Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1304495Fold b.11: gamma-Crystallin-like [49694] (1 superfamily)
    sandwich; 8 strands in 2 sheets; greek-key
    duplication: has internal pseudo twofold symmetry
  4. 1304496Superfamily b.11.1: gamma-Crystallin-like [49695] (7 families) (S)
  5. 1304607Family b.11.1.0: automated matches [191607] (1 protein)
    not a true family
  6. 1304608Protein automated matches [191109] (6 species)
    not a true protein

Species:

  1. 1304609Ciona intestinalis [TaxId:7719] [225023] (1 PDB entry)
  2. 1304612Clostridium beijerinckii [TaxId:290402] [189152] (6 PDB entries)
    1. Domains for 3i9h:
      1. 1304631Domain d3i9ha_: 3i9h A: [178166]
        automated match to d1npsa_
        complexed with ca
      2. 1304632Domain d3i9hb_: 3i9h B: [178167]
        automated match to d1npsa_
        complexed with ca
      3. 1304633Domain d3i9hc_: 3i9h C: [178168]
        automated match to d1npsa_
        complexed with ca
      4. 1304634Domain d3i9hd_: 3i9h D: [178169]
        automated match to d1npsa_
        complexed with ca
      5. 1304635Domain d3i9he_: 3i9h E: [178170]
        automated match to d1npsa_
        complexed with ca
      6. 1304636Domain d3i9hf_: 3i9h F: [178171]
        automated match to d1npsa_
        complexed with ca
      7. 1304637Domain d3i9hg_: 3i9h G: [178172]
        automated match to d1npsa_
        complexed with ca
      8. 1304638Domain d3i9hh_: 3i9h H: [178173]
        automated match to d1npsa_
        complexed with ca
    2. Domain for 3iaj:
    3. Domain for 3sny:
    4. Domain for 3snz:
    5. Domains for 3so0:
      1. 1304622Domain d3so0a_: 3so0 A: [185452]
        automated match to d1npsa_
        complexed with ca; mutant
      2. 1304623Domain d3so0b_: 3so0 B: [185453]
        automated match to d1npsa_
        complexed with ca; mutant
      3. 1304624Domain d3so0c_: 3so0 C: [185454]
        automated match to d1npsa_
        complexed with ca; mutant
      4. 1304625Domain d3so0d_: 3so0 D: [185455]
        automated match to d1npsa_
        complexed with ca; mutant
      5. 1304626Domain d3so0e_: 3so0 E: [185456]
        automated match to d1npsa_
        complexed with ca; mutant
      6. 1304627Domain d3so0f_: 3so0 F: [185457]
        automated match to d1npsa_
        complexed with ca; mutant
      7. 1304628Domain d3so0g_: 3so0 G: [185458]
        automated match to d1npsa_
        complexed with ca; mutant
      8. 1304629Domain d3so0h_: 3so0 H: [185459]
        automated match to d1npsa_
        complexed with ca; mutant
    6. Domains for 3so1:
      1. 1304614Domain d3so1a_: 3so1 A: [185460]
        automated match to d1npsa_
        complexed with ca, so4; mutant
      2. 1304615Domain d3so1b_: 3so1 B: [185461]
        automated match to d1npsa_
        complexed with ca, so4; mutant
      3. 1304616Domain d3so1c_: 3so1 C: [185462]
        automated match to d1npsa_
        complexed with ca, so4; mutant
      4. 1304617Domain d3so1d_: 3so1 D: [185463]
        automated match to d1npsa_
        complexed with ca, so4; mutant
      5. 1304618Domain d3so1e_: 3so1 E: [185464]
        automated match to d1npsa_
        complexed with ca, so4; mutant
      6. 1304619Domain d3so1f_: 3so1 F: [185465]
        automated match to d1npsa_
        complexed with ca, so4; mutant
      7. 1304620Domain d3so1g_: 3so1 G: [185466]
        automated match to d1npsa_
        complexed with ca, so4; mutant
      8. 1304621Domain d3so1h_: 3so1 H: [185467]
        automated match to d1npsa_
        complexed with ca, so4; mutant
  3. 1304640Flavobacterium johnsoniae [TaxId:376686] [189150] (1 PDB entry)
  4. 1304649Homo sapiens [TaxId:9606] [230909] (5 PDB entries)
    1. Domains for 2jdf:
      1. 1304651Domain d2jdfa1: 2jdf A:1-85 [230910]
        automated match to d1amma1
      2. 1304652Domain d2jdfa2: 2jdf A:86-177 [230939]
        automated match to d1amma2
    2. Domain for 2jdg:
    3. Domain for 3lwk:
    4. Domain for 4gr7:
    5. Domain for 4jgf:
  5. 1304656Methanosarcina acetivorans [TaxId:2214] [232522] (1 PDB entry)
  6. 1304661Mouse (Mus musculus) [TaxId:10090] [226633] (2 PDB entries)
    1. Domains for 2v2u:
      1. 1304664Domain d2v2ua1: 2v2u A:1-85 [227312]
        automated match to d1elpa1
      2. 1304665Domain d2v2ua2: 2v2u A:86-173 [227314]
        automated match to d1elpa2
      3. 1304666Domain d2v2ub1: 2v2u B:1-85 [227311]
        automated match to d1elpa1
      4. 1304667Domain d2v2ub2: 2v2u B:86-173 [227313]
        automated match to d1elpa2
    2. Domains for 4fd9:
      1. 1304662Domain d4fd9a_: 4fd9 A: [221150]
        automated match to d1e7na_
      2. 1304663Domain d4fd9b_: 4fd9 B: [221151]
        automated match to d1e7na_

More info for Protein automated matches from b.11.1.0: automated matches

Timeline for Protein automated matches from b.11.1.0: automated matches: