SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class b: All beta proteins [48724] (176 folds)
Fold b.34: SH3-like barrel [50036] (21 superfamilies)
barrel, partly opened; n*=4, S*=8; meander
the last strand is interrupted by a turn of 3-10 helix
Superfamily b.34.13: Chromo domain-like [54160] (4 families)
SH3-like barrel is capped by a C-terminal helix
Family b.34.13.0: automated matches [191621] (1 protein)
not a true family
Protein automated matches [191139] (3 species)
not a true protein

Species:

Entamoeba (Entamoeba histolytica) [TaxId:5759] [256407] (1 PDB entry)
- Domain for 2m2l:
  - Domain d2m2la_: 2m2l A: [256408]
    automated match to d3gv6a_
Fruit fly (Drosophila melanogaster) [TaxId:7227] [189399] (4 PDB entries)
1. Domain for 2lrq:
  - Domain d2lrqa_: 2lrq A: [242982]
    automated match to d2f5ke_
2. Domains for 3m9q:
  1. Domain d3m9qa_: 3m9q A: [180976]
    automated match to d2efia1
    protein/DNA complex
  2. Domain d3m9qb_: 3m9q B: [180977]
    automated match to d2efia1
    protein/DNA complex
3. Domains for 3p7j:
  1. Domain d3p7ja_: 3p7j A: [248428]
    automated match to d2fmma_
    complexed with gol
  2. Domain d3p7jb_: 3p7j B: [248429]
    automated match to d2fmma_
    complexed with gol
4. Domain for 4quc:
  - Domain d4quca_: 4quc A: [259106]
    automated match to d3mtsa_
Human (Homo sapiens) [TaxId:9606] [189257] (7 PDB entries)
1. Domain for 2k1b:
  - Domain d2k1ba_: 2k1b A: [242342]
    automated match to d3tzda_
2. Domains for 3lwe:
  1. Domain d3lwea_: 3lwe A: [180604]
    automated match to d2dnta1
  2. Domain d3lweb_: 3lwe B: [180605]
    automated match to d2dnta1
3. Domains for 3mts:
  1. Domain d3mtsa_: 3mts A: [232954]
    automated match to d3f2ua_
  2. Domain d3mtsb_: 3mts B: [232956]
    automated match to d3f2ua_
  3. Domain d3mtsc_: 3mts C: [232955]
    automated match to d3f2ua_
4. Domains for 3ob9:
  1. Domain d3ob9a_: 3ob9 A: [182909]
    automated match to d2efia1
    complexed with nhe, so4
  2. Domain d3ob9b_: 3ob9 B: [182910]
    automated match to d2efia1
    complexed with nhe, so4
  3. Domain d3ob9c_: 3ob9 C: [182911]
    automated match to d2efia1
    complexed with nhe, so4
  4. Domain d3ob9d_: 3ob9 D: [182912]
    automated match to d2efia1
    complexed with nhe, so4
  5. Domain d3ob9e_: 3ob9 E: [182913]
    automated match to d2efia1
    complexed with nhe, so4
5. Domains for 3qo2:
  1. Domain d3qo2a_: 3qo2 A: [184543]
    automated match to d2dnta1
    protein/DNA complex; complexed with edo
  2. Domain d3qo2b_: 3qo2 B: [184544]
    automated match to d2dnta1
    protein/DNA complex; complexed with edo
  3. Domain d3qo2c_: 3qo2 C: [184545]
    automated match to d2dnta1
    protein/DNA complex; complexed with edo
  4. Domain d3qo2d_: 3qo2 D: [184546]
    automated match to d2dnta1
    protein/DNA complex; complexed with edo
6. Domains for 3r93:
  1. Domain d3r93a_: 3r93 A: [184851]
    automated match to d2dnta1
    complexed with unx
  2. Domain d3r93b_: 3r93 B: [184852]
    automated match to d2dnta1
    complexed with unx
  3. Domain d3r93c_: 3r93 C: [184853]
    automated match to d2dnta1
    complexed with unx
  4. Domain d3r93d_: 3r93 D: [184854]
    automated match to d2dnta1
    complexed with unx
7. Domain for 3svm:
  - Domain d3svma_: 3svm A: [185563]
    automated match to d2dnta1

More info for Protein automated matches from b.34.13.0: automated matches

Timeline for Protein automated matches from b.34.13.0: automated matches:

Protein automated matches from b.34.13.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from b.34.13.0: automated matches appears in SCOPe 2.04
Protein automated matches from b.34.13.0: automated matches appears in SCOPe 2.06
Protein automated matches from b.34.13.0: automated matches appears in the current release, SCOPe 2.08