Species:

1. Bacillus subtilis [TaxId:1423] [255009] (1 PDB entry)

   • Domain for 1zk6:

     • Domain d1zk6a_: 1zk6 A: [241140] automated match to d3ui4a_

2. Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [256200] (1 PDB entry)

   • Domain for 4bf8:

     • Domain d4bf8a_: 4bf8 A: [251246] automated match to d1yata_

3. Burkholderia pseudomallei [TaxId:272560] [226139] (3 PDB entries)

   1. Domain for 2ko7:

      • Domain d2ko7a_: 2ko7 A: [242590] automated match to d2y78a_ complexed with jzf

   2. Domain for 2l2s:

      • Domain d2l2sa_: 2l2s A: [242749] automated match to d2y78a_ complexed with l2s

   3. Domain for 2y78:

      • Domain d2y78a_: 2y78 A: [207492] automated match to d4dz3b_ complexed with cl, gol, so4

4. Burkholderia pseudomallei [TaxId:28450] [255338] (1 PDB entry)

   • Domain for 2ke0:

     • Domain d2ke0a_: 2ke0 A: [242475] automated match to d2y78a_

5. Burkholderia pseudomallei [TaxId:320372] [195739] (2 PDB entries)

   1. Domains for 4dz2:

      1. Domain d4dz2a_: 4dz2 A: [201764] automated match to d4dz2b_ complexed with ca, fk5; mutant

      2. Domain d4dz2b_: 4dz2 B: [195740] automated match to d1fkla_ complexed with ca, fk5; mutant

   2. Domains for 4dz3:

      1. Domain d4dz3a_: 4dz3 A: [201765] automated match to d4dz3b_ complexed with act, ca, edo, fk5; mutant

      2. Domain d4dz3b_: 4dz3 B: [195741] automated match to d1fkla_ complexed with act, ca, edo, fk5; mutant

6. Cenarchaeum symbiosum [TaxId:46770] [255473] (2 PDB entries)

   1. Domain for 2m1i:

      • Domain d2m1ia_: 2m1i A: [243075] automated match to d3ui4a_

   2. Domain for 2rqs:

      • Domain d2rqsa_: 2rqs A: [243753] automated match to d3ui4a_

7. Escherichia coli [TaxId:1403831] [256440] (1 PDB entry)

   • Domain for 2mlx:

     • Domain d2mlxa2: 2mlx A:132-247 [256441] Other proteins in same PDB: d2mlxa1, d2mlxa3 automated match to d1w26a3

8. Escherichia coli [TaxId:562] [225399] (1 PDB entry)

   • Domains for 2p4v:

     1. Domain d2p4va2: 2p4v A:80-156 [205440] Other proteins in same PDB: d2p4va1, d2p4vb1, d2p4vc1, d2p4vd1, d2p4ve1, d2p4vf1 automated match to d1grja2

     2. Domain d2p4vb2: 2p4v B:80-156 [205442] Other proteins in same PDB: d2p4va1, d2p4vb1, d2p4vc1, d2p4vd1, d2p4ve1, d2p4vf1 automated match to d1grja2

     3. Domain d2p4vc2: 2p4v C:80-156 [205444] Other proteins in same PDB: d2p4va1, d2p4vb1, d2p4vc1, d2p4vd1, d2p4ve1, d2p4vf1 automated match to d1grja2

     4. Domain d2p4vd2: 2p4v D:80-156 [205446] Other proteins in same PDB: d2p4va1, d2p4vb1, d2p4vc1, d2p4vd1, d2p4ve1, d2p4vf1 automated match to d1grja2

     5. Domain d2p4ve2: 2p4v E:80-156 [205448] Other proteins in same PDB: d2p4va1, d2p4vb1, d2p4vc1, d2p4vd1, d2p4ve1, d2p4vf1 automated match to d1grja2

     6. Domain d2p4vf2: 2p4v F:80-156 [205450] Other proteins in same PDB: d2p4va1, d2p4vb1, d2p4vc1, d2p4vd1, d2p4ve1, d2p4vf1 automated match to d1grja2

9. Human (Homo sapiens) [TaxId:9606] [225017] (9 PDB entries)

   1. Domain for 2awg:

      • Domain d2awga_: 2awg A: [203504] automated match to d3ni6b_

   2. Domain for 2d9f:

      • Domain d2d9fa_: 2d9f A: [241524] automated match to d2awga_

   3. Domain for 2f2d:

      • Domain d2f2da_: 2f2d A: [241804] automated match to d3ey6a_

   4. Domains for 2pbc:

      1. Domain d2pbca_: 2pbc A: [243465] automated match to d4nnrb_ complexed with peg

      2. Domain d2pbcb_: 2pbc B: [243466] automated match to d4nnrb_ complexed with peg

      3. Domain d2pbcc_: 2pbc C: [243467] automated match to d4nnrb_ complexed with peg

      4. Domain d2pbcd_: 2pbc D: [243468] automated match to d4nnrb_ complexed with peg

   5. Domain for 3b7x:

      • Domain d3b7xa_: 3b7x A: [208555] automated match to d3ni6b_

   6. Domain for 3ey6:

      • Domain d3ey6a_: 3ey6 A: [209731] automated match to d3ni6b_

   7. Domain for 4c02:

      • Domain d4c02b_: 4c02 B: [219562] Other proteins in same PDB: d4c02a_ automated match to d4dz3b_ complexed with edo, flc, tak

   8. Domains for 4dip:

      1. Domain d4dipa_: 4dip A: [234318] automated match to d2y78a_ complexed with na, po4

      2. Domain d4dipb_: 4dip B: [234320] automated match to d2y78a_ complexed with na, po4

      3. Domain d4dipc_: 4dip C: [234321] automated match to d2y78a_ complexed with na, po4

      4. Domain d4dipd_: 4dip D: [234319] automated match to d2y78a_ complexed with na, po4

      5. Domain d4dipe_: 4dip E: [234322] automated match to d2y78a_ complexed with na, po4

      6. Domain d4dipf_: 4dip F: [240063] automated match to d4dipa_ complexed with na, po4

      7. Domain d4dipg_: 4dip G: [240064] automated match to d4dipa_ complexed with na, po4

      8. Domain d4diph_: 4dip H: [240065] automated match to d4dipa_ complexed with na, po4

      9. Domain d4dipi_: 4dip I: [240066] automated match to d4dipa_ complexed with na, po4

      10. Domain d4dipj_: 4dip J: [240067] automated match to d4dipa_ complexed with na, po4

   9. Domains for 4nnr:

      1. Domain d4nnra_: 4nnr A: [236624] automated match to d3kz7a_ complexed with fk5

      2. Domain d4nnrb_: 4nnr B: [236623] automated match to d3kz7a_ complexed with fk5

10. Legionella pneumophila [TaxId:446] [255596] (2 PDB entries)

    1. Domain for 2uz5:

       • Domain d2uz5a_: 2uz5 A: [243830] automated match to d3oe2a_

    2. Domain for 2vcd:

       • Domain d2vcda_: 2vcd A: [243856] automated match to d3oe2a_ complexed with rap

11. Methanocaldococcus jannaschii [TaxId:2190] [189612] (2 PDB entries)

    1. Domain for 3pr9:

       • Domain d3pr9a_: 3pr9 A: [183931] automated match to d1ix5a_

    2. Domains for 3pra:

       1. Domain d3praa_: 3pra A: [183932] automated match to d1ix5a_

       2. Domain d3prab_: 3pra B: [183933] automated match to d1ix5a_

12. Nitrosopumilus maritimus [TaxId:436308] [256402] (1 PDB entry)

    • Domain for 2m08:

      • Domain d2m08a_: 2m08 A: [256403] automated match to d2m1ia_

13. Plasmodium falciparum [TaxId:36329] [195450] (3 PDB entries)

    1. Domain for 2ofn:

       • Domain d2ofna_: 2ofn A: [243325] automated match to d3o5ea_

    2. Domains for 2vn1:

       1. Domain d2vn1a_: 2vn1 A: [198452] automated match to d2vn1b_ complexed with fk5

       2. Domain d2vn1b_: 2vn1 B: [195451] automated match to d3ni6a_ complexed with fk5

    3. Domains for 4j4n:

       1. Domain d4j4na_: 4j4n A: [227877] automated match to d2vn1b_ complexed with d44

       2. Domain d4j4nb_: 4j4n B: [227876] automated match to d2vn1b_ complexed with d44

       3. Domain d4j4nc_: 4j4n C: [227878] automated match to d2vn1b_ complexed with d44

14. Plasmodium vivax [TaxId:126793] [227874] (2 PDB entries)

    1. Domain for 4j4o:

       • Domain d4j4oa_: 4j4o A: [227875] automated match to d3ihza_ complexed with d44, gol

    2. Domains for 4jys:

       1. Domain d4jysa_: 4jys A: [240367] automated match to d4jysb_ complexed with cl, imd

       2. Domain d4jysb_: 4jys B: [236737] automated match to d4dz3b_ complexed with cl, imd

15. Plasmodium vivax [TaxId:5855] [189364] (5 PDB entries)

    1. Domain for 2ki3:

       • Domain d2ki3a_: 2ki3 A: [242519] automated match to d3ni6a_

    2. Domains for 3ihz:

       1. Domain d3ihza_: 3ihz A: [178329] automated match to d1r9ha_ complexed with fk5

       2. Domain d3ihzb_: 3ihz B: [178330] automated match to d1r9ha_ complexed with fk5

    3. Domains for 3ni6:

       1. Domain d3ni6a_: 3ni6 A: [182311] automated match to d1r9ha_ complexed with gol

       2. Domain d3ni6b_: 3ni6 B: [182312] automated match to d1r9ha_ complexed with gol

    4. Domains for 4itz:

       1. Domain d4itza_: 4itz A: [202677] automated match to d3ihza_ complexed with so4

       2. Domain d4itzb_: 4itz B: [193101] automated match to d3ni6a_ complexed with so4

    5. Domain for 4mgv:

       • Domain d4mgva_: 4mgv A: [229440] automated match to d3ihza_ complexed with d5i

16. Pseudomonas syringae [TaxId:223283] [189717] (1 PDB entry)

    • Domain for 3oe2:

      • Domain d3oe2a_: 3oe2 A: [182953] automated match to d1fd9a_ complexed with srt, tar

17. Salmonella enterica [TaxId:588858] [226427] (1 PDB entry)

    • Domains for 4g2p:

      1. Domain d4g2pa_: 4g2p A: [221670] automated match to d1eq3a_ complexed with gol, so4

      2. Domain d4g2pb_: 4g2p B: [221671] automated match to d1eq3a_ complexed with gol, so4

18. Staphylococcus aureus [TaxId:1280] [255309] (1 PDB entry)

    • Domain for 2jzv:

      • Domain d2jzva_: 2jzv A: [242325] automated match to d1j6ya_

19. Thale cress (Arabidopsis thaliana) [TaxId:3702] [225164] (2 PDB entries)

    1. Domains for 2f4e:

       1. Domain d2f4ea_: 2f4e A: [241807] automated match to d4j4oa_

       2. Domain d2f4eb_: 2f4e B: [241808] automated match to d4j4oa_

    2. Domain for 2if4:

       • Domain d2if4a1: 2if4 A:35-160 [204773] Other proteins in same PDB: d2if4a2 automated match to d1kt1a2

20. Trypanosome (Trypanosoma brucei) [TaxId:5691] [255439] (1 PDB entry)

    • Domain for 2lj4:

      • Domain d2lj4a_: 2lj4 A: [242897] automated match to d1j6ya_

More info for Protein automated matches from d.26.1.0: automated matches

Timeline for Protein automated matches from d.26.1.0: automated matches:

• Protein automated matches from d.26.1.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from d.26.1.0: automated matches appears in SCOPe 2.03
  
• Protein automated matches from d.26.1.0: automated matches appears in SCOPe 2.05
  
• Protein automated matches from d.26.1.0: automated matches appears in the current release, SCOPe 2.08