c_, d4fm4e_, d4fm4g_, d4fm4i_, d4fm4k_, d4fm4m_, d4fm4o_ automated match to d4fm4j_ complexed with fe, po4

   2. Domains for 4zgd:

      1. Domain d4zgdb_: 4zgd B: [274616] automated match to d4fm4b_ complexed with fe; mutant

      2. Domain d4zgdd_: 4zgd D: [274615] automated match to d4fm4b_ complexed with fe; mutant

      3. Domain d4zgdf_: 4zgd F: [274617] automated match to d4fm4b_ complexed with fe; mutant

      4. Domain d4zgdh_: 4zgd H: [274618] automated match to d4fm4b_ complexed with fe; mutant

      5. Domain d4zgdj_: 4zgd J: [274619] automated match to d4fm4b_ complexed with fe; mutant

      6. Domain d4zgdl_: 4zgd L: [274620] automated match to d4fm4b_ complexed with fe; mutant

      7. Domain d4zgdn_: 4zgd N: [274621] automated match to d4fm4b_ complexed with fe; mutant

      8. Domain d4zgdp_: 4zgd P: [274622] automated match to d4fm4b_ complexed with fe; mutant

   3. Domains for 4zge:

      1. Domain d4zgeb_: 4zge B: [274623] automated match to d4fm4b_ complexed with fe; mutant

      2. Domain d4zged_: 4zge D: [274624] automated match to d4fm4b_ complexed with fe; mutant

      3. Domain d4zgef_: 4zge F: [274625] automated match to d4fm4b_ complexed with fe; mutant

      4. Domain d4zgeh_: 4zge H: [274626] automated match to d4fm4b_ complexed with fe; mutant

      5. Domain d4zgej_: 4zge J: [274627] automated match to d4fm4b_ complexed with fe; mutant

      6. Domain d4zgel_: 4zge L: [274628] automated match to d4fm4b_ complexed with fe; mutant

      7. Domain d4zgen_: 4zge N: [274629] automated match to d4fm4b_ complexed with fe; mutant

      8. Domain d4zgep_: 4zge P: [274630] automated match to d4fm4b_ complexed with fe; mutant

   4. Domains for 4zgj:

      1. Domain d4zgjb_: 4zgj B: [274631] automated match to d4fm4b_ complexed with fe; mutant

      2. Domain d4zgjd_: 4zgj D: [274632] automated match to d4fm4b_ complexed with fe; mutant

      3. Domain d4zgjf_: 4zgj F: [274633] automated match to d4fm4b_ complexed with fe; mutant

      4. Domain d4zgjh_: 4zgj H: [274634] automated match to d4fm4b_ complexed with fe; mutant

      5. Domain d4zgjj_: 4zgj J: [274635] automated match to d4fm4b_ complexed with fe; mutant

      6. Domain d4zgjl_: 4zgj L: [274636] automated match to d4fm4b_ complexed with fe; mutant

      7. Domain d4zgjn_: 4zgj N: [274637] automated match to d4fm4b_ complexed with fe; mutant

      8. Domain d4zgjp_: 4zgj P: [274638] automated match to d4fm4b_ complexed with fe; mutant

4. Pea (Pisum sativum) [TaxId:3888] [311431] (7 PDB entries)

   1. Domain for 4rku:

      • Domain d4rkue_: 4rku E: [309467] Other proteins in same PDB: d4rku1_, d4rku3_, d4rku4_, d4rkua_, d4rkub_, d4rkuc_, d4rkud_, d4rkuf_, d4rkuj_ automated match to d4y28e_ complexed with bcr, cl0, cla, dgd, g3p, lhg, lmg, lut, nex, pqn, sf4

   2. Domain for 4xk8:

      • Domain d4xk8e_: 4xk8 E: [310037] Other proteins in same PDB: d4xk81_, d4xk82_, d4xk83_, d4xk84_, d4xk86_, d4xk87_, d4xk88_, d4xk89_, d4xk8a_, d4xk8b_, d4xk8c_, d4xk8d_, d4xk8f_, d4xk8j_ automated match to d4y28e_ complexed with bcr, chl, cla, dgd, htg, lhg, lmg, lmt, lut, pqn, sf4, xat

   3. Domain for 5l8r:

      • Domain d5l8re1: 5l8r E:66-129 [341185] Other proteins in same PDB: d5l8r1_, d5l8r2_, d5l8r3_, d5l8r4_, d5l8ra_, d5l8rb_, d5l8rc_, d5l8rd_, d5l8re2, d5l8rf_, d5l8rj_ automated match to d4y28e_ complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmt, lut, pqn, sf4, xat, zex

   4. Domain for 6yac:

      • Domain d6yace1: 6yac E:66-129 [393612] Other proteins in same PDB: d6yac1_, d6yac2_, d6yac3_, d6yac4_, d6yaca_, d6yacb_, d6yacc_, d6yacd_, d6yace2, d6yacf_, d6yacj_, d6yacn_ automated match to d4y28e_ complexed with bcr, c7z, ca, chl, cl0, cla, dgd, fes, lhg, lmg, lmt, lut, pqn, sf4, xat

   5. Domain for 6yez:

      • Domain d6yeze1: 6yez E:66-129 [393642] Other proteins in same PDB: d6yez1_, d6yez2_, d6yez3_, d6yez4_, d6yeza_, d6yezb_, d6yezc_, d6yezd_, d6yeze2, d6yezf_, d6yezj_, d6yezn_, d6yezp_ automated match to d4y28e_ complexed with 3ph, bcr, c7z, ca, chl, cl0, cla, cu, dgd, fes, lhg, lmg, lmt, lut, pqn, sf4, xat

   6. Domain for 6zoo:

      • Domain d6zooe1: 6zoo E:66-129 [407566] Other proteins in same PDB: d6zoo1_, d6zoo2_, d6zoo3_, d6zoo4_, d6zooa_, d6zoob_, d6zooc_, d6zood_, d6zooe2, d6zoof_, d6zooj_, d6zoop_ automated match to d4y28e_ complexed with 3ph, bcr, ca, chl, cl0, cla, cu, dgd, lhg, lmg, lmt, lut, pqn, sf4, xat

   7. Domain for 7dkz:

      • Domain d7dkze1: 7dkz E:1-59 [402497] Other proteins in same PDB: d7dkz1_, d7dkz2_, d7dkz3_, d7dkz4_, d7dkza_, d7dkzb_, d7dkzc_, d7dkzd_, d7dkze2, d7dkzf_, d7dkzj_ automated match to d4y28e_ complexed with bcr, chl, cla, dgd, htg, lhg, lmg, lmt, lut, pqn, sf4, xat

5. Pisum sativum [TaxId:4096] [276206] (1 PDB entry)

   • Domain for 4y28:

     • Domain d4y28e_: 4y28 E: [276209] Other proteins in same PDB: d4y281_, d4y282_, d4y283_, d4y284_, d4y28a_, d4y28b_, d4y28c_, d4y28d_, d4y28f_, d4y28j_ automated match to d1qp2a_ complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmu, lut, pqn, sf4, zex

6. Pseudomonas putida [TaxId:303] [189678] (5 PDB entries)

   1. Domains for 3qxe:

      1. Domain d3qxeb_: 3qxe B: [184679] Other proteins in same PDB: d3qxea_, d3qxec_, d3qxee_, d3qxeg_ automated match to d1ugpb_ complexed with 3co, gol

      2. Domain d3qxed_: 3qxe D: [184680] Other proteins in same PDB: d3qxea_, d3qxec_, d3qxee_, d3qxeg_ automated match to d1ugpb_ complexed with 3co, gol

      3. Domain d3qxef_: 3qxe F: [184681] Other proteins in same PDB: d3qxea_, d3qxec_, d3qxee_, d3qxeg_ automated match to d1ugpb_ complexed with 3co, gol

      4. Domain d3qxeh_: 3qxe H: [184682] Other proteins in same PDB: d3qxea_, d3qxec_, d3qxee_, d3qxeg_ automated match to d1ugpb_ complexed with 3co, gol

   2. Domains for 3qyg:

      1. Domain d3qygb_: 3qyg B: [184695] Other proteins in same PDB: d3qyga_, d3qygc_, d3qyge_, d3qygg_ automated match to d1ireb_ complexed with 3co, gol

      2. Domain d3qygd_: 3qyg D: [184696] Other proteins in same PDB: d3qyga_, d3qygc_, d3qyge_, d3qygg_ automated match to d1ireb_ complexed with 3co, gol

      3. Domain d3qygf_: 3qyg F: [184697] Other proteins in same PDB: d3qyga_, d3qygc_, d3qyge_, d3qygg_ automated match to d1ireb_ complexed with 3co, gol

      4. Domain d3qygh_: 3qyg H: [184698] Other proteins in same PDB: d3qyga_, d3qygc_, d3qyge_, d3qygg_ automated match to d1ireb_ complexed with 3co, gol

   3. Domains for 3qyh:

      1. Domain d3qyhb_: 3qyh B: [184699] Other proteins in same PDB: d3qyha_, d3qyhc_, d3qyhe_, d3qyhg_ automated match to d1ugpb_ complexed with 3co

      2. Domain d3qyhd_: 3qyh D: [184700] Other proteins in same PDB: d3qyha_, d3qyhc_, d3qyhe_, d3qyhg_ automated match to d1ugpb_ complexed with 3co

      3. Domain d3qyhf_: 3qyh F: [184701] Other proteins in same PDB: d3qyha_, d3qyhc_, d3qyhe_, d3qyhg_ automated match to d1ugpb_ complexed with 3co

      4. Domain d3qyhh_: 3qyh H: [184702] Other proteins in same PDB: d3qyha_, d3qyhc_, d3qyhe_, d3qyhg_ automated match to d1ugpb_ complexed with 3co

   4. Domains for 3qz5:

      1. Domain d3qz5b_: 3qz5 B: [184712] Other proteins in same PDB: d3qz5a_, d3qz5c_, d3qz5e_, d3qz5g_ automated match to d1ugpb_ complexed with 3co, gol

      2. Domain d3qz5d_: 3qz5 D: [184713] Other proteins in same PDB: d3qz5a_, d3qz5c_, d3qz5e_, d3qz5g_ automated match to d1ugpb_ complexed with 3co, gol

      3. Domain d3qz5f_: 3qz5 F: [184714] Other proteins in same PDB: d3qz5a_, d3qz5c_, d3qz5e_, d3qz5g_ automated match to d1ugpb_ complexed with 3co, gol

      4. Domain d3qz5h_: 3qz5 H: [184715] Other proteins in same PDB: d3qz5a_, d3qz5c_, d3qz5e_, d3qz5g_ automated match to d1ugpb_ complexed with 3co, gol

   5. Domains for 3qz9:

      1. Domain d3qz9b_: 3qz9 B: [184717] Other proteins in same PDB: d3qz9a_, d3qz9c_, d3qz9e_, d3qz9g_ automated match to d1ireb_ complexed with 3co, gol

      2. Domain d3qz9d_: 3qz9 D: [184718] Other proteins in same PDB: d3qz9a_, d3qz9c_, d3qz9e_, d3qz9g_ automated match to d1ireb_ complexed with 3co, gol

      3. Domain d3qz9f_: 3qz9 F: [184719] Other proteins in same PDB: d3qz9a_, d3qz9c_, d3qz9e_, d3qz9g_ automated match to d1ireb_ complexed with 3co, gol

      4. Domain d3qz9h_: 3qz9 H: [184720] Other proteins in same PDB: d3qz9a_, d3qz9c_, d3qz9e_, d3qz9g_ automated match to d1ireb_ complexed with 3co, gol

More info for Protein automated matches from b.34.4.0: automated matches

Timeline for Protein automated matches from b.34.4.0: automated matches:

• Protein automated matches from b.34.4.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from b.34.4.0: automated matches appears in SCOPe 2.06
  
• Protein automated matches from b.34.4.0: automated matches appears in the current release, SCOPe 2.08