Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2944850Fold d.41: alpha/beta-Hammerhead [54664] (5 superfamilies)
    core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids
  4. 2945395Superfamily d.41.5: Molybdopterin synthase subunit MoaE [54690] (2 families) (S)
  5. 2945409Family d.41.5.0: automated matches [191646] (1 protein)
    not a true family
  6. 2945410Protein automated matches [191185] (7 species)
    not a true protein

Species:

  1. 2945411Aquifex aeolicus [TaxId:224324] [225400] (1 PDB entry)
  2. 2945414Burkholderia ambifaria [TaxId:398577] [397236] (1 PDB entry)
  3. 2945418Burkholderia multivorans [TaxId:395019] [420131] (1 PDB entry)
  4. 2945421Human (Homo sapiens) [TaxId:9606] [194767] (2 PDB entries)
    1. Domains for 4ap8:
      1. 2945424Domain d4ap8a_: 4ap8 A: [194771]
        automated match to d2wp4b_
        complexed with edo, gol
      2. 2945425Domain d4ap8b_: 4ap8 B: [194769]
        automated match to d2wp4b_
        complexed with edo, gol
      3. 2945426Domain d4ap8c_: 4ap8 C: [194768]
        automated match to d2wp4b_
        complexed with edo, gol
      4. 2945427Domain d4ap8d_: 4ap8 D: [194770]
        automated match to d2wp4b_
        complexed with edo, gol
    2. Domains for 5mpo:
      1. 2945422Domain d5mpoc_: 5mpo C: [327678]
        automated match to d4ap8a_
      2. 2945423Domain d5mpod_: 5mpo D: [327679]
        automated match to d4ap8a_
  5. 2945428Mycobacterium smegmatis [TaxId:246196] [364854] (1 PDB entry)
  6. 2945431Mycobacterium tuberculosis [TaxId:1773] [189459] (2 PDB entries)
    1. Domains for 2wp4:
      1. 2945432Domain d2wp4a_: 2wp4 A: [169534]
        automated match to d1fm0e_
        complexed with ca, gol
      2. 2945433Domain d2wp4b_: 2wp4 B: [169535]
        automated match to d1fm0e_
        complexed with ca, gol
    2. Domains for 6jbz:
      1. 2945434Domain d6jbza_: 6jbz A: [364856]
        automated match to d4ap8d_
        complexed with so4
      2. 2945435Domain d6jbzc_: 6jbz C: [364860]
        automated match to d4ap8d_
        complexed with so4
  7. 2945436Staphylococcus aureus [TaxId:1280] [255555] (2 PDB entries)
    1. Domain for 2q5w:
    2. Domains for 2qie:
      1. 2945438Domain d2qiea_: 2qie A: [243579]
        automated match to d2wp4a_
        complexed with 8cs
      2. 2945439Domain d2qiee_: 2qie E: [243580]
        automated match to d2wp4a_
        complexed with 8cs
      3. 2945440Domain d2qieh_: 2qie H: [243581]
        automated match to d2wp4a_
        complexed with 8cs
      4. 2945441Domain d2qiek_: 2qie K: [243582]
        automated match to d2wp4a_
        complexed with 8cs

More info for Protein automated matches from d.41.5.0: automated matches

Timeline for Protein automated matches from d.41.5.0: automated matches: