Species:

1. Agrobacterium tumefaciens [TaxId:176299] [255830] (1 PDB entry)

   • Domains for 3fhm:

     1. Domain d3fhma1: 3fhm A:1-130 [246154] Other proteins in same PDB: d3fhma2, d3fhmc2 automated match to d4o9kb_ complexed with amp, nai, so4

     2. Domain d3fhmb_: 3fhm B: [246155] Other proteins in same PDB: d3fhma2, d3fhmc2 automated match to d4o9kb_ complexed with amp, nai, so4

     3. Domain d3fhmc1: 3fhm C:1-128 [246156] Other proteins in same PDB: d3fhma2, d3fhmc2 automated match to d4o9kb_ complexed with amp, nai, so4

     4. Domain d3fhmd_: 3fhm D: [246157] Other proteins in same PDB: d3fhma2, d3fhmc2 automated match to d4o9kb_ complexed with amp, nai, so4

2. Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [189253] (1 PDB entry)

   • Domain for 3lqn:

     • Domain d3lqna_: 3lqn A: [180514] automated match to d1yava3 complexed with fmt, gol, so4

3. Bacillus subtilis [TaxId:1423] [196484] (3 PDB entries)

   1. Domains for 3fv6:

      1. Domain d3fv6a_: 3fv6 A: [210197] automated match to d3fwsb_

      2. Domain d3fv6b_: 3fv6 B: [210198] automated match to d3fwsb_

   2. Domains for 3fwr:

      1. Domain d3fwra_: 3fwr A: [210247] automated match to d3fwsb_ complexed with adp

      2. Domain d3fwrb_: 3fwr B: [210248] automated match to d3fwsb_ complexed with adp

   3. Domains for 3fws:

      1. Domain d3fwsa_: 3fws A: [199421] automated match to d3fwsb_ complexed with anp, mg, po4

      2. Domain d3fwsb_: 3fws B: [196485] automated match to d3kpdb_ complexed with anp, mg, po4

4. Bacillus subtilis [TaxId:224308] [404144] (4 PDB entries)

   1. Domains for 6yj7:

      1. Domain d6yj7a_: 6yj7 A: [404218] automated match to d3lqna_ complexed with amp, cl

      2. Domain d6yj7b_: 6yj7 B: [404166] automated match to d3lqna_ complexed with amp, cl

   2. Domains for 6yj8:

      1. Domain d6yj8a_: 6yj8 A: [404176] automated match to d3lqna_ complexed with act, peg

      2. Domain d6yj8b_: 6yj8 B: [404194] automated match to d3lqna_ complexed with act, peg

   3. Domains for 6yj9:

      1. Domain d6yj9a_: 6yj9 A: [404157] automated match to d3lqna_ complexed with 4bw, cl

      2. Domain d6yj9b_: 6yj9 B: [404190] automated match to d3lqna_ complexed with 4bw, cl

   4. Domains for 6yja:

      1. Domain d6yjaa_: 6yja A: [404145] automated match to d3lqna_ complexed with 2ba, ca, cl, gol

      2. Domain d6yjab_: 6yja B: [404146] automated match to d3lqna_ complexed with 2ba, ca, cl, gol

5. Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [233658] (3 PDB entries)

   1. Domains for 3t4n:

      1. Domain d3t4nc1: 3t4n C:8-186 [233659] Other proteins in same PDB: d3t4na_ automated match to d2ooxe1 complexed with adp

      2. Domain d3t4nc2: 3t4n C:187-322 [233660] Other proteins in same PDB: d3t4na_ automated match to d2ooxe2 complexed with adp

   2. Domains for 3tdh:

      1. Domain d3tdhc1: 3tdh C:6-185 [239793] Other proteins in same PDB: d3tdha_ automated match to d3t4nc1 complexed with amp

      2. Domain d3tdhc2: 3tdh C:186-321 [239794] Other proteins in same PDB: d3tdha_ automated match to d3t4nc2 complexed with amp

   3. Domains for 3te5:

      1. Domain d3te5c1: 3te5 C:7-186 [239795] Other proteins in same PDB: d3te5a_ automated match to d3t4nc1 complexed with nai

      2. Domain d3te5c2: 3te5 C:187-322 [239796] Other proteins in same PDB: d3te5a_ automated match to d3t4nc2 complexed with nai

6. Burkholderia ambifaria [TaxId:398577] [234427] (1 PDB entry)

   • Domains for 4fry:

     1. Domain d4frya_: 4fry A: [234428] automated match to d2p9ma_ complexed with amp, nad

     2. Domain d4fryb_: 4fry B: [234429] automated match to d2p9ma_ complexed with amp, nad

7. Escherichia coli [TaxId:199310] [255834] (1 PDB entry)

   • Domains for 3fna:

     1. Domain d3fnaa_: 3fna A: [246171] automated match to d4o9kb_ complexed with amp

     2. Domain d3fnab_: 3fna B: [246172] automated match to d4o9kb_ complexed with amp

8. Human (Homo sapiens) [TaxId:9606] [231280] (4 PDB entries)

   1. Domain for 2uv4:

      • Domain d2uv4a1: 2uv4 A:182-324 [231281] Other proteins in same PDB: d2uv4a2 automated match to d2nyca1 complexed with amp

   2. Domain for 2uv5:

      • Domain d2uv5a1: 2uv5 A:182-324 [231282] Other proteins in same PDB: d2uv5a2 automated match to d2nyca1 complexed with amz

   3. Domain for 2uv6:

      • Domain d2uv6a1: 2uv6 A:182-324 [231283] Other proteins in same PDB: d2uv6a2 automated match to d2nyca1 complexed with amp

   4. Domain for 2uv7:

      • Domain d2uv7a1: 2uv7 A:182-324 [235963] Other proteins in same PDB: d2uv7a2 automated match to d2nyca1 complexed with amp

9. Klebsiella pneumoniae [TaxId:272620] [255903] (1 PDB entry)

   • Domains for 3k2v:

     1. Domain d3k2va_: 3k2v A: [247102] automated match to d4o9kb_ complexed with cmk, gol, so4

     2. Domain d3k2vb_: 3k2v B: [247103] automated match to d4o9kb_ complexed with cmk, gol, so4

10. Listeria monocytogenes [TaxId:1639] [319795] (3 PDB entries)

    1. Domains for 5ks7:

       1. Domain d5ks7a_: 5ks7 A: [319796] automated match to d2p9mb_ complexed with 2ba

       2. Domain d5ks7b_: 5ks7 B: [319867] automated match to d2p9mb_ complexed with 2ba

    2. Domains for 6xnu:

       1. Domain d6xnua_: 6xnu A: [393311] automated match to d2emqa_ complexed with cl

       2. Domain d6xnub_: 6xnu B: [393378] automated match to d2emqa_ complexed with cl

    3. Domains for 6xnv:

       1. Domain d6xnva_: 6xnv A: [393310] automated match to d2emqa_ complexed with 2ba

       2. Domain d6xnvb_: 6xnv B: [393461] automated match to d2emqa_ complexed with 2ba

11. Methanocaldococcus jannaschii [TaxId:2190] [189191] (3 PDB entries)

    1. Domains for 3kpb:

       1. Domain d3kpba_: 3kpb A: [179515] automated match to d2ef7a1 complexed with gol, sam

       2. Domain d3kpbb_: 3kpb B: [179516] automated match to d2ef7a1 complexed with gol, sam

       3. Domain d3kpbc_: 3kpb C: [179517] automated match to d2ef7a1 complexed with gol, sam

       4. Domain d3kpbd_: 3kpb D: [179518] automated match to d2ef7a1 complexed with gol, sam

    2. Domain for 3kpc:

       • Domain d3kpca_: 3kpc A: [179519] automated match to d2ef7a1 complexed with mta, sam

    3. Domains for 3kpd:

       1. Domain d3kpda_: 3kpd A: [179520] automated match to d2ef7a1 complexed with mta, sam

       2. Domain d3kpdb_: 3kpd B: [179521] automated match to d2ef7a1 complexed with mta, sam

       3. Domain d3kpdc_: 3kpd C: [179522] automated match to d2ef7a1 complexed with mta, sam

       4. Domain d3kpdd_: 3kpd D: [179523] automated match to d2ef7a1 complexed with mta, sam

12. Methanocaldococcus jannaschii [TaxId:243232] [194300] (1 PDB entry)

    • Domains for 2p9m:

      1. Domain d2p9ma_: 2p9m A: [198243] automated match to d2p9md_

      2. Domain d2p9mb_: 2p9m B: [198244] automated match to d2p9md_

      3. Domain d2p9mc_: 2p9m C: [198245] automated match to d2p9md_

      4. Domain d2p9md_: 2p9m D: [194301] automated match to d3kpca_

13. Methylococcus capsulatus [TaxId:243233] [236260] (1 PDB entry)

    • Domains for 4o9k:

      1. Domain d4o9ka_: 4o9k A: [240674] automated match to d4o9kb_ complexed with cmk, gol

      2. Domain d4o9kb_: 4o9k B: [236261] automated match to d1pbja3 complexed with cmk, gol

14. Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [189092] (2 PDB entries)

    1. Domains for 3ctu:

       1. Domain d3ctua1: 3ctu A:1-143 [305171] Other proteins in same PDB: d3ctua2, d3ctub2 automated match to d3k6eb_ complexed with gol, po4

       2. Domain d3ctub1: 3ctu B:1-150 [305173] Other proteins in same PDB: d3ctua2, d3ctub2 automated match to d3k6eb_ complexed with gol, po4

    2. Domains for 3k6e:

       1. Domain d3k6ea1: 3k6e A:1-143 [179129] Other proteins in same PDB: d3k6ea2, d3k6eb2 automated match to d1yava3 complexed with po4

       2. Domain d3k6eb1: 3k6e B:1-151 [179130] Other proteins in same PDB: d3k6ea2, d3k6eb2 automated match to d1yava3 complexed with po4

15. Thale cress (Arabidopsis thaliana) [TaxId:3702] [224925] (4 PDB entries)

    1. Domains for 3sl7:

       1. Domain d3sl7a1: 3sl7 A:76-232 [233554] Other proteins in same PDB: d3sl7a2, d3sl7a3, d3sl7b2, d3sl7b3 automated match to d4gqya_ complexed with act, gol

       2. Domain d3sl7b1: 3sl7 B:76-232 [233555] Other proteins in same PDB: d3sl7a2, d3sl7a3, d3sl7b2, d3sl7b3 automated match to d4gqya_ complexed with act, gol

    2. Domain for 4gqv:

       • Domain d4gqva_: 4gqv A: [234488] automated match to d4gqya_

    3. Domain for 4gqw:

       • Domain d4gqwa_: 4gqw A: [234489] automated match to d4gqya_

    4. Domains for 4gqy:

       1. Domain d4gqya_: 4gqy A: [222096] automated match to d2p9md_ complexed with amp

       2. Domain d4gqyb_: 4gqy B: [234490] automated match to d4gqya_ complexed with amp

       3. Domain d4gqyc_: 4gqy C: [234492] automated match to d4gqya_ complexed with amp

       4. Domain d4gqyd_: 4gqy D: [234491] automated match to d4gqya_ complexed with amp

More info for Protein automated matches from d.37.1.0: automated matches

Timeline for Protein automated matches from d.37.1.0: automated matches:

• Protein automated matches from d.37.1.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from d.37.1.0: automated matches appears in SCOPe 2.06
  
• Protein automated matches from d.37.1.0: automated matches appears in the current release, SCOPe 2.08