Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2468682Fold c.65: Formyltransferase [53327] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214567; strand 6 is antiparallel to the rest
  4. 2468683Superfamily c.65.1: Formyltransferase [53328] (2 families) (S)
  5. 2468798Family c.65.1.0: automated matches [191608] (1 protein)
    not a true family
  6. 2468799Protein automated matches [191110] (11 species)
    not a true protein

Species:

  1. 2468800Anaplasma phagocytophilum [TaxId:212042] [189161] (1 PDB entry)
  2. 2468805Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [226570] (2 PDB entries)
    1. Domains for 3rfo:
      1. 2468810Domain d3rfoa1: 3rfo A:1-204 [306448]
        Other proteins in same PDB: d3rfoa2, d3rfoa3, d3rfob2, d3rfob3, d3rfoc2, d3rfoc3, d3rfod2, d3rfod3
        automated match to d4iqfa1
        complexed with gol, pge, so4
      2. 2468811Domain d3rfob1: 3rfo B:1-204 [306451]
        Other proteins in same PDB: d3rfoa2, d3rfoa3, d3rfob2, d3rfob3, d3rfoc2, d3rfoc3, d3rfod2, d3rfod3
        automated match to d4iqfa1
        complexed with gol, pge, so4
      3. 2468812Domain d3rfoc1: 3rfo C:1-204 [306454]
        Other proteins in same PDB: d3rfoa2, d3rfoa3, d3rfob2, d3rfob3, d3rfoc2, d3rfoc3, d3rfod2, d3rfod3
        automated match to d4iqfa1
        complexed with gol, pge, so4
      4. 2468813Domain d3rfod1: 3rfo D:1-204 [306457]
        Other proteins in same PDB: d3rfoa2, d3rfoa3, d3rfob2, d3rfob3, d3rfoc2, d3rfoc3, d3rfod2, d3rfod3
        automated match to d4iqfa1
        complexed with gol, pge, so4
    2. Domains for 4iqf:
      1. 2468806Domain d4iqfa1: 4iqf A:1-204 [223312]
        Other proteins in same PDB: d4iqfa2, d4iqfa3, d4iqfb2, d4iqfb3, d4iqfc2, d4iqfc3, d4iqfd2, d4iqfd3
        automated match to d1fmta2
        complexed with gol, pg5, so4
      2. 2468807Domain d4iqfb1: 4iqf B:1-204 [223314]
        Other proteins in same PDB: d4iqfa2, d4iqfa3, d4iqfb2, d4iqfb3, d4iqfc2, d4iqfc3, d4iqfd2, d4iqfd3
        automated match to d1fmta2
        complexed with gol, pg5, so4
      3. 2468808Domain d4iqfc1: 4iqf C:1-204 [223316]
        Other proteins in same PDB: d4iqfa2, d4iqfa3, d4iqfb2, d4iqfb3, d4iqfc2, d4iqfc3, d4iqfd2, d4iqfd3
        automated match to d1fmta2
        complexed with gol, pg5, so4
      4. 2468809Domain d4iqfd1: 4iqf D:1-204 [223318]
        Other proteins in same PDB: d4iqfa2, d4iqfa3, d4iqfb2, d4iqfb3, d4iqfc2, d4iqfc3, d4iqfd2, d4iqfd3
        automated match to d1fmta2
        complexed with gol, pg5, so4
  3. 2468814Bacillus halodurans [TaxId:272558] [233206] (1 PDB entry)
  4. 2468817Brucella melitensis [TaxId:224914] [226345] (1 PDB entry)
  5. 2468819Campylobacter jejuni [TaxId:192222] [275366] (1 PDB entry)
  6. 2468822Coxiella burnetii [TaxId:777] [189726] (2 PDB entries)
    1. Domain for 3tqq:
    2. Domain for 3tqr:
  7. 2468825Geobacillus kaustophilus [TaxId:235909] [231809] (1 PDB entry)
  8. 2468827Pseudomonas aeruginosa [TaxId:208964] [328727] (1 PDB entry)
  9. 2468832Streptococcus pneumoniae [TaxId:170187] [268856] (1 PDB entry)
  10. 2468834Symbiobacterium toebii [TaxId:120580] [311272] (1 PDB entry)
  11. 2468836Vibrio cholerae [TaxId:666] [226045] (1 PDB entry)

More info for Protein automated matches from c.65.1.0: automated matches

Timeline for Protein automated matches from c.65.1.0: automated matches: