Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2509610Fold d.26: FKBP-like [54533] (3 superfamilies)
    core: beta(2)-alpha-beta(2); antiparallel beta-sheet
  4. 2509611Superfamily d.26.1: FKBP-like [54534] (4 families) (S)
  5. 2509612Family d.26.1.1: FKBP immunophilin/proline isomerase [54535] (17 protein domains)
  6. 2509852Protein automated matches [191209] (4 species)
    not a true protein

Species:

  1. 2509853Candida glabrata [TaxId:284593] [322580] (2 PDB entries)
    1. Domain for 5ht1:
    2. Domain for 5hua:
  2. 2509856Human (Homo sapiens) [TaxId:9606] [189839] (42 PDB entries)
    1. Domain for 2xp6:
    2. Domain for 3o5e:
    3. Domain for 3o5f:
    4. Domain for 3o5g:
    5. Domains for 3o5i:
      1. 2509893Domain d3o5ia1: 3o5i A:16-140 [214183]
        Other proteins in same PDB: d3o5ia2, d3o5ib2
        automated match to d4drja_
        complexed with act, gol
      2. 2509894Domain d3o5ib1: 3o5i B:16-140 [214184]
        Other proteins in same PDB: d3o5ia2, d3o5ib2
        automated match to d4drja_
        complexed with act, gol
    6. Domain for 3o5j:
    7. Domains for 3o5k:
      1. 2509903Domain d3o5ka1: 3o5k A:16-139 [214186]
        Other proteins in same PDB: d3o5ka2, d3o5kb2, d3o5kc2, d3o5kd2
        automated match to d4drja_
      2. 2509904Domain d3o5kb1: 3o5k B:16-139 [214187]
        Other proteins in same PDB: d3o5ka2, d3o5kb2, d3o5kc2, d3o5kd2
        automated match to d4drja_
      3. 2509905Domain d3o5kc1: 3o5k C:16-140 [214188]
        Other proteins in same PDB: d3o5ka2, d3o5kb2, d3o5kc2, d3o5kd2
        automated match to d4drja_
      4. 2509906Domain d3o5kd1: 3o5k D:16-140 [214189]
        Other proteins in same PDB: d3o5ka2, d3o5kb2, d3o5kc2, d3o5kd2
        automated match to d4drja_
    8. Domain for 3o5l:
    9. Domains for 3o5m:
      1. 2509886Domain d3o5ma1: 3o5m A:16-139 [214191]
        Other proteins in same PDB: d3o5ma2, d3o5mb2
        automated match to d4drja_
        complexed with gol; mutant
      2. 2509887Domain d3o5mb1: 3o5m B:16-139 [214192]
        Other proteins in same PDB: d3o5ma2, d3o5mb2
        automated match to d4drja_
        complexed with gol; mutant
    10. Domain for 3o5o:
    11. Domain for 3o5p:
    12. Domain for 3o5q:
    13. Domain for 3o5r:
    14. Domain for 3ui4:
    15. Domain for 3ui5:
    16. Domain for 3ui6:
    17. Domains for 4drh:
      1. 2509899Domain d4drha_: 4drh A: [201731]
        Other proteins in same PDB: d4drhb1, d4drhb2, d4drhe1, d4drhe2
        automated match to d1n1aa_
        complexed with rap, so4
      2. 2509900Domain d4drhd_: 4drh D: [201733]
        Other proteins in same PDB: d4drhb1, d4drhb2, d4drhe1, d4drhe2
        automated match to d1n1aa_
        complexed with rap, so4
    18. Domain for 4dri:
    19. Domains for 4drk:
      1. 2509880Domain d4drka1: 4drk A:16-140 [219970]
        Other proteins in same PDB: d4drka2, d4drkb2
        automated match to d4drja_
        complexed with i63
      2. 2509881Domain d4drkb1: 4drk B:16-139 [219971]
        Other proteins in same PDB: d4drka2, d4drkb2
        automated match to d4drja_
        complexed with i63
    20. Domain for 4drm:
    21. Domain for 4drn:
    22. Domain for 4dro:
    23. Domain for 4drp:
    24. Domain for 4drq:
    25. Domain for 4jfi:
    26. Domain for 4jfj:
    27. Domain for 4jfk:
    28. Domain for 4jfl:
    29. Domain for 4jfm:
    30. Domain for 4r0x:
    31. Domain for 4tw6:
    32. Domain for 4tw7:
    33. Domain for 4tx0:
    34. Domains for 4w9o:
      1. 2509876Domain d4w9oa_: 4w9o A: [261462]
        Other proteins in same PDB: d4w9oe2
        automated match to d3o5qa_
        complexed with 3jq, act
      2. 2509877Domain d4w9oe1: 4w9o E:16-139 [261463]
        Other proteins in same PDB: d4w9oe2
        automated match to d3o5qa_
        complexed with 3jq, act
    35. Domains for 4w9p:
      1. 2509889Domain d4w9pa_: 4w9p A: [261624]
        Other proteins in same PDB: d4w9pe2
        automated match to d3o5qa_
        complexed with 3jr, act
      2. 2509890Domain d4w9pe1: 4w9p E:16-139 [301106]
        Other proteins in same PDB: d4w9pe2
        automated match to d3o5qa_
        complexed with 3jr, act
    36. Domain for 4w9q:
    37. Domain for 5bxj:
    38. Domain for 5dit:
    39. Domain for 5diu:
    40. Domain for 5div:
    41. Domain for 5obk:
    42. Domains for 5omp:
      1. 2509901Domain d5ompa1: 5omp A:13-138 [341306]
        Other proteins in same PDB: d5ompa3
        automated match to d1kt1a2
        complexed with so4
      2. 2509902Domain d5ompa2: 5omp A:139-253 [341307]
        Other proteins in same PDB: d5ompa3
        automated match to d1kt1a3
        complexed with so4
  3. 2509908Mouse (Mus musculus) [TaxId:10090] [189566] (1 PDB entry)
  4. 2509910Yellow fever mosquito (Aedes aegypti) [TaxId:7159] [195032] (2 PDB entries)
    1. Domain for 2lpv:
    2. Domain for 3uqi:

More info for Protein automated matches from d.26.1.1: FKBP immunophilin/proline isomerase

Timeline for Protein automated matches from d.26.1.1: FKBP immunophilin/proline isomerase: