Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2233472Fold d.165: Ribosome inactivating proteins (RIP) [56370] (1 superfamily)
    contains mixed beta-sheet
  4. 2233473Superfamily d.165.1: Ribosome inactivating proteins (RIP) [56371] (3 families) (S)
  5. 2233820Family d.165.1.0: automated matches [191615] (1 protein)
    not a true family
  6. 2233821Protein automated matches [191124] (7 species)
    not a true protein

Species:

  1. 2233822Bougainvillea spectabilis [311189] (1 PDB entry)
  2. 2233824Burkholderia pseudomallei [TaxId:320372] [311316] (1 PDB entry)
  3. 2233829Common soapwort (Saponaria officinalis) [TaxId:3572] [225793] (5 PDB entries)
    1. Domains for 3hiq:
      1. 2233838Domain d3hiqa1: 3hiq A:1-257 [246496]
        Other proteins in same PDB: d3hiqa2, d3hiqb2
        automated match to d3hisa_
        mutant
      2. 2233839Domain d3hiqb1: 3hiq B:1-257 [246497]
        Other proteins in same PDB: d3hiqa2, d3hiqb2
        automated match to d3hisa_
        mutant
    2. Domains for 3his:
      1. 2233830Domain d3hisa_: 3his A: [211079]
        automated match to d1bryy_
      2. 2233831Domain d3hisb_: 3his B: [211080]
        automated match to d1bryy_
    3. Domains for 3hit:
      1. 2233836Domain d3hita_: 3hit A: [211081]
        automated match to d1bryy_
        complexed with dyn
      2. 2233837Domain d3hitb_: 3hit B: [211082]
        automated match to d1bryy_
        complexed with dyn
    4. Domains for 3hiv:
      1. 2233834Domain d3hiva_: 3hiv A: [211083]
        automated match to d1bryy_
        complexed with txn
      2. 2233835Domain d3hivb_: 3hiv B: [211084]
        automated match to d1bryy_
        complexed with txn
    5. Domains for 3hiw:
      1. 2233832Domain d3hiwa_: 3hiw A: [211085]
        automated match to d1bryy_
        complexed with c2x
      2. 2233833Domain d3hiwb_: 3hiw B: [211086]
        automated match to d1bryy_
        complexed with c2x
  4. 2233840Gelonium multiflorum [TaxId:3979] [189202] (2 PDB entries)
    1. Domains for 3ktz:
      1. 2233841Domain d3ktza_: 3ktz A: [179698]
        automated match to d1uq5a_
        complexed with nag
      2. 2233842Domain d3ktzb_: 3ktz B: [179699]
        automated match to d1uq5a_
        complexed with nag
    2. Domains for 3ku0:
      1. 2233843Domain d3ku0a_: 3ku0 A: [179700]
        automated match to d1uq5a_
        complexed with ade, nag
      2. 2233844Domain d3ku0b_: 3ku0 B: [179701]
        automated match to d1uq5a_
        complexed with ade, nag
  5. 2233845Iris hollandica [TaxId:35876] [226141] (1 PDB entry)
  6. 2233848Lychnis chalcedonica [TaxId:39855] [230738] (1 PDB entry)
  7. 2233850Momordica charantia [TaxId:3673] [312311] (9 PDB entries)
    1. Domain for 4z8s:
    2. Domain for 4z9w:
    3. Domain for 4za3:
    4. Domain for 4zbv:
    5. Domain for 4zfu:
    6. Domain for 4zfw:
    7. Domain for 4zfy:
    8. Domain for 4zgr:
    9. Domain for 4zlb:

More info for Protein automated matches from d.165.1.0: automated matches

Timeline for Protein automated matches from d.165.1.0: automated matches: