Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1771693Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. 1771715Superfamily b.2.2: Carbohydrate-binding domain [49384] (4 families) (S)
  5. 1771831Family b.2.2.0: automated matches [191610] (1 protein)
    not a true family
  6. 1771832Protein automated matches [191113] (6 species)
    not a true protein

Species:

  1. 1771833Acetivibrio cellulolyticus [TaxId:35830] [189869] (5 PDB entries)
    1. Domain for 3zqw:
    2. Domain for 3zu8:
    3. Domain for 3zuc:
    4. Domains for 4uyp:
      1. 1771837Domain d4uypa_: 4uyp A: [271529]
        automated match to d4dh2a_
        complexed with ca, epe, mpd, so4; mutant
      2. 1771838Domain d4uypc_: 4uyp C: [271531]
        automated match to d4dh2a_
        complexed with ca, epe, mpd, so4; mutant
    5. Domain for 4uyq:
  2. 1771840Bacillus subtilis [TaxId:1423] [255415] (1 PDB entry)
  3. 1771842Bacteroides cellulosolvens [TaxId:35825] [189900] (2 PDB entries)
    1. Domain for 2xbt:
    2. Domain for 4ums:
  4. 1771845Clostridium clariflavum [TaxId:288965] [227912] (1 PDB entry)
  5. 1771847Clostridium thermocellum [TaxId:1515] [189176] (7 PDB entries)
    1. Domain for 2wnx:
    2. Domain for 2wo4:
    3. Domains for 2wob:
      1. 1771853Domain d2woba_: 2wob A: [169522]
        automated match to d1g43a_
        complexed with ca
      2. 1771854Domain d2wobc_: 2wob C: [169523]
        automated match to d1g43a_
        complexed with ca
      3. 1771855Domain d2wobe_: 2wob E: [169524]
        automated match to d1g43a_
        complexed with ca
    4. Domains for 2ylk:
      1. 1771856Domain d2ylka_: 2ylk A: [198766]
        automated match to d2ylkc_
      2. 1771857Domain d2ylkb_: 2ylk B: [195486]
        automated match to d3zuca_
      3. 1771858Domain d2ylkc_: 2ylk C: [195485]
        automated match to d3zuca_
      4. 1771859Domain d2ylkd_: 2ylk D: [198767]
        automated match to d2ylkc_
    5. Domain for 3zqx:
    6. Domain for 4b97:
    7. Domain for 4b9p:
  6. 1771860Clostridium thermocellum [TaxId:203119] [194259] (4 PDB entries)
    1. Domain for 3ul4:
    2. Domain for 4b9c:
    3. Domains for 4c8x:
      1. 1771864Domain d4c8xa_: 4c8x A: [228169]
        automated match to d4b9fb_
        mutant
      2. 1771865Domain d4c8xb_: 4c8x B: [234292]
        automated match to d4c8xd_
        mutant
      3. 1771866Domain d4c8xc_: 4c8x C: [234293]
        automated match to d4c8xd_
        mutant
      4. 1771867Domain d4c8xd_: 4c8x D: [228168]
        automated match to d4b9fb_
        mutant
    4. Domains for 4dh2:
      1. 1771862Domain d4dh2a_: 4dh2 A: [234314]
        Other proteins in same PDB: d4dh2b_, d4dh2d_
        automated match to d3ul4a_
        complexed with ca, so4
      2. 1771863Domain d4dh2c_: 4dh2 C: [234315]
        Other proteins in same PDB: d4dh2b_, d4dh2d_
        automated match to d3ul4a_
        complexed with ca, so4

More info for Protein automated matches from b.2.2.0: automated matches

Timeline for Protein automated matches from b.2.2.0: automated matches: