Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1441943Fold d.166: ADP-ribosylation [56398] (1 superfamily)
    unusual fold
  4. 1441944Superfamily d.166.1: ADP-ribosylation [56399] (8 families) (S)
  5. 1442208Family d.166.1.0: automated matches [191650] (1 protein)
    not a true family
  6. 1442209Protein automated matches [191197] (5 species)
    not a true protein

Species:

  1. 1442210Clostridium botulinum [TaxId:1491] [230888] (1 PDB entry)
  2. 1442220Clostridium difficile [TaxId:1496] [231449] (5 PDB entries)
    1. Domains for 2wn4:
      1. 1442221Domain d2wn4a1: 2wn4 A:28-216 [231450]
        automated match to d1giqa1
      2. 1442222Domain d2wn4a2: 2wn4 A:217-420 [231451]
        automated match to d1giqa2
    2. Domains for 2wn5:
      1. 1442223Domain d2wn5a1: 2wn5 A:24-216 [231456]
        automated match to d1giqa1
      2. 1442224Domain d2wn5a2: 2wn5 A:217-420 [231457]
        automated match to d1giqa2
    3. Domains for 2wn6:
      1. 1442225Domain d2wn6a1: 2wn6 A:17-216 [231452]
        automated match to d1giqa1
        complexed with gol, ndp
      2. 1442226Domain d2wn6a2: 2wn6 A:217-420 [231455]
        automated match to d1giqa2
        complexed with gol, ndp
    4. Domains for 2wn7:
      1. 1442229Domain d2wn7a1: 2wn7 A:27-216 [231453]
        automated match to d1giqa1
        complexed with gol, nad
      2. 1442230Domain d2wn7a2: 2wn7 A:217-420 [231454]
        automated match to d1giqa2
        complexed with gol, nad
    5. Domains for 2wn8:
      1. 1442227Domain d2wn8a1: 2wn8 A:25-216 [231458]
        automated match to d1giqa1
      2. 1442228Domain d2wn8a2: 2wn8 A:217-420 [231459]
        automated match to d1giqa2
  3. 1442231Human (Homo sapiens) [TaxId:9606] [225406] (19 PDB entries)
    1. Domain for 3c49:
    2. Domain for 3c4h:
    3. Domain for 3ce0:
    4. Domain for 3fhb:
    5. Domain for 4gv0:
    6. Domain for 4gv2:
    7. Domain for 4gv4:
    8. Domains for 4gv7:
      1. 1442256Domain d4gv7a2: 4gv7 A:797-1010 [222197]
        Other proteins in same PDB: d4gv7a1, d4gv7b1, d4gv7c1, d4gv7d1
        automated match to d1gs0a2
        complexed with mew
      2. 1442257Domain d4gv7b2: 4gv7 B:797-1010 [222199]
        Other proteins in same PDB: d4gv7a1, d4gv7b1, d4gv7c1, d4gv7d1
        automated match to d1gs0a2
        complexed with mew
      3. 1442258Domain d4gv7c2: 4gv7 C:797-1010 [222201]
        Other proteins in same PDB: d4gv7a1, d4gv7b1, d4gv7c1, d4gv7d1
        automated match to d1gs0a2
        complexed with mew
      4. 1442259Domain d4gv7d2: 4gv7 D:797-1010 [222203]
        Other proteins in same PDB: d4gv7a1, d4gv7b1, d4gv7c1, d4gv7d1
        automated match to d1gs0a2
        complexed with mew
    9. Domains for 4hhy:
      1. 1442246Domain d4hhya2: 4hhy A:136-349 [222603]
        Other proteins in same PDB: d4hhya1, d4hhyb1, d4hhyc1, d4hhyd1
        automated match to d1gs0a2
        complexed with 15r, peg, so4
      2. 1442247Domain d4hhyb2: 4hhy B:136-349 [222605]
        Other proteins in same PDB: d4hhya1, d4hhyb1, d4hhyc1, d4hhyd1
        automated match to d1gs0a2
        complexed with 15r, peg, so4
      3. 1442248Domain d4hhyc2: 4hhy C:136-350 [222607]
        Other proteins in same PDB: d4hhya1, d4hhyb1, d4hhyc1, d4hhyd1
        automated match to d1gs0a2
        complexed with 15r, peg, so4
      4. 1442249Domain d4hhyd2: 4hhy D:136-343 [222609]
        Other proteins in same PDB: d4hhya1, d4hhyb1, d4hhyc1, d4hhyd1
        automated match to d1gs0a2
        complexed with 15r, peg, so4
    10. Domains for 4hhz:
      1. 1442252Domain d4hhza2: 4hhz A:136-349 [222611]
        Other proteins in same PDB: d4hhza1, d4hhzb1, d4hhzc1, d4hhzd1
        automated match to d1gs0a2
        complexed with 15s, so4
      2. 1442253Domain d4hhzb2: 4hhz B:136-350 [222613]
        Other proteins in same PDB: d4hhza1, d4hhzb1, d4hhzc1, d4hhzd1
        automated match to d1gs0a2
        complexed with 15s, so4
      3. 1442254Domain d4hhzc2: 4hhz C:136-350 [222615]
        Other proteins in same PDB: d4hhza1, d4hhzb1, d4hhzc1, d4hhzd1
        automated match to d1gs0a2
        complexed with 15s, so4
      4. 1442255Domain d4hhzd2: 4hhz D:136-349 [222617]
        Other proteins in same PDB: d4hhza1, d4hhzb1, d4hhzc1, d4hhzd1
        automated match to d1gs0a2
        complexed with 15s, so4
    11. Domains for 4l6s:
      1. 1442237Domain d4l6sa2: 4l6s A:797-1011 [224570]
        Other proteins in same PDB: d4l6sa1, d4l6sb1
        automated match to d1gs0a2
        protein/DNA complex; complexed with 1wq
      2. 1442238Domain d4l6sb2: 4l6s B:797-1011 [224572]
        Other proteins in same PDB: d4l6sa1, d4l6sb1
        automated match to d1gs0a2
        protein/DNA complex; complexed with 1wq
    12. Domain for 4l6z:
    13. Domain for 4l70:
    14. Domain for 4l7l:
    15. Domain for 4l7n:
    16. Domain for 4l7o:
    17. Domain for 4l7p:
    18. Domain for 4l7r:
    19. Domain for 4l7u:
  4. 1442261Salmonella enterica [TaxId:90370] [226726] (1 PDB entry)
  5. 1442263Vibrio cholerae [TaxId:666] [189511] (11 PDB entries)
    1. Domain for 2q6m:
    2. Domain for 3ess:
    3. Domain for 3ki0:
    4. Domain for 3ki1:
    5. Domain for 3ki2:
    6. Domain for 3ki3:
    7. Domain for 3ki4:
    8. Domain for 3ki5:
    9. Domain for 3ki6:
    10. Domain for 3ki7:
    11. Domain for 3ny6:

More info for Protein automated matches from d.166.1.0: automated matches

Timeline for Protein automated matches from d.166.1.0: automated matches: