Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1776437Fold b.11: gamma-Crystallin-like [49694] (1 superfamily)
    sandwich; 8 strands in 2 sheets; greek-key
    duplication: has internal pseudo twofold symmetry
  4. 1776438Superfamily b.11.1: gamma-Crystallin-like [49695] (7 families) (S)
  5. 1776560Family b.11.1.0: automated matches [191607] (1 protein)
    not a true family
  6. 1776561Protein automated matches [191109] (10 species)
    not a true protein

Species:

  1. 1776562Bos taurus [TaxId:9913] [276752] (2 PDB entries)
    1. Domain for 4w9a:
    2. Domain for 4w9b:
  2. 1776565Ciona intestinalis [TaxId:7719] [225023] (1 PDB entry)
  3. 1776568Clostridium beijerinckii [TaxId:290402] [189152] (6 PDB entries)
    1. Domains for 3i9h:
      1. 1776587Domain d3i9ha_: 3i9h A: [178166]
        automated match to d1npsa_
        complexed with ca
      2. 1776588Domain d3i9hb_: 3i9h B: [178167]
        automated match to d1npsa_
        complexed with ca
      3. 1776589Domain d3i9hc_: 3i9h C: [178168]
        automated match to d1npsa_
        complexed with ca
      4. 1776590Domain d3i9hd_: 3i9h D: [178169]
        automated match to d1npsa_
        complexed with ca
      5. 1776591Domain d3i9he_: 3i9h E: [178170]
        automated match to d1npsa_
        complexed with ca
      6. 1776592Domain d3i9hf_: 3i9h F: [178171]
        automated match to d1npsa_
        complexed with ca
      7. 1776593Domain d3i9hg_: 3i9h G: [178172]
        automated match to d1npsa_
        complexed with ca
      8. 1776594Domain d3i9hh_: 3i9h H: [178173]
        automated match to d1npsa_
        complexed with ca
    2. Domain for 3iaj:
    3. Domain for 3sny:
    4. Domain for 3snz:
    5. Domains for 3so0:
      1. 1776578Domain d3so0a_: 3so0 A: [185452]
        automated match to d1npsa_
        complexed with ca; mutant
      2. 1776579Domain d3so0b_: 3so0 B: [185453]
        automated match to d1npsa_
        complexed with ca; mutant
      3. 1776580Domain d3so0c_: 3so0 C: [185454]
        automated match to d1npsa_
        complexed with ca; mutant
      4. 1776581Domain d3so0d_: 3so0 D: [185455]
        automated match to d1npsa_
        complexed with ca; mutant
      5. 1776582Domain d3so0e_: 3so0 E: [185456]
        automated match to d1npsa_
        complexed with ca; mutant
      6. 1776583Domain d3so0f_: 3so0 F: [185457]
        automated match to d1npsa_
        complexed with ca; mutant
      7. 1776584Domain d3so0g_: 3so0 G: [185458]
        automated match to d1npsa_
        complexed with ca; mutant
      8. 1776585Domain d3so0h_: 3so0 H: [185459]
        automated match to d1npsa_
        complexed with ca; mutant
    6. Domains for 3so1:
      1. 1776570Domain d3so1a_: 3so1 A: [185460]
        automated match to d1npsa_
        complexed with ca, so4; mutant
      2. 1776571Domain d3so1b_: 3so1 B: [185461]
        automated match to d1npsa_
        complexed with ca, so4; mutant
      3. 1776572Domain d3so1c_: 3so1 C: [185462]
        automated match to d1npsa_
        complexed with ca, so4; mutant
      4. 1776573Domain d3so1d_: 3so1 D: [185463]
        automated match to d1npsa_
        complexed with ca, so4; mutant
      5. 1776574Domain d3so1e_: 3so1 E: [185464]
        automated match to d1npsa_
        complexed with ca, so4; mutant
      6. 1776575Domain d3so1f_: 3so1 F: [185465]
        automated match to d1npsa_
        complexed with ca, so4; mutant
      7. 1776576Domain d3so1g_: 3so1 G: [185466]
        automated match to d1npsa_
        complexed with ca, so4; mutant
      8. 1776577Domain d3so1h_: 3so1 H: [185467]
        automated match to d1npsa_
        complexed with ca, so4; mutant
  4. 1776596Flavobacterium johnsoniae [TaxId:376686] [189150] (1 PDB entry)
  5. 1776605Geodia cydonium [TaxId:6047] [256298] (1 PDB entry)
  6. 1776607Hahella chejuensis [TaxId:349521] [255368] (1 PDB entry)
  7. 1776609Human (Homo sapiens) [TaxId:9606] [230909] (9 PDB entries)
    1. Domain for 2dad:
    2. Domains for 2jdf:
      1. 1776611Domain d2jdfa1: 2jdf A:1-85 [230910]
        automated match to d1amma1
      2. 1776612Domain d2jdfa2: 2jdf A:86-177 [230939]
        automated match to d1amma2
    3. Domain for 2jdg:
    4. Domains for 2m3t:
      1. 1776621Domain d2m3ta1: 2m3t A:1-91 [243094]
        automated match to d1i5ia1
      2. 1776622Domain d2m3ta2: 2m3t A:92-178 [243095]
        automated match to d1i5ia2
    5. Domains for 2m3u:
      1. 1776623Domain d2m3ua1: 2m3u A:1-91 [243096]
        automated match to d1i5ia1
      2. 1776624Domain d2m3ua2: 2m3u A:92-178 [243097]
        automated match to d1i5ia2
    6. Domain for 3lwk:
    7. Domains for 3qk3:
      1. 1776615Domain d3qk3a_: 3qk3 A: [248919]
        automated match to d4gr7a_
        complexed with edo, so4
      2. 1776616Domain d3qk3b_: 3qk3 B: [248920]
        automated match to d4gr7a_
        complexed with edo, so4
      3. 1776617Domain d3qk3c_: 3qk3 C: [248921]
        automated match to d4gr7a_
        complexed with edo, so4
    8. Domains for 4gr7:
      1. 1776613Domain d4gr7a_: 4gr7 A: [234493]
        automated match to d1bd7a_
        complexed with po4; mutant
      2. 1776614Domain d4gr7x_: 4gr7 X: [240162]
        automated match to d4gr7a_
        complexed with po4; mutant
    9. Domains for 4jgf:
      1. 1776619Domain d4jgfa_: 4jgf A: [240339]
        automated match to d4jgfb_
        mutant
      2. 1776620Domain d4jgfb_: 4jgf B: [234987]
        automated match to d1bd7a_
        mutant
  8. 1776626Methanosarcina acetivorans [TaxId:2214] [232522] (3 PDB entries)
    1. Domain for 2k1w:
    2. Domain for 2k1x:
    3. Domains for 3hz2:
      1. 1776627Domain d3hz2a_: 3hz2 A: [232525]
        automated match to d1ha4a_
        complexed with ca
      2. 1776628Domain d3hz2b_: 3hz2 B: [232523]
        automated match to d1ha4a_
        complexed with ca
      3. 1776629Domain d3hz2c_: 3hz2 C: [232527]
        automated match to d1ha4a_
        complexed with ca
      4. 1776630Domain d3hz2d_: 3hz2 D: [232526]
        automated match to d1ha4a_
        complexed with ca
  9. 1776633Mouse (Mus musculus) [TaxId:10090] [226633] (2 PDB entries)
    1. Domains for 2v2u:
      1. 1776636Domain d2v2ua1: 2v2u A:1-85 [227312]
        automated match to d1elpa1
      2. 1776637Domain d2v2ua2: 2v2u A:86-173 [227314]
        automated match to d1elpa2
      3. 1776638Domain d2v2ub1: 2v2u B:1-85 [227311]
        automated match to d1elpa1
      4. 1776639Domain d2v2ub2: 2v2u B:86-173 [227313]
        automated match to d1elpa2
    2. Domains for 4fd9:
      1. 1776634Domain d4fd9a_: 4fd9 A: [221150]
        automated match to d1e7na_
      2. 1776635Domain d4fd9b_: 4fd9 B: [221151]
        automated match to d1e7na_
  10. 1776640Zebrafish (Danio rerio) [TaxId:7955] [255476] (1 PDB entry)

More info for Protein automated matches from b.11.1.0: automated matches

Timeline for Protein automated matches from b.11.1.0: automated matches: