Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 3021034Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)
  3. 3024308Fold f.19: Aquaporin-like [81339] (1 superfamily)
    core: 8 helices, 2 short helices are surrounded by 6 long transmembrane helices
  4. 3024309Superfamily f.19.1: Aquaporin-like [81338] (2 families) (S)
  5. 3024310Family f.19.1.1: Aquaporin-like [56895] (5 proteins)
    duplication: consist of two similar structural parts
    automatically mapped to Pfam PF00230
  6. 3024349Protein automated matches [191175] (2 species)
    not a true protein

Species:

  1. 3024350Cow (Bos taurus) [TaxId:9913] [225041] (2 PDB entries)
    1. Domain for 1tm8:
    2. Domain for 2b6p:
  2. 3024353Escherichia coli K-12 [TaxId:83333] [189420] (3 PDB entries)
    1. Domains for 3nk5:
      1. 3024356Domain d3nk5a1: 3nk5 A:1-228 [182337]
        Other proteins in same PDB: d3nk5a2, d3nk5b2
        automated match to d1rc2a_
        complexed with bog; mutant
      2. 3024357Domain d3nk5b1: 3nk5 B:1-231 [182338]
        Other proteins in same PDB: d3nk5a2, d3nk5b2
        automated match to d1rc2a_
        complexed with bog; mutant
    2. Domains for 3nka:
      1. 3024354Domain d3nkaa1: 3nka A:1-228 [182341]
        Other proteins in same PDB: d3nkaa2, d3nkab2
        automated match to d1rc2a_
        complexed with bog, gol
      2. 3024355Domain d3nkab1: 3nka B:1-231 [182342]
        Other proteins in same PDB: d3nkaa2, d3nkab2
        automated match to d1rc2a_
        complexed with bog, gol
    3. Domains for 3nkc:
      1. 3024358Domain d3nkca1: 3nkc A:1-229 [247956]
        Other proteins in same PDB: d3nkca2, d3nkcb2
        automated match to d3nkab_
        complexed with bog
      2. 3024359Domain d3nkcb1: 3nkc B:1-230 [247957]
        Other proteins in same PDB: d3nkca2, d3nkcb2
        automated match to d3nkab_
        complexed with bog

More info for Protein automated matches from f.19.1.1: Aquaporin-like

Timeline for Protein automated matches from f.19.1.1: Aquaporin-like: