Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds) |
Fold e.11: Type II DNA topoisomerase C-terminal domain-like [56718] (1 superfamily) 4 domains: (1) toprim alpha/beta; (2) "winged helix"-like; (3) alpha+beta; (4) all-alpha |
Superfamily e.11.1: Type II DNA topoisomerase C-terminal domain-like [56719] (2 families) |
Family e.11.1.1: Type II DNA topoisomerase C-terminal domain-like [56720] (3 proteins) domain 2 contains the catalytic tyrosine residue |
Protein automated matches [191158] (6 species) not a true protein |
Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [189341] (2 PDB entries) |
Domain d3l4ja_: 3l4j A: [179936] automated match to d1bgwa_ protein/DNA complex; complexed with tsp |
Domain d3l4ka_: 3l4k A: [179937] automated match to d1bgwa_ protein/DNA complex; complexed with tsp, zn |
Colwellia psychrerythraea [TaxId:167879] [189641] (1 PDB entry) |
Domain d3lpxa_: 3lpx A: [180501] automated match to d1ab4a_ |
Domain d3lpxb_: 3lpx B: [180502] automated match to d1ab4a_ |
Escherichia coli [TaxId:562] [226047] (2 PDB entries) |
Domain d2wl2a_: 2wl2 A: [304583] automated match to d2y3pb_ protein/DNA complex; complexed with mg, sm8 |
Domain d2wl2b_: 2wl2 B: [304584] automated match to d2y3pb_ protein/DNA complex; complexed with mg, sm8 |
Domain d2y3pa_: 2y3p A: [207460] automated match to d1ab4a_ complexed with mg, sm8 |
Domain d2y3pb_: 2y3p B: [207461] automated match to d1ab4a_ complexed with mg, sm8 |
Escherichia coli [TaxId:83333] [311306] (1 PDB entry) |
Domain d3ku8a_: 3ku8 A: [305728] Other proteins in same PDB: d3ku8c_, d3ku8d_ automated match to d4elza_ complexed with cl, so4 |
Domain d3ku8b_: 3ku8 B: [305729] Other proteins in same PDB: d3ku8c_, d3ku8d_ automated match to d4elza_ complexed with cl, so4 |
Shigella flexneri [TaxId:623] [226392] (1 PDB entry) |
Domain d4elya_: 4ely A: [201857] Other proteins in same PDB: d4elyc_, d4elyd_ automated match to d1x75a1 complexed with cl, so4 |
Domain d4elyb_: 4ely B: [201858] Other proteins in same PDB: d4elyc_, d4elyd_ automated match to d1x75a1 complexed with cl, so4 |
Vibrio fischeri [TaxId:312309] [226391] (2 PDB entries) |
Timeline for Protein automated matches from e.11.1.1: Type II DNA topoisomerase C-terminal domain-like: