Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2778062Fold b.26: SMAD/FHA domain [49878] (1 superfamily)
    sandwich; 11 strands in 2 sheets; greek-key
  4. 2778063Superfamily b.26.1: SMAD/FHA domain [49879] (5 families) (S)
    has a few short helices inserted in loops
  5. 2778206Family b.26.1.0: automated matches [191616] (1 protein)
    not a true family
  6. 2778207Protein automated matches [191125] (8 species)
    not a true protein

Species:

  1. 2778208Bdellovibrio bacteriovorus [TaxId:264462] [373359] (2 PDB entries)
    1. Domains for 6hc0:
      1. 2778211Domain d6hc0b_: 6hc0 B: [373397]
        automated match to d1r21a_
        complexed with fmt
      2. 2778212Domain d6hc0c_: 6hc0 C: [373365]
        automated match to d1r21a_
        complexed with fmt
      3. 2778213Domain d6hc0d_: 6hc0 D: [373408]
        automated match to d1r21a_
        complexed with fmt
      4. 2778214Domain d6hc0e_: 6hc0 E: [373360]
        automated match to d1r21a_
        complexed with fmt
    2. Domains for 6hc1:
      1. 2778209Domain d6hc1a_: 6hc1 A: [373434]
        automated match to d1r21a_
      2. 2778210Domain d6hc1b_: 6hc1 B: [373430]
        automated match to d1r21a_
  2. 2778215Chlamydia trachomatis [TaxId:272561] [267838] (1 PDB entry)
  3. 2778218Corynebacterium glutamicum [TaxId:196627] [258340] (1 PDB entry)
  4. 2778220Fruit fly (Drosophila melanogaster) [TaxId:7227] [225792] (1 PDB entry)
  5. 2778225Human (Homo sapiens) [TaxId:9606] [189203] (4 PDB entries)
    1. Domains for 3fm8:
      1. 2778227Domain d3fm8a_: 3fm8 A: [232175]
        automated match to d1wlna1
        complexed with so4, unx, zn
      2. 2778228Domain d3fm8b_: 3fm8 B: [232174]
        automated match to d1wlna1
        complexed with so4, unx, zn
    2. Domain for 3kt9:
    3. Domains for 3mdb:
      1. 2778231Domain d3mdba_: 3mdb A: [247639]
        automated match to d3fm8a_
        complexed with ip9, unx, zn
      2. 2778232Domain d3mdbb_: 3mdb B: [247640]
        automated match to d3fm8a_
        complexed with ip9, unx, zn
    4. Domains for 5zok:
      1. 2778229Domain d5zoka1: 5zok A:266-462 [359069]
        Other proteins in same PDB: d5zoka2, d5zokc2
        automated match to d3gmja_
        protein/DNA complex
      2. 2778230Domain d5zokc1: 5zok C:266-462 [359070]
        Other proteins in same PDB: d5zoka2, d5zokc2
        automated match to d3gmja_
        protein/DNA complex
  6. 2778233Mycobacterium smegmatis [TaxId:246196] [231587] (3 PDB entries)
    1. Domain for 6i2q:
    2. Domains for 6i2r:
      1. 2778235Domain d6i2rb_: 6i2r B: [369119]
        automated match to d4qcja_
        complexed with ca, mg, tpp; mutant
      2. 2778236Domain d6i2rd_: 6i2r D: [369123]
        automated match to d4qcja_
        complexed with ca, mg, tpp; mutant
    3. Domain for 6i2s:
  7. 2778238Mycobacterium tuberculosis [TaxId:1773] [189619] (3 PDB entries)
    1. Domain for 3oun:
    2. Domain for 3po8:
    3. Domain for 3poa:
  8. 2778242Mycobacterium tuberculosis [TaxId:83332] [255424] (2 PDB entries)
    1. Domain for 2lc1:
    2. Domain for 6i2p:

More info for Protein automated matches from b.26.1.0: automated matches

Timeline for Protein automated matches from b.26.1.0: automated matches: