Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1939878Fold d.166: ADP-ribosylation [56398] (1 superfamily)
    unusual fold
  4. 1939879Superfamily d.166.1: ADP-ribosylation [56399] (8 families) (S)
  5. 1940165Family d.166.1.0: automated matches [191650] (1 protein)
    not a true family
  6. 1940166Protein automated matches [191197] (7 species)
    not a true protein

Species:

  1. 1940167Bacillus cereus [TaxId:1396] [274205] (3 PDB entries)
    1. Domain for 4xsg:
    2. Domain for 4xsh:
    3. Domain for 5bwm:
  2. 1940171Clostridium botulinum [TaxId:1491] [230888] (3 PDB entries)
    1. Domains for 2j3v:
      1. 1940174Domain d2j3va1: 2j3v A:2-217 [242184]
        automated match to d2j3za1
        complexed with gol, so4
      2. 1940175Domain d2j3va2: 2j3v A:218-431 [242185]
        automated match to d2j3za2
        complexed with gol, so4
    2. Domains for 2j3x:
      1. 1940172Domain d2j3xa1: 2j3x A:2-217 [242186]
        automated match to d2j3za1
        complexed with gol, so4
      2. 1940173Domain d2j3xa2: 2j3x A:218-431 [242187]
        automated match to d2j3za2
        complexed with gol, so4
    3. Domains for 2j3z:
      1. 1940176Domain d2j3za1: 2j3z A:2-217 [230889]
        automated match to d1giqa1
        complexed with co, gol, so4
      2. 1940177Domain d2j3za2: 2j3z A:218-431 [230890]
        automated match to d1giqa2
        complexed with co, gol, so4
      3. 1940178Domain d2j3zb1: 2j3z B:2-217 [230891]
        automated match to d1giqa1
        complexed with co, gol, so4
      4. 1940179Domain d2j3zb2: 2j3z B:218-431 [230892]
        automated match to d1giqa2
        complexed with co, gol, so4
      5. 1940180Domain d2j3zc1: 2j3z C:2-217 [230893]
        automated match to d1giqa1
        complexed with co, gol, so4
      6. 1940181Domain d2j3zc2: 2j3z C:218-429 [230894]
        automated match to d1giqa2
        complexed with co, gol, so4
      7. 1940182Domain d2j3zd1: 2j3z D:6-217 [230895]
        automated match to d1giqa1
        complexed with co, gol, so4
      8. 1940183Domain d2j3zd2: 2j3z D:218-426 [230896]
        automated match to d1giqa2
        complexed with co, gol, so4
      9. 1940184Domain d2j3ze1: 2j3z E:6-217 [230897]
        automated match to d1giqa1
        complexed with co, gol, so4
      10. 1940185Domain d2j3zf1: 2j3z F:6-217 [238697]
        automated match to d2j3za1
        complexed with co, gol, so4
      11. 1940186Domain d2j3zf2: 2j3z F:218-426 [238698]
        automated match to d2j3za2
        complexed with co, gol, so4
  3. 1940187Clostridium difficile [TaxId:1496] [231449] (5 PDB entries)
    1. Domains for 2wn4:
      1. 1940188Domain d2wn4a1: 2wn4 A:28-216 [231450]
        automated match to d1giqa1
      2. 1940189Domain d2wn4a2: 2wn4 A:217-420 [231451]
        automated match to d1giqa2
    2. Domains for 2wn5:
      1. 1940190Domain d2wn5a1: 2wn5 A:24-216 [231456]
        automated match to d1giqa1
      2. 1940191Domain d2wn5a2: 2wn5 A:217-420 [231457]
        automated match to d1giqa2
    3. Domains for 2wn6:
      1. 1940192Domain d2wn6a1: 2wn6 A:17-216 [231452]
        automated match to d1giqa1
        complexed with gol, ndp
      2. 1940193Domain d2wn6a2: 2wn6 A:217-420 [231455]
        automated match to d1giqa2
        complexed with gol, ndp
    4. Domains for 2wn7:
      1. 1940196Domain d2wn7a1: 2wn7 A:27-216 [231453]
        automated match to d1giqa1
        complexed with gol, nad
      2. 1940197Domain d2wn7a2: 2wn7 A:217-420 [231454]
        automated match to d1giqa2
        complexed with gol, nad
    5. Domains for 2wn8:
      1. 1940194Domain d2wn8a1: 2wn8 A:25-216 [231458]
        automated match to d1giqa1
      2. 1940195Domain d2wn8a2: 2wn8 A:217-420 [231459]
        automated match to d1giqa2
  4. 1940198Corynebacterium diphtheriae [TaxId:1717] [256176] (2 PDB entries)
    1. Domain for 4ae0:
    2. Domains for 4ae1:
      1. 1940200Domain d4ae1a1: 4ae1 A:1-187 [251011]
        Other proteins in same PDB: d4ae1a2, d4ae1a3, d4ae1b2, d4ae1b3
        automated match to d1f0la2
        complexed with nca; mutant
      2. 1940201Domain d4ae1b1: 4ae1 B:3-187 [251014]
        Other proteins in same PDB: d4ae1a2, d4ae1a3, d4ae1b2, d4ae1b3
        automated match to d1f0la2
        complexed with nca; mutant
  5. 1940202Human (Homo sapiens) [TaxId:9606] [225406] (26 PDB entries)
    1. Domains for 1wok:
      1. 1940246Domain d1woka2: 1wok A:797-1011 [121117]
        Other proteins in same PDB: d1woka1, d1wokb1, d1wokc1, d1wokd1
        automated match to d4hhyd2
        complexed with cnq
      2. 1940247Domain d1wokb2: 1wok B:797-1011 [121119]
        Other proteins in same PDB: d1woka1, d1wokb1, d1wokc1, d1wokd1
        automated match to d4hhyd2
        complexed with cnq
      3. 1940248Domain d1wokc2: 1wok C:797-1011 [121121]
        Other proteins in same PDB: d1woka1, d1wokb1, d1wokc1, d1wokd1
        automated match to d4hhyd2
        complexed with cnq
      4. 1940249Domain d1wokd2: 1wok D:797-1011 [121123]
        Other proteins in same PDB: d1woka1, d1wokb1, d1wokc1, d1wokd1
        automated match to d4hhyd2
        complexed with cnq
    2. Domain for 3c49:
    3. Domain for 3c4h:
    4. Domain for 3ce0:
    5. Domain for 3fhb:
    6. Domain for 4gv0:
    7. Domain for 4gv2:
    8. Domain for 4gv4:
    9. Domains for 4gv7:
      1. 1940240Domain d4gv7a2: 4gv7 A:797-1010 [222197]
        Other proteins in same PDB: d4gv7a1, d4gv7b1, d4gv7c1, d4gv7d1
        automated match to d1gs0a2
        complexed with mew
      2. 1940241Domain d4gv7b2: 4gv7 B:797-1010 [222199]
        Other proteins in same PDB: d4gv7a1, d4gv7b1, d4gv7c1, d4gv7d1
        automated match to d1gs0a2
        complexed with mew
      3. 1940242Domain d4gv7c2: 4gv7 C:797-1010 [222201]
        Other proteins in same PDB: d4gv7a1, d4gv7b1, d4gv7c1, d4gv7d1
        automated match to d1gs0a2
        complexed with mew
      4. 1940243Domain d4gv7d2: 4gv7 D:797-1010 [222203]
        Other proteins in same PDB: d4gv7a1, d4gv7b1, d4gv7c1, d4gv7d1
        automated match to d1gs0a2
        complexed with mew
    10. Domains for 4hhy:
      1. 1940222Domain d4hhya2: 4hhy A:136-349 [222603]
        Other proteins in same PDB: d4hhya1, d4hhyb1, d4hhyc1, d4hhyd1
        automated match to d1gs0a2
        complexed with 15r, peg, so4
      2. 1940223Domain d4hhyb2: 4hhy B:136-349 [222605]
        Other proteins in same PDB: d4hhya1, d4hhyb1, d4hhyc1, d4hhyd1
        automated match to d1gs0a2
        complexed with 15r, peg, so4
      3. 1940224Domain d4hhyc2: 4hhy C:136-350 [222607]
        Other proteins in same PDB: d4hhya1, d4hhyb1, d4hhyc1, d4hhyd1
        automated match to d1gs0a2
        complexed with 15r, peg, so4
      4. 1940225Domain d4hhyd2: 4hhy D:136-343 [222609]
        Other proteins in same PDB: d4hhya1, d4hhyb1, d4hhyc1, d4hhyd1
        automated match to d1gs0a2
        complexed with 15r, peg, so4
    11. Domains for 4hhz:
      1. 1940230Domain d4hhza2: 4hhz A:136-349 [222611]
        Other proteins in same PDB: d4hhza1, d4hhzb1, d4hhzc1, d4hhzd1
        automated match to d1gs0a2
        complexed with 15s, so4
      2. 1940231Domain d4hhzb2: 4hhz B:136-350 [222613]
        Other proteins in same PDB: d4hhza1, d4hhzb1, d4hhzc1, d4hhzd1
        automated match to d1gs0a2
        complexed with 15s, so4
      3. 1940232Domain d4hhzc2: 4hhz C:136-350 [222615]
        Other proteins in same PDB: d4hhza1, d4hhzb1, d4hhzc1, d4hhzd1
        automated match to d1gs0a2
        complexed with 15s, so4
      4. 1940233Domain d4hhzd2: 4hhz D:136-349 [222617]
        Other proteins in same PDB: d4hhza1, d4hhzb1, d4hhzc1, d4hhzd1
        automated match to d1gs0a2
        complexed with 15s, so4
    12. Domains for 4l6s:
      1. 1940213Domain d4l6sa2: 4l6s A:797-1011 [224570]
        Other proteins in same PDB: d4l6sa1, d4l6sb1
        automated match to d1gs0a2
        protein/DNA complex; complexed with 1wq
      2. 1940214Domain d4l6sb2: 4l6s B:797-1011 [224572]
        Other proteins in same PDB: d4l6sa1, d4l6sb1
        automated match to d1gs0a2
        protein/DNA complex; complexed with 1wq
    13. Domain for 4l6z:
    14. Domain for 4l70:
    15. Domain for 4l7l:
    16. Domain for 4l7n:
    17. Domain for 4l7o:
    18. Domain for 4l7p:
    19. Domain for 4l7r:
    20. Domain for 4l7u:
    21. Domains for 4pjt:
      1. 1940218Domain d4pjta2: 4pjt A:797-1010 [259935]
        Other proteins in same PDB: d4pjta1, d4pjtb1, d4pjtc1, d4pjtd1
        automated match to d4hhyd2
        complexed with 2yq, gol, so4
      2. 1940219Domain d4pjtb2: 4pjt B:797-1010 [263536]
        Other proteins in same PDB: d4pjta1, d4pjtb1, d4pjtc1, d4pjtd1
        automated match to d4hhyd2
        complexed with 2yq, gol, so4
      3. 1940220Domain d4pjtc2: 4pjt C:797-1010 [259939]
        Other proteins in same PDB: d4pjta1, d4pjtb1, d4pjtc1, d4pjtd1
        automated match to d4hhyd2
        complexed with 2yq, gol, so4
      4. 1940221Domain d4pjtd2: 4pjt D:797-1009 [259941]
        Other proteins in same PDB: d4pjta1, d4pjtb1, d4pjtc1, d4pjtd1
        automated match to d4hhyd2
        complexed with 2yq, gol, so4
    22. Domains for 4r6e:
      1. 1940236Domain d4r6ea2: 4r6e A:797-1010 [276726]
        Other proteins in same PDB: d4r6ea1, d4r6eb1, d4r6ec1, d4r6ed1
        automated match to d4hhyd2
        protein/DNA complex; complexed with 3jd, gol, so4
      2. 1940237Domain d4r6eb2: 4r6e B:797-1011 [276722]
        Other proteins in same PDB: d4r6ea1, d4r6eb1, d4r6ec1, d4r6ed1
        automated match to d4hhyd2
        protein/DNA complex; complexed with 3jd, gol, so4
      3. 1940238Domain d4r6ec2: 4r6e C:797-1010 [276720]
        Other proteins in same PDB: d4r6ea1, d4r6eb1, d4r6ec1, d4r6ed1
        automated match to d4hhyd2
        protein/DNA complex; complexed with 3jd, gol, so4
      4. 1940239Domain d4r6ed2: 4r6e D:797-1010 [276724]
        Other proteins in same PDB: d4r6ea1, d4r6eb1, d4r6ec1, d4r6ed1
        automated match to d4hhyd2
        protein/DNA complex; complexed with 3jd, gol, so4
    23. Domains for 4und:
      1. 1940234Domain d4unda2: 4und A:797-1010 [273924]
        Other proteins in same PDB: d4unda1, d4undb1
        automated match to d4hhyd2
        protein/DNA complex; complexed with 2yq, na
      2. 1940235Domain d4undb2: 4und B:797-1010 [273920]
        Other proteins in same PDB: d4unda1, d4undb1
        automated match to d4hhyd2
        protein/DNA complex; complexed with 2yq, na
    24. Domains for 4xhu:
      1. 1940227Domain d4xhua2: 4xhu A:797-1012 [277637]
        Other proteins in same PDB: d4xhua1, d4xhuc1
        automated match to d4hhyd2
        protein/DNA complex; complexed with act, ca, gol
      2. 1940228Domain d4xhuc2: 4xhu C:797-1009 [277640]
        Other proteins in same PDB: d4xhua1, d4xhuc1
        automated match to d4hhyd2
        protein/DNA complex; complexed with act, ca, gol
    25. Domain for 4zzz:
    26. Domain for 5a00:
  6. 1940250Salmonella enterica [TaxId:90370] [226726] (1 PDB entry)
  7. 1940252Vibrio cholerae [TaxId:666] [189511] (11 PDB entries)
    1. Domain for 2q6m:
    2. Domain for 3ess:
    3. Domain for 3ki0:
    4. Domain for 3ki1:
    5. Domain for 3ki2:
    6. Domain for 3ki3:
    7. Domain for 3ki4:
    8. Domain for 3ki5:
    9. Domain for 3ki6:
    10. Domain for 3ki7:
    11. Domain for 3ny6:

More info for Protein automated matches from d.166.1.0: automated matches

Timeline for Protein automated matches from d.166.1.0: automated matches: