Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1449807Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)
  3. 1453554Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
    3 domains: (1) all-alpha; (2&3) alpha+beta
  4. 1453555Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families) (S)
  5. 1453642Family e.18.1.0: automated matches [191637] (1 protein)
    not a true family
  6. 1453643Protein automated matches [191173] (4 species)
    not a true protein

Species:

  1. 1453644Allochromatium vinosum [TaxId:1049] [189416] (1 PDB entry)
  2. 1453649Escherichia coli [TaxId:562] [195685] (3 PDB entries)
    1. Domains for 3uqy:
      1. 1453650Domain d3uqyl_: 3uqy L: [217495]
        automated match to d3uscl_
        complexed with cl, f3s, f4s, fco, gol, lmt, mg, ni, sf4, so4
      2. 1453651Domain d3uqym_: 3uqy M: [217496]
        automated match to d3uscl_
        complexed with cl, f3s, f4s, fco, gol, lmt, mg, ni, sf4, so4
    2. Domains for 3usc:
      1. 1453654Domain d3uscl_: 3usc L: [195687]
        automated match to d3myrd_
        complexed with 3ni, cl, f3s, fco, li, lmt, mg, sf3, sf4, so4
      2. 1453655Domain d3uscm_: 3usc M: [195686]
        automated match to d3myrd_
        complexed with 3ni, cl, f3s, fco, li, lmt, mg, sf3, sf4, so4
    3. Domains for 3use:
      1. 1453652Domain d3usel_: 3use L: [201106]
        automated match to d3uscl_
        complexed with 3ni, cl, f3s, f4s, fco, gol, li, lmt, mg, sf3, sf4, so4
      2. 1453653Domain d3usem_: 3use M: [195688]
        automated match to d3myrd_
        complexed with 3ni, cl, f3s, f4s, fco, gol, li, lmt, mg, sf3, sf4, so4
  3. 1453656Hydrogenovibrio marinus [TaxId:28885] [196125] (3 PDB entries)
    1. Domains for 3ayx:
      1. 1453657Domain d3ayxa_: 3ayx A: [198975]
        Other proteins in same PDB: d3ayxb_, d3ayxd_
        automated match to d3ayyc_
        complexed with cmo, cyn, f3s, f4s, fe2, gol, mg, ni, o, sf4
      2. 1453658Domain d3ayxc_: 3ayx C: [198976]
        Other proteins in same PDB: d3ayxb_, d3ayxd_
        automated match to d3ayyc_
        complexed with cmo, cyn, f3s, f4s, fe2, gol, mg, ni, o, sf4
    2. Domains for 3ayy:
      1. 1453661Domain d3ayya_: 3ayy A: [196127]
        Other proteins in same PDB: d3ayyb_, d3ayyd_
        automated match to d3myrd_
        complexed with 3ni, cmo, cyn, f3s, fe2, gol, mg, o, sf3, sf4
      2. 1453662Domain d3ayyc_: 3ayy C: [196126]
        Other proteins in same PDB: d3ayyb_, d3ayyd_
        automated match to d3myrd_
        complexed with 3ni, cmo, cyn, f3s, fe2, gol, mg, o, sf3, sf4
    3. Domains for 3ayz:
      1. 1453659Domain d3ayza_: 3ayz A: [198977]
        Other proteins in same PDB: d3ayzb_, d3ayzd_
        automated match to d3ayyc_
        complexed with 3ni, cmo, cyn, f3s, f4s, fe2, gol, mg, o, sf3, sf4
      2. 1453660Domain d3ayzc_: 3ayz C: [198978]
        Other proteins in same PDB: d3ayzb_, d3ayzd_
        automated match to d3ayyc_
        complexed with 3ni, cmo, cyn, f3s, f4s, fe2, gol, mg, o, sf3, sf4
  4. 1453663Ralstonia eutropha [TaxId:381666] [196117] (4 PDB entries)
    1. Domain for 3rgw:
    2. Domain for 4iub:
    3. Domain for 4iuc:
    4. Domain for 4iud:

More info for Protein automated matches from e.18.1.0: automated matches

Timeline for Protein automated matches from e.18.1.0: automated matches: