Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 1054197Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)
  3. 1056651Fold e.10: Prokaryotic type I DNA topoisomerase [56711] (1 superfamily)
    4 domains: (1) Toprim alpha/beta; (2&4) "winged helix"-like; (3) barrel: n=6, S=8
  4. 1056652Superfamily e.10.1: Prokaryotic type I DNA topoisomerase [56712] (1 family) (S)
    duplication: the protein chain passing through the domains 2-4 makes two structural repeats
    The active site is formed by the toprim and "winged helix" domains (domains 1 and 4); these two domains are also found in the type II topoisomerase (DNA gyrase A) and in the alpha subunit of topoisomerase IV
  5. 1056653Family e.10.1.1: Prokaryotic type I DNA topoisomerase [56713] (4 proteins)
    domain 4 contains the catalytic tyrosine residue
  6. 1056679Protein automated matches [191216] (2 species)
    not a true protein

Species:

  1. 1056680Escherichia coli K-12 [TaxId:83333] [189588] (1 PDB entry)
  2. 1056682Escherichia coli [TaxId:536056] [189925] (1 PDB entry)

More info for Protein automated matches from e.10.1.1: Prokaryotic type I DNA topoisomerase

Timeline for Protein automated matches from e.10.1.1: Prokaryotic type I DNA topoisomerase:

  • Protein automated matches from e.10.1.1: Prokaryotic type I DNA topoisomerase is new in SCOPe 2.01-stable
  • Protein automated matches from e.10.1.1: Prokaryotic type I DNA topoisomerase appears in SCOPe 2.02
  • Protein automated matches from e.10.1.1: Prokaryotic type I DNA topoisomerase appears in the current release, SCOPe 2.08