Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1999890Fold a.62: Hepatitis B viral capsid (hbcag) [47851] (1 superfamily)
    5 helices; array; two long helices form a hairpin that dimerizes into a 4-helical bundle
  4. 1999891Superfamily a.62.1: Hepatitis B viral capsid (hbcag) [47852] (1 family) (S)
    automatically mapped to Pfam PF00906
  5. 1999892Family a.62.1.1: Hepatitis B viral capsid (hbcag) [47853] (2 protein domains)
  6. 1999899Protein automated matches [191131] (3 species)
    not a true protein

Species:

  1. 1999900Hepatitis b virus genotype d subtype adw [TaxId:10419] [279810] (1 PDB entry)
  2. 1999907Hepatitis B virus [TaxId:10407] [256206] (5 PDB entries)
    1. Domains for 4bmg:
      1. 1999908Domain d4bmga_: 4bmg A: [251276]
        automated match to d3kxse_
      2. 1999909Domain d4bmgb_: 4bmg B: [251277]
        automated match to d3kxse_
      3. 1999910Domain d4bmgc_: 4bmg C: [251278]
        automated match to d3kxse_
      4. 1999911Domain d4bmgd_: 4bmg D: [251279]
        automated match to d3kxse_
      5. 1999912Domain d4bmge_: 4bmg E: [251280]
        automated match to d3kxse_
      6. 1999913Domain d4bmgf_: 4bmg F: [251281]
        automated match to d3kxse_
    2. Domains for 5gmz:
      1. 2277697Domain d5gmza_: 5gmz A: [320998]
        automated match to d4bmga_
        complexed with 6xu, cl, gol, ipa; mutant
      2. 2277700Domain d5gmze_: 5gmz E: [321001]
        automated match to d4bmga_
        complexed with 6xu, cl, gol, ipa; mutant
      3. 2277708Domain d5gmzc_: 5gmz C: [321009]
        automated match to d4bmga_
        complexed with 6xu, cl, gol, ipa; mutant
    3. Domains for 5t2p:
      1. 2286816Domain d5t2pb1: 5t2p B:1-149 [330117]
        Other proteins in same PDB: d5t2pb2, d5t2pd2
        automated match to d4bmga_
        complexed with cl, dms, gol, ipa, k89; mutant
      2. 2286897Domain d5t2pd1: 5t2p D:1-149 [330198]
        Other proteins in same PDB: d5t2pb2, d5t2pd2
        automated match to d4bmga_
        complexed with cl, dms, gol, ipa, k89; mutant
      3. 2286985Domain d5t2pc_: 5t2p C: [330286]
        Other proteins in same PDB: d5t2pb2, d5t2pd2
        automated match to d4bmga_
        complexed with cl, dms, gol, ipa, k89; mutant
    4. Domains for 5wre:
      1. 2286934Domain d5wreb_: 5wre B: [330235]
        automated match to d4bmga_
        complexed with 7tl, cl, gol, ipa; mutant
      2. 2286968Domain d5wree_: 5wre E: [330269]
        automated match to d4bmga_
        complexed with 7tl, cl, gol, ipa; mutant
      3. 2286974Domain d5wrea_: 5wre A: [330275]
        automated match to d4bmga_
        complexed with 7tl, cl, gol, ipa; mutant
      4. 2286986Domain d5wrec_: 5wre C: [330287]
        automated match to d4bmga_
        complexed with 7tl, cl, gol, ipa; mutant
    5. Domains for 5wtw:
      1. 2286931Domain d5wtwa_: 5wtw A: [330232]
        automated match to d4bmgc_
        complexed with cl; mutant
      2. 2286940Domain d5wtwb_: 5wtw B: [330241]
        automated match to d4bmgc_
        complexed with cl; mutant
  3. 1999914Hepatitis b virus [TaxId:10419] [189224] (1 PDB entry)

More info for Protein automated matches from a.62.1.1: Hepatitis B viral capsid (hbcag)

Timeline for Protein automated matches from a.62.1.1: Hepatitis B viral capsid (hbcag):