SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
Fold d.41: alpha/beta-Hammerhead [54664] (5 superfamilies)
core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids
Superfamily d.41.5: Molybdopterin synthase subunit MoaE [54690] (2 families)
Family d.41.5.0: automated matches [191646] (1 protein)
not a true family
Protein automated matches [191185] (4 species)
not a true protein

Species:

Aquifex aeolicus [TaxId:224324] [225400] (1 PDB entry)
- Domains for 2omd:
  1. Domain d2omda_: 2omd A: [205302]
    automated match to d2wp4b_
    complexed with cl, fmt, gol, na, trs
  2. Domain d2omdb_: 2omd B: [205303]
    automated match to d2wp4b_
    complexed with cl, fmt, gol, na, trs
Human (Homo sapiens) [TaxId:9606] [194767] (2 PDB entries)
1. Domains for 4ap8:
  1. Domain d4ap8a_: 4ap8 A: [194771]
    automated match to d2wp4b_
    complexed with edo, gol
  2. Domain d4ap8b_: 4ap8 B: [194769]
    automated match to d2wp4b_
    complexed with edo, gol
  3. Domain d4ap8c_: 4ap8 C: [194768]
    automated match to d2wp4b_
    complexed with edo, gol
  4. Domain d4ap8d_: 4ap8 D: [194770]
    automated match to d2wp4b_
    complexed with edo, gol
2. Domains for 5mpo:
  1. Domain d5mpoc_: 5mpo C: [327678]
    automated match to d4ap8a_
  2. Domain d5mpod_: 5mpo D: [327679]
    automated match to d4ap8a_
Mycobacterium tuberculosis [TaxId:1773] [189459] (1 PDB entry)
- Domains for 2wp4:
  1. Domain d2wp4a_: 2wp4 A: [169534]
    automated match to d1fm0e_
    complexed with ca, gol
  2. Domain d2wp4b_: 2wp4 B: [169535]
    automated match to d1fm0e_
    complexed with ca, gol
Staphylococcus aureus [TaxId:1280] [255555] (2 PDB entries)
1. Domain for 2q5w:
  - Domain d2q5we1: 2q5w E:2-137 [243523]
    Other proteins in same PDB: d2q5we2
    automated match to d2wp4a_
    complexed with gol
2. Domains for 2qie:
  1. Domain d2qiea_: 2qie A: [243579]
    automated match to d2wp4a_
    complexed with 8cs
  2. Domain d2qiee_: 2qie E: [243580]
    automated match to d2wp4a_
    complexed with 8cs
  3. Domain d2qieh_: 2qie H: [243581]
    automated match to d2wp4a_
    complexed with 8cs
  4. Domain d2qiek_: 2qie K: [243582]
    automated match to d2wp4a_
    complexed with 8cs

More info for Protein automated matches from d.41.5.0: automated matches

Timeline for Protein automated matches from d.41.5.0: automated matches:

Protein automated matches from d.41.5.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from d.41.5.0: automated matches appears in SCOPe 2.05
Protein automated matches from d.41.5.0: automated matches appears in SCOPe 2.07
Protein automated matches from d.41.5.0: automated matches appears in the current release, SCOPe 2.08