Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2061141Fold b.52: Double psi beta-barrel [50684] (2 superfamilies)
    barrel, closed; n=6, S=10; complex topology with crossover (psi) loops
  4. 2061195Superfamily b.52.2: ADC-like [50692] (4 families) (S)
  5. 2061380Family b.52.2.0: automated matches [191648] (1 protein)
    not a true family
  6. 2061381Protein automated matches [191195] (7 species)
    not a true protein

Species:

  1. 2061382Desulfovibrio desulfuricans [TaxId:876] [255266] (3 PDB entries)
    1. Domain for 2jio:
    2. Domain for 2jiq:
    3. Domain for 2v3v:
  2. 2061386Escherichia coli K-12 [TaxId:83333] [232115] (4 PDB entries)
    1. Domain for 3egw:
    2. Domain for 3ir5:
    3. Domain for 3ir6:
    4. Domain for 3ir7:
  3. 2061391Francisella tularensis [TaxId:177416] [189506] (1 PDB entry)
  4. 2061400Fruit fly (Drosophila melanogaster) [TaxId:7227] [311438] (1 PDB entry)
  5. 2061405Human (Homo sapiens) [TaxId:9606] [255865] (6 PDB entries)
    1. Domains for 3hu1:
      1. 2061410Domain d3hu1a1: 3hu1 A:12-106 [246530]
        Other proteins in same PDB: d3hu1a2, d3hu1a3, d3hu1b2, d3hu1b3, d3hu1c2, d3hu1c3, d3hu1d2, d3hu1d3, d3hu1e2, d3hu1e3, d3hu1f2, d3hu1f3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      2. 2061411Domain d3hu1b1: 3hu1 B:12-106 [246533]
        Other proteins in same PDB: d3hu1a2, d3hu1a3, d3hu1b2, d3hu1b3, d3hu1c2, d3hu1c3, d3hu1d2, d3hu1d3, d3hu1e2, d3hu1e3, d3hu1f2, d3hu1f3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      3. 2061412Domain d3hu1c1: 3hu1 C:12-106 [246536]
        Other proteins in same PDB: d3hu1a2, d3hu1a3, d3hu1b2, d3hu1b3, d3hu1c2, d3hu1c3, d3hu1d2, d3hu1d3, d3hu1e2, d3hu1e3, d3hu1f2, d3hu1f3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      4. 2061413Domain d3hu1d1: 3hu1 D:12-106 [246539]
        Other proteins in same PDB: d3hu1a2, d3hu1a3, d3hu1b2, d3hu1b3, d3hu1c2, d3hu1c3, d3hu1d2, d3hu1d3, d3hu1e2, d3hu1e3, d3hu1f2, d3hu1f3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      5. 2061414Domain d3hu1e1: 3hu1 E:12-106 [246542]
        Other proteins in same PDB: d3hu1a2, d3hu1a3, d3hu1b2, d3hu1b3, d3hu1c2, d3hu1c3, d3hu1d2, d3hu1d3, d3hu1e2, d3hu1e3, d3hu1f2, d3hu1f3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      6. 2061415Domain d3hu1f1: 3hu1 F:12-106 [246545]
        Other proteins in same PDB: d3hu1a2, d3hu1a3, d3hu1b2, d3hu1b3, d3hu1c2, d3hu1c3, d3hu1d2, d3hu1d3, d3hu1e2, d3hu1e3, d3hu1f2, d3hu1f3
        automated match to d1e32a1
        complexed with ags, mg; mutant
    2. Domains for 3hu2:
      1. 2061416Domain d3hu2a1: 3hu2 A:12-106 [246548]
        Other proteins in same PDB: d3hu2a2, d3hu2a3, d3hu2b2, d3hu2b3, d3hu2c2, d3hu2c3, d3hu2d2, d3hu2d3, d3hu2e2, d3hu2e3, d3hu2f2, d3hu2f3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      2. 2061417Domain d3hu2b1: 3hu2 B:12-106 [246551]
        Other proteins in same PDB: d3hu2a2, d3hu2a3, d3hu2b2, d3hu2b3, d3hu2c2, d3hu2c3, d3hu2d2, d3hu2d3, d3hu2e2, d3hu2e3, d3hu2f2, d3hu2f3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      3. 2061418Domain d3hu2c1: 3hu2 C:12-106 [246554]
        Other proteins in same PDB: d3hu2a2, d3hu2a3, d3hu2b2, d3hu2b3, d3hu2c2, d3hu2c3, d3hu2d2, d3hu2d3, d3hu2e2, d3hu2e3, d3hu2f2, d3hu2f3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      4. 2061419Domain d3hu2d1: 3hu2 D:12-106 [246557]
        Other proteins in same PDB: d3hu2a2, d3hu2a3, d3hu2b2, d3hu2b3, d3hu2c2, d3hu2c3, d3hu2d2, d3hu2d3, d3hu2e2, d3hu2e3, d3hu2f2, d3hu2f3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      5. 2061420Domain d3hu2e1: 3hu2 E:12-106 [246560]
        Other proteins in same PDB: d3hu2a2, d3hu2a3, d3hu2b2, d3hu2b3, d3hu2c2, d3hu2c3, d3hu2d2, d3hu2d3, d3hu2e2, d3hu2e3, d3hu2f2, d3hu2f3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      6. 2061421Domain d3hu2f1: 3hu2 F:12-106 [246563]
        Other proteins in same PDB: d3hu2a2, d3hu2a3, d3hu2b2, d3hu2b3, d3hu2c2, d3hu2c3, d3hu2d2, d3hu2d3, d3hu2e2, d3hu2e3, d3hu2f2, d3hu2f3
        automated match to d1e32a1
        complexed with ags, mg; mutant
    3. Domains for 3hu3:
      1. 2061406Domain d3hu3a1: 3hu3 A:17-106 [246566]
        Other proteins in same PDB: d3hu3a2, d3hu3a3, d3hu3b2, d3hu3b3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      2. 2061407Domain d3hu3b1: 3hu3 B:17-106 [246569]
        Other proteins in same PDB: d3hu3a2, d3hu3a3, d3hu3b2, d3hu3b3
        automated match to d1e32a1
        complexed with ags, mg; mutant
    4. Domains for 4kln:
      1. 2061422Domain d4klna1: 4kln A:12-106 [253318]
        Other proteins in same PDB: d4klna2, d4klna3, d4klnb2, d4klnb3, d4klnc2, d4klnc3, d4klnd2, d4klnd3, d4klne2, d4klne3, d4klnf2, d4klnf3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      2. 2061423Domain d4klnb1: 4kln B:12-106 [253321]
        Other proteins in same PDB: d4klna2, d4klna3, d4klnb2, d4klnb3, d4klnc2, d4klnc3, d4klnd2, d4klnd3, d4klne2, d4klne3, d4klnf2, d4klnf3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      3. 2061424Domain d4klnc1: 4kln C:12-106 [253324]
        Other proteins in same PDB: d4klna2, d4klna3, d4klnb2, d4klnb3, d4klnc2, d4klnc3, d4klnd2, d4klnd3, d4klne2, d4klne3, d4klnf2, d4klnf3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      4. 2061425Domain d4klnd1: 4kln D:12-106 [253327]
        Other proteins in same PDB: d4klna2, d4klna3, d4klnb2, d4klnb3, d4klnc2, d4klnc3, d4klnd2, d4klnd3, d4klne2, d4klne3, d4klnf2, d4klnf3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      5. 2061426Domain d4klne1: 4kln E:12-106 [253330]
        Other proteins in same PDB: d4klna2, d4klna3, d4klnb2, d4klnb3, d4klnc2, d4klnc3, d4klnd2, d4klnd3, d4klne2, d4klne3, d4klnf2, d4klnf3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      6. 2061427Domain d4klnf1: 4kln F:12-106 [253333]
        Other proteins in same PDB: d4klna2, d4klna3, d4klnb2, d4klnb3, d4klnc2, d4klnc3, d4klnd2, d4klnd3, d4klne2, d4klne3, d4klnf2, d4klnf3
        automated match to d1e32a1
        complexed with ags, mg; mutant
    5. Domains for 4ko8:
      1. 2061408Domain d4ko8a1: 4ko8 A:14-106 [253360]
        Other proteins in same PDB: d4ko8a2, d4ko8a3, d4ko8b2, d4ko8b3
        automated match to d1e32a1
        complexed with ags, mg; mutant
      2. 2061409Domain d4ko8b1: 4ko8 B:17-106 [253363]
        Other proteins in same PDB: d4ko8a2, d4ko8a3, d4ko8b2, d4ko8b3
        automated match to d1e32a1
        complexed with ags, mg; mutant
    6. Domains for 4kod:
      1. 2061428Domain d4koda1: 4kod A:22-106 [253366]
        Other proteins in same PDB: d4koda2, d4koda3, d4kodb2, d4kodb3, d4kodc2, d4kodc3, d4kodd2, d4kodd3, d4kode2, d4kode3, d4kodf2, d4kodf3, d4kodg2, d4kodg3, d4kodh2, d4kodh3, d4kodi2, d4kodi3, d4kodj2, d4kodj3, d4kodk2, d4kodk3, d4kodl2, d4kodl3
        automated match to d1e32a1
        complexed with adp; mutant
      2. 2061429Domain d4kodb1: 4kod B:21-106 [253369]
        Other proteins in same PDB: d4koda2, d4koda3, d4kodb2, d4kodb3, d4kodc2, d4kodc3, d4kodd2, d4kodd3, d4kode2, d4kode3, d4kodf2, d4kodf3, d4kodg2, d4kodg3, d4kodh2, d4kodh3, d4kodi2, d4kodi3, d4kodj2, d4kodj3, d4kodk2, d4kodk3, d4kodl2, d4kodl3
        automated match to d1e32a1
        complexed with adp; mutant
      3. 2061430Domain d4kodc1: 4kod C:23-106 [253372]
        Other proteins in same PDB: d4koda2, d4koda3, d4kodb2, d4kodb3, d4kodc2, d4kodc3, d4kodd2, d4kodd3, d4kode2, d4kode3, d4kodf2, d4kodf3, d4kodg2, d4kodg3, d4kodh2, d4kodh3, d4kodi2, d4kodi3, d4kodj2, d4kodj3, d4kodk2, d4kodk3, d4kodl2, d4kodl3
        automated match to d1e32a1
        complexed with adp; mutant
      4. 2061431Domain d4kodd1: 4kod D:22-106 [253375]
        Other proteins in same PDB: d4koda2, d4koda3, d4kodb2, d4kodb3, d4kodc2, d4kodc3, d4kodd2, d4kodd3, d4kode2, d4kode3, d4kodf2, d4kodf3, d4kodg2, d4kodg3, d4kodh2, d4kodh3, d4kodi2, d4kodi3, d4kodj2, d4kodj3, d4kodk2, d4kodk3, d4kodl2, d4kodl3
        automated match to d1e32a1
        complexed with adp; mutant
      5. 2061432Domain d4kode1: 4kod E:23-106 [253378]
        Other proteins in same PDB: d4koda2, d4koda3, d4kodb2, d4kodb3, d4kodc2, d4kodc3, d4kodd2, d4kodd3, d4kode2, d4kode3, d4kodf2, d4kodf3, d4kodg2, d4kodg3, d4kodh2, d4kodh3, d4kodi2, d4kodi3, d4kodj2, d4kodj3, d4kodk2, d4kodk3, d4kodl2, d4kodl3
        automated match to d1e32a1
        complexed with adp; mutant
      6. 2061433Domain d4kodf1: 4kod F:23-106 [253381]
        Other proteins in same PDB: d4koda2, d4koda3, d4kodb2, d4kodb3, d4kodc2, d4kodc3, d4kodd2, d4kodd3, d4kode2, d4kode3, d4kodf2, d4kodf3, d4kodg2, d4kodg3, d4kodh2, d4kodh3, d4kodi2, d4kodi3, d4kodj2, d4kodj3, d4kodk2, d4kodk3, d4kodl2, d4kodl3
        automated match to d1e32a1
        complexed with adp; mutant
      7. 2061434Domain d4kodg1: 4kod G:23-106 [253384]
        Other proteins in same PDB: d4koda2, d4koda3, d4kodb2, d4kodb3, d4kodc2, d4kodc3, d4kodd2, d4kodd3, d4kode2, d4kode3, d4kodf2, d4kodf3, d4kodg2, d4kodg3, d4kodh2, d4kodh3, d4kodi2, d4kodi3, d4kodj2, d4kodj3, d4kodk2, d4kodk3, d4kodl2, d4kodl3
        automated match to d1e32a1
        complexed with adp; mutant
      8. 2061435Domain d4kodh1: 4kod H:22-106 [253387]
        Other proteins in same PDB: d4koda2, d4koda3, d4kodb2, d4kodb3, d4kodc2, d4kodc3, d4kodd2, d4kodd3, d4kode2, d4kode3, d4kodf2, d4kodf3, d4kodg2, d4kodg3, d4kodh2, d4kodh3, d4kodi2, d4kodi3, d4kodj2, d4kodj3, d4kodk2, d4kodk3, d4kodl2, d4kodl3
        automated match to d1e32a1
        complexed with adp; mutant
      9. 2061436Domain d4kodi1: 4kod I:20-106 [253390]
        Other proteins in same PDB: d4koda2, d4koda3, d4kodb2, d4kodb3, d4kodc2, d4kodc3, d4kodd2, d4kodd3, d4kode2, d4kode3, d4kodf2, d4kodf3, d4kodg2, d4kodg3, d4kodh2, d4kodh3, d4kodi2, d4kodi3, d4kodj2, d4kodj3, d4kodk2, d4kodk3, d4kodl2, d4kodl3
        automated match to d1e32a1
        complexed with adp; mutant
      10. 2061437Domain d4kodj1: 4kod J:18-106 [253393]
        Other proteins in same PDB: d4koda2, d4koda3, d4kodb2, d4kodb3, d4kodc2, d4kodc3, d4kodd2, d4kodd3, d4kode2, d4kode3, d4kodf2, d4kodf3, d4kodg2, d4kodg3, d4kodh2, d4kodh3, d4kodi2, d4kodi3, d4kodj2, d4kodj3, d4kodk2, d4kodk3, d4kodl2, d4kodl3
        automated match to d1e32a1
        complexed with adp; mutant
      11. 2061438Domain d4kodk1: 4kod K:23-106 [253396]
        Other proteins in same PDB: d4koda2, d4koda3, d4kodb2, d4kodb3, d4kodc2, d4kodc3, d4kodd2, d4kodd3, d4kode2, d4kode3, d4kodf2, d4kodf3, d4kodg2, d4kodg3, d4kodh2, d4kodh3, d4kodi2, d4kodi3, d4kodj2, d4kodj3, d4kodk2, d4kodk3, d4kodl2, d4kodl3
        automated match to d1e32a1
        complexed with adp; mutant
      12. 2061439Domain d4kodl1: 4kod L:18-106 [253399]
        Other proteins in same PDB: d4koda2, d4koda3, d4kodb2, d4kodb3, d4kodc2, d4kodc3, d4kodd2, d4kodd3, d4kode2, d4kode3, d4kodf2, d4kodf3, d4kodg2, d4kodg3, d4kodh2, d4kodh3, d4kodi2, d4kodi3, d4kodj2, d4kodj3, d4kodk2, d4kodk3, d4kodl2, d4kodl3
        automated match to d1e32a1
        complexed with adp; mutant
  6. 2061440Ralstonia eutropha [TaxId:381666] [226102] (2 PDB entries)
    1. Domain for 3ml1:
    2. Domain for 3o5a:
  7. 2061443Thermus thermophilus HB8 [TaxId:300852] [255891] (3 PDB entries)
    1. Domains for 3i9v:
      1. 2061446Domain d3i9v34: 3i9v 3:686-777 [246758]
        Other proteins in same PDB: d3i9v11, d3i9v12, d3i9v13, d3i9v2_, d3i9v31, d3i9v32, d3i9v33, d3i9v4_, d3i9v5_, d3i9v6_, d3i9v7_, d3i9v9_, d3i9va1, d3i9va2, d3i9va3, d3i9vb_, d3i9vc1, d3i9vc2, d3i9vc3, d3i9vd_, d3i9ve_, d3i9vf_, d3i9vg_, d3i9vh_
        automated match to d2fug31
        complexed with ca, fes, fmn, mn, sf4
      2. 2061447Domain d3i9vc4: 3i9v C:686-777 [246771]
        Other proteins in same PDB: d3i9v11, d3i9v12, d3i9v13, d3i9v2_, d3i9v31, d3i9v32, d3i9v33, d3i9v4_, d3i9v5_, d3i9v6_, d3i9v7_, d3i9v9_, d3i9va1, d3i9va2, d3i9va3, d3i9vb_, d3i9vc1, d3i9vc2, d3i9vc3, d3i9vd_, d3i9ve_, d3i9vf_, d3i9vg_, d3i9vh_
        automated match to d2fug31
        complexed with ca, fes, fmn, mn, sf4
    2. Domains for 3iam:
      1. 2061444Domain d3iam34: 3iam 3:686-777 [246784]
        Other proteins in same PDB: d3iam11, d3iam12, d3iam13, d3iam2_, d3iam31, d3iam32, d3iam33, d3iam4_, d3iam5_, d3iam6_, d3iam7_, d3iam9_, d3iama1, d3iama2, d3iama3, d3iamb_, d3iamc1, d3iamc2, d3iamc3, d3iamd_, d3iame_, d3iamf_, d3iamg_, d3iamh_
        automated match to d2fug31
        complexed with ca, fes, fmn, mg, nai, sf4
      2. 2061445Domain d3iamc4: 3iam C:686-777 [246797]
        Other proteins in same PDB: d3iam11, d3iam12, d3iam13, d3iam2_, d3iam31, d3iam32, d3iam33, d3iam4_, d3iam5_, d3iam6_, d3iam7_, d3iam9_, d3iama1, d3iama2, d3iama3, d3iamb_, d3iamc1, d3iamc2, d3iamc3, d3iamd_, d3iame_, d3iamf_, d3iamg_, d3iamh_
        automated match to d2fug31
        complexed with ca, fes, fmn, mg, nai, sf4
    3. Domains for 3ias:
      1. 2061448Domain d3ias34: 3ias 3:686-777 [246850]
        Other proteins in same PDB: d3ias11, d3ias12, d3ias13, d3ias2_, d3ias31, d3ias32, d3ias33, d3ias4_, d3ias5_, d3ias6_, d3ias7_, d3ias9_, d3iasa1, d3iasa2, d3iasa3, d3iasb_, d3iasc1, d3iasc2, d3iasc3, d3iasd_, d3iase_, d3iasf_, d3iasg_, d3iash_, d3iasj1, d3iasj2, d3iasj3, d3iask_, d3iasl1, d3iasl2, d3iasl3, d3iasm_, d3iasn_, d3iaso_, d3iasp_, d3iasq_, d3iass1, d3iass2, d3iass3, d3iast_, d3iasu1, d3iasu2, d3iasu3, d3iasv_, d3iasw_, d3iasx_, d3iasy_, d3iasz_
        automated match to d2fug31
        complexed with ca, fes, fmn, sf4
      2. 2061449Domain d3iasc4: 3ias C:686-777 [246863]
        Other proteins in same PDB: d3ias11, d3ias12, d3ias13, d3ias2_, d3ias31, d3ias32, d3ias33, d3ias4_, d3ias5_, d3ias6_, d3ias7_, d3ias9_, d3iasa1, d3iasa2, d3iasa3, d3iasb_, d3iasc1, d3iasc2, d3iasc3, d3iasd_, d3iase_, d3iasf_, d3iasg_, d3iash_, d3iasj1, d3iasj2, d3iasj3, d3iask_, d3iasl1, d3iasl2, d3iasl3, d3iasm_, d3iasn_, d3iaso_, d3iasp_, d3iasq_, d3iass1, d3iass2, d3iass3, d3iast_, d3iasu1, d3iasu2, d3iasu3, d3iasv_, d3iasw_, d3iasx_, d3iasy_, d3iasz_
        automated match to d2fug31
        complexed with ca, fes, fmn, sf4
      3. 2061450Domain d3iasl4: 3ias L:686-777 [246876]
        Other proteins in same PDB: d3ias11, d3ias12, d3ias13, d3ias2_, d3ias31, d3ias32, d3ias33, d3ias4_, d3ias5_, d3ias6_, d3ias7_, d3ias9_, d3iasa1, d3iasa2, d3iasa3, d3iasb_, d3iasc1, d3iasc2, d3iasc3, d3iasd_, d3iase_, d3iasf_, d3iasg_, d3iash_, d3iasj1, d3iasj2, d3iasj3, d3iask_, d3iasl1, d3iasl2, d3iasl3, d3iasm_, d3iasn_, d3iaso_, d3iasp_, d3iasq_, d3iass1, d3iass2, d3iass3, d3iast_, d3iasu1, d3iasu2, d3iasu3, d3iasv_, d3iasw_, d3iasx_, d3iasy_, d3iasz_
        automated match to d2fug31
        complexed with ca, fes, fmn, sf4
      4. 2061451Domain d3iasu4: 3ias U:686-777 [246889]
        Other proteins in same PDB: d3ias11, d3ias12, d3ias13, d3ias2_, d3ias31, d3ias32, d3ias33, d3ias4_, d3ias5_, d3ias6_, d3ias7_, d3ias9_, d3iasa1, d3iasa2, d3iasa3, d3iasb_, d3iasc1, d3iasc2, d3iasc3, d3iasd_, d3iase_, d3iasf_, d3iasg_, d3iash_, d3iasj1, d3iasj2, d3iasj3, d3iask_, d3iasl1, d3iasl2, d3iasl3, d3iasm_, d3iasn_, d3iaso_, d3iasp_, d3iasq_, d3iass1, d3iass2, d3iass3, d3iast_, d3iasu1, d3iasu2, d3iasu3, d3iasv_, d3iasw_, d3iasx_, d3iasy_, d3iasz_
        automated match to d2fug31
        complexed with ca, fes, fmn, sf4

More info for Protein automated matches from b.52.2.0: automated matches

Timeline for Protein automated matches from b.52.2.0: automated matches: