Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2016643Fold a.280: RbcX-like [158614] (1 superfamily)
    5 helices per subunit; irregular array of short and long helices; swapping of the C-terminal helices in the dimer
  4. 2016644Superfamily a.280.1: RbcX-like [158615] (2 families) (S)
  5. 2016709Family a.280.1.0: automated matches [191655] (1 protein)
    not a true family
  6. 2016710Protein automated matches [191222] (3 species)
    not a true protein

Species:

  1. 2016711Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [275556] (2 PDB entries)
    1. Domains for 5bs1:
      1. 2016712Domain d5bs1a1: 5bs1 A:34-155 [275559]
        Other proteins in same PDB: d5bs1a2, d5bs1b2
        automated match to d4gr2b_
        complexed with mg
      2. 2016713Domain d5bs1b1: 5bs1 B:34-155 [275565]
        Other proteins in same PDB: d5bs1a2, d5bs1b2
        automated match to d4gr2b_
        complexed with mg
      3. 2016714Domain d5bs1c_: 5bs1 C: [275562]
        Other proteins in same PDB: d5bs1a2, d5bs1b2
        automated match to d4gr2b_
        complexed with mg
      4. 2016715Domain d5bs1d_: 5bs1 D: [275566]
        Other proteins in same PDB: d5bs1a2, d5bs1b2
        automated match to d4gr2b_
        complexed with mg
    2. Domains for 5bs2:
      1. 2016716Domain d5bs2a_: 5bs2 A: [275558]
        automated match to d4gr2b_
      2. 2016717Domain d5bs2b_: 5bs2 B: [275560]
        automated match to d4gr2b_
  2. 2016718Thale cress (Arabidopsis thaliana) [TaxId:3702] [256275] (2 PDB entries)
    1. Domains for 4gr2:
      1. 2016721Domain d4gr2a_: 4gr2 A: [252323]
        automated match to d2peik_
      2. 2016722Domain d4gr2b_: 4gr2 B: [252324]
        automated match to d2peik_
    2. Domains for 4gr6:
      1. 2016719Domain d4gr6a_: 4gr6 A: [266335]
        automated match to d4gr2a_
        complexed with edo
      2. 2016720Domain d4gr6b_: 4gr6 B: [266336]
        automated match to d4gr2a_
        complexed with edo
  3. 2016723Thermosynechococcus elongatus [TaxId:197221] [189620] (1 PDB entry)

More info for Protein automated matches from a.280.1.0: automated matches

Timeline for Protein automated matches from a.280.1.0: automated matches: