Species:

1. Acetivibrio cellulolyticus [TaxId:35830] [189869] (5 PDB entries)

   1. Domain for 3zqw:

      • Domain d3zqwa1: 3zqw A:5-153 [186520] Other proteins in same PDB: d3zqwa2 automated match to d1nbca_ complexed with 1pe, ca, edo, ni

   2. Domain for 3zu8:

      • Domain d3zu8a1: 3zu8 A:5-153 [186573] Other proteins in same PDB: d3zu8a2 automated match to d1nbca_ complexed with 1pe, ca, edo, ni

   3. Domain for 3zuc:

      • Domain d3zuca1: 3zuc A:5-153 [186574] Other proteins in same PDB: d3zuca2 automated match to d1nbca_ complexed with 1pe, ca, edo, ni

   4. Domains for 4uyp:

      1. Domain d4uypa1: 4uyp A:2-143 [271529] Other proteins in same PDB: d4uypa2, d4uypa3, d4uypb_, d4uypc2, d4uypc3, d4uypd_ automated match to d4dh2a_ complexed with ca, epe, mpd, so4; mutant

      2. Domain d4uypc1: 4uyp C:2-143 [271531] Other proteins in same PDB: d4uypa2, d4uypa3, d4uypb_, d4uypc2, d4uypc3, d4uypd_ automated match to d4dh2a_ complexed with ca, epe, mpd, so4; mutant

   5. Domain for 4uyq:

      • Domain d4uyqa1: 4uyq A:2-143 [271530] Other proteins in same PDB: d4uyqa2, d4uyqa3, d4uyqb_ automated match to d4dh2a_ complexed with ca; mutant

2. Bacillus subtilis [TaxId:1423] [255415] (1 PDB entry)

   • Domain for 2l8a:

     • Domain d2l8aa1: 2l8a A:354-499 [242806] Other proteins in same PDB: d2l8aa2 automated match to d4b97a_

3. Bacillus subtilis [TaxId:224308] [392320] (2 PDB entries)

   1. Domain for 6ufv:

      • Domain d6ufva_: 6ufv A: [392321] automated match to d1nbca_ complexed with peg

   2. Domain for 6ufw:

      • Domain d6ufwa_: 6ufw A: [392358] automated match to d1nbca_

4. Bacteroides cellulosolvens [TaxId:35825] [189900] (2 PDB entries)

   1. Domain for 2xbt:

      • Domain d2xbta_: 2xbt A: [170004] automated match to d1nbca_ complexed with no3

   2. Domain for 4ums:

      • Domain d4umsa1: 4ums A:1039-1186 [272407] Other proteins in same PDB: d4umsa2 automated match to d2ccla_

5. Caldicellulosiruptor sp. [TaxId:1387557] [367999] (1 PDB entry)

   • Domains for 6d5b:

     1. Domain d6d5ba_: 6d5b A: [368016] automated match to d4jo5a_ complexed with ca

     2. Domain d6d5bb_: 6d5b B: [368027] automated match to d4jo5a_ complexed with ca

     3. Domain d6d5bc_: 6d5b C: [368104] automated match to d4jo5a_ complexed with ca

     4. Domain d6d5bd_: 6d5b D: [368059] automated match to d4jo5a_ complexed with ca

     5. Domain d6d5be_: 6d5b E: [368024] automated match to d4jo5a_ complexed with ca

     6. Domain d6d5bf_: 6d5b F: [368001] automated match to d4jo5a_ complexed with ca

     7. Domain d6d5bg_: 6d5b G: [368022] automated match to d4jo5a_ complexed with ca

     8. Domain d6d5bh_: 6d5b H: [368058] automated match to d4jo5a_ complexed with ca

     9. Domain d6d5bi_: 6d5b I: [368000] automated match to d4jo5a_ complexed with ca

     10. Domain d6d5bj_: 6d5b J: [368023] automated match to d4jo5a_ complexed with ca

     11. Domain d6d5bk_: 6d5b K: [368062] automated match to d4jo5a_ complexed with ca

     12. Domain d6d5bl_: 6d5b L: [368002] automated match to d4jo5a_ complexed with ca

6. Clostridium clariflavum [TaxId:288965] [227912] (1 PDB entry)

   • Domain for 4b96:

     • Domain d4b96a1: 4b96 A:4-151 [227913] Other proteins in same PDB: d4b96a2 automated match to d4b9fb_ complexed with ca, cl

7. Clostridium thermocellum [TaxId:1515] [189176] (12 PDB entries)

   1. Domain for 2wnx:

      • Domain d2wnxa1: 2wnx A:6-159 [169494] Other proteins in same PDB: d2wnxa2 automated match to d1g43a_ complexed with ca, fmt, so4

   2. Domain for 2wo4:

      • Domain d2wo4a1: 2wo4 A:4-159 [169504] Other proteins in same PDB: d2wo4a2 automated match to d1g43a_ complexed with ca, cl, so4

   3. Domains for 2wob:

      1. Domain d2woba1: 2wob A:11-159 [169522] Other proteins in same PDB: d2woba2, d2wobc2, d2wobe2 automated match to d1g43a_ complexed with ca

      2. Domain d2wobc1: 2wob C:9-159 [169523] Other proteins in same PDB: d2woba2, d2wobc2, d2wobe2 automated match to d1g43a_ complexed with ca

      3. Domain d2wobe1: 2wob E:8-159 [169524] Other proteins in same PDB: d2woba2, d2wobc2, d2wobe2 automated match to d1g43a_ complexed with ca

   4. Domains for 2ylk:

      1. Domain d2ylka1: 2ylk A:1-144 [198766] Other proteins in same PDB: d2ylka2 automated match to d2ylkc_

      2. Domain d2ylkb_: 2ylk B: [195486] Other proteins in same PDB: d2ylka2 automated match to d3zuca_

      3. Domain d2ylkc_: 2ylk C: [195485] Other proteins in same PDB: d2ylka2 automated match to d3zuca_

      4. Domain d2ylkd_: 2ylk D: [198767] Other proteins in same PDB: d2ylka2 automated match to d2ylkc_

   5. Domain for 3zqx:

      • Domain d3zqxa1: 3zqx A:1-145 [195484] Other proteins in same PDB: d3zqxa2 automated match to d3zuca_ complexed with ca

   6. Domain for 4b97:

      • Domain d4b97a1: 4b97 A:3-151 [227826] Other proteins in same PDB: d4b97a2 automated match to d4b9fb_ complexed with ca

   7. Domain for 4b9p:

      • Domain d4b9pa_: 4b9p A: [227824] automated match to d3zuca_ complexed with ca, zn

   8. Domains for 5gxx:

      1. Domain d5gxxa2: 5gxx A:472-628 [339457] Other proteins in same PDB: d5gxxa1, d5gxxa3, d5gxxb1 automated match to d1tf4a2 complexed with ca, cl, trs

      2. Domain d5gxxb2: 5gxx B:472-628 [339453] Other proteins in same PDB: d5gxxa1, d5gxxa3, d5gxxb1 automated match to d1tf4a2 complexed with ca, cl, trs

   9. Domains for 5gxy:

      1. Domain d5gxya2: 5gxy A:472-628 [339440] Other proteins in same PDB: d5gxya1, d5gxyb1 automated match to d1tf4a2 complexed with 7pe, bgc, br, ca, cl, trs

      2. Domain d5gxyb2: 5gxy B:472-628 [339444] Other proteins in same PDB: d5gxya1, d5gxyb1 automated match to d1tf4a2 complexed with 7pe, bgc, br, ca, cl, trs

   10. Domains for 5gxz:

       1. Domain d5gxza2: 5gxz A:472-628 [339448] Other proteins in same PDB: d5gxza1, d5gxzb1 automated match to d1tf4a2 complexed with 7pe, bgc, br, ca, cl

       2. Domain d5gxzb2: 5gxz B:472-628 [339450] Other proteins in same PDB: d5gxza1, d5gxzb1 automated match to d1tf4a2 complexed with 7pe, bgc, br, ca, cl

   11. Domains for 5gy0:

       1. Domain d5gy0a2: 5gy0 A:472-628 [339495] Other proteins in same PDB: d5gy0a1, d5gy0b1 automated match to d1tf4a2 complexed with bgc, br, ca, cl, pg4

       2. Domain d5gy0b2: 5gy0 B:472-628 [339446] Other proteins in same PDB: d5gy0a1, d5gy0b1 automated match to d1tf4a2 complexed with bgc, br, ca, cl, pg4

   12. Domains for 5gy1:

       1. Domain d5gy1a2: 5gy1 A:472-628 [339442] Other proteins in same PDB: d5gy1a1, d5gy1b1 automated match to d1tf4a2 complexed with bgc, br, ca, cl

       2. Domain d5gy1b2: 5gy1 B:472-628 [339481] Other proteins in same PDB: d5gy1a1, d5gy1b1 automated match to d1tf4a2 complexed with bgc, br, ca, cl

8. Clostridium thermocellum [TaxId:203119] [194259] (5 PDB entries)

   1. Domain for 3ul4:

      • Domain d3ul4a_: 3ul4 A: [194260] Other proteins in same PDB: d3ul4b_ automated match to d1aohb_ complexed with ca, peg, so4

   2. Domain for 4b9c:

      • Domain d4b9ca1: 4b9c A:5-150 [227825] Other proteins in same PDB: d4b9ca2 automated match to d4b9fb_ complexed with ca

   3. Domains for 4c8x:

      1. Domain d4c8xa_: 4c8x A: [228169] automated match to d4b9fb_ mutant

      2. Domain d4c8xb_: 4c8x B: [234292] automated match to d4c8xd_ mutant

      3. Domain d4c8xc_: 4c8x C: [234293] automated match to d4c8xd_ mutant

      4. Domain d4c8xd_: 4c8x D: [228168] automated match to d4b9fb_ mutant

   4. Domains for 4dh2:

      1. Domain d4dh2a1: 4dh2 A:7-162 [234314] Other proteins in same PDB: d4dh2a2, d4dh2b_, d4dh2c2, d4dh2d_ automated match to d3ul4a_ complexed with ca, so4

      2. Domain d4dh2c1: 4dh2 C:8-162 [234315] Other proteins in same PDB: d4dh2a2, d4dh2b_, d4dh2c2, d4dh2d_ automated match to d3ul4a_ complexed with ca, so4

   5. Domains for 6sl4:

      1. Domain d6sl4a_: 6sl4 A: [382468] automated match to d1g43a_ complexed with ca

      2. Domain d6sl4b_: 6sl4 B: [382422] automated match to d1g43a_ complexed with ca

      3. Domain d6sl4c_: 6sl4 C: [382416] automated match to d1g43a_ complexed with ca

9. Hungateiclostridium clariflavum [TaxId:720554] [385250] (1 PDB entry)

   • Domains for 6xx1:

     1. Domain d6xx1a_: 6xx1 A: [385281] Other proteins in same PDB: d6xx1c2, d6xx1d2 automated match to d4b9pa_

     2. Domain d6xx1b_: 6xx1 B: [385274] Other proteins in same PDB: d6xx1c2, d6xx1d2 automated match to d4b9pa_

     3. Domain d6xx1c1: 6xx1 C:22-169 [385275] Other proteins in same PDB: d6xx1c2, d6xx1d2 automated match to d4b9pa_

     4. Domain d6xx1d1: 6xx1 D:22-169 [385251] Other proteins in same PDB: d6xx1c2, d6xx1d2 automated match to d4b9pa_

10. Ruminiclostridium thermocellum [TaxId:1138384] [332524] (1 PDB entry)

    • Domain for 5g5d:

      • Domain d5g5da_: 5g5d A: [332528] Other proteins in same PDB: d5g5db1, d5g5db2 automated match to d4fl4b_ complexed with ca

11. Ruminiclostridium thermocellum [TaxId:1249482] [332429] (1 PDB entry)

    • Domain for 5k39:

      • Domain d5k39a1: 5k39 A:4-163 [332430] Other proteins in same PDB: d5k39a2, d5k39a3, d5k39b1, d5k39b2 automated match to d4fl4b_ complexed with ca

12. Ruminococcus flavefaciens [TaxId:641112] [324254] (1 PDB entry)

    • Domains for 5lxv:

      1. Domain d5lxva_: 5lxv A: [324285] automated match to d3ul4a_ complexed with ca

      2. Domain d5lxvc_: 5lxv C: [324255] automated match to d3ul4a_ complexed with ca

More info for Protein automated matches from b.2.2.0: automated matches

Timeline for Protein automated matches from b.2.2.0: automated matches:

• Protein automated matches from b.2.2.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from b.2.2.0: automated matches appears in SCOPe 2.06
  
• Protein automated matches from b.2.2.0: automated matches appears in the current release, SCOPe 2.08