Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 3012399Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)
  3. 3018361Fold e.11: Type II DNA topoisomerase C-terminal domain-like [56718] (1 superfamily)
    4 domains: (1) toprim alpha/beta; (2) "winged helix"-like; (3) alpha+beta; (4) all-alpha
  4. 3018362Superfamily e.11.1: Type II DNA topoisomerase C-terminal domain-like [56719] (2 families) (S)
  5. 3018363Family e.11.1.1: Type II DNA topoisomerase C-terminal domain-like [56720] (3 proteins)
    domain 2 contains the catalytic tyrosine residue
  6. 3018388Protein automated matches [191158] (6 species)
    not a true protein

Species:

  1. 3018389Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [189341] (2 PDB entries)
    1. Domain for 3l4j:
    2. Domain for 3l4k:
  2. 3018392Colwellia psychrerythraea [TaxId:167879] [189641] (1 PDB entry)
  3. 3018395Escherichia coli [TaxId:562] [226047] (2 PDB entries)
    1. Domains for 2wl2:
      1. 3018396Domain d2wl2a_: 2wl2 A: [304583]
        automated match to d2y3pb_
        protein/DNA complex; complexed with mg, sm8
      2. 3018397Domain d2wl2b_: 2wl2 B: [304584]
        automated match to d2y3pb_
        protein/DNA complex; complexed with mg, sm8
    2. Domains for 2y3p:
      1. 3018398Domain d2y3pa_: 2y3p A: [207460]
        automated match to d1ab4a_
        complexed with mg, sm8
      2. 3018399Domain d2y3pb_: 2y3p B: [207461]
        automated match to d1ab4a_
        complexed with mg, sm8
  4. 3018400Escherichia coli [TaxId:83333] [311306] (1 PDB entry)
  5. 3018403Shigella flexneri [TaxId:623] [226392] (1 PDB entry)
  6. 3018406Vibrio fischeri [TaxId:312309] [226391] (2 PDB entries)
    1. Domains for 3kua:
      1. 3018407Domain d3kuaa1: 3kua A:363-494 [305732]
        Other proteins in same PDB: d3kuaa2, d3kuab2, d3kuac_, d3kuad_
        automated match to d4elza_
        complexed with gol
      2. 3018408Domain d3kuab1: 3kua B:363-492 [305734]
        Other proteins in same PDB: d3kuaa2, d3kuab2, d3kuac_, d3kuad_
        automated match to d4elza_
        complexed with gol
    2. Domains for 4elz:
      1. 3018409Domain d4elza1: 4elz A:363-494 [201859]
        Other proteins in same PDB: d4elza2, d4elzb2, d4elzc_, d4elzd_
        automated match to d1x75a1
        complexed with gol
      2. 3018410Domain d4elzb1: 4elz B:363-492 [201860]
        Other proteins in same PDB: d4elza2, d4elzb2, d4elzc_, d4elzd_
        automated match to d1x75a1
        complexed with gol

More info for Protein automated matches from e.11.1.1: Type II DNA topoisomerase C-terminal domain-like

Timeline for Protein automated matches from e.11.1.1: Type II DNA topoisomerase C-terminal domain-like: