Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2511352Fold d.37: CBS-domain pair [54630] (1 superfamily)
    duplication: tandem repeat of two beta-X-beta-alpha-beta(2)-alpha motifs of similar sequences; 4 layers: a/b/b/a
  4. 2511353Superfamily d.37.1: CBS-domain pair [54631] (2 families) (S)
  5. 2511540Family d.37.1.0: automated matches [191603] (1 protein)
    not a true family
  6. 2511541Protein automated matches [191100] (14 species)
    not a true protein

Species:

  1. 2511542Agrobacterium tumefaciens [TaxId:176299] [255830] (1 PDB entry)
  2. 2511547Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [189253] (1 PDB entry)
  3. 2511549Bacillus subtilis [TaxId:1423] [196484] (3 PDB entries)
    1. Domains for 3fv6:
      1. 2511550Domain d3fv6a_: 3fv6 A: [210197]
        automated match to d3fwsb_
      2. 2511551Domain d3fv6b_: 3fv6 B: [210198]
        automated match to d3fwsb_
    2. Domains for 3fwr:
      1. 2511554Domain d3fwra_: 3fwr A: [210247]
        automated match to d3fwsb_
        complexed with adp
      2. 2511555Domain d3fwrb_: 3fwr B: [210248]
        automated match to d3fwsb_
        complexed with adp
    3. Domains for 3fws:
      1. 2511552Domain d3fwsa_: 3fws A: [199421]
        automated match to d3fwsb_
        complexed with anp, mg, po4
      2. 2511553Domain d3fwsb_: 3fws B: [196485]
        automated match to d3kpdb_
        complexed with anp, mg, po4
  4. 2511556Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [233658] (3 PDB entries)
    1. Domains for 3t4n:
      1. 2511557Domain d3t4nc1: 3t4n C:8-186 [233659]
        Other proteins in same PDB: d3t4na_
        automated match to d2ooxe1
        complexed with adp
      2. 2511558Domain d3t4nc2: 3t4n C:187-322 [233660]
        Other proteins in same PDB: d3t4na_
        automated match to d2ooxe2
        complexed with adp
    2. Domains for 3tdh:
      1. 2511559Domain d3tdhc1: 3tdh C:6-185 [239793]
        Other proteins in same PDB: d3tdha_
        automated match to d3t4nc1
        complexed with amp
      2. 2511560Domain d3tdhc2: 3tdh C:186-321 [239794]
        Other proteins in same PDB: d3tdha_
        automated match to d3t4nc2
        complexed with amp
    3. Domains for 3te5:
      1. 2511561Domain d3te5c1: 3te5 C:7-186 [239795]
        Other proteins in same PDB: d3te5a_
        automated match to d3t4nc1
        complexed with nai
      2. 2511562Domain d3te5c2: 3te5 C:187-322 [239796]
        Other proteins in same PDB: d3te5a_
        automated match to d3t4nc2
        complexed with nai
  5. 2511563Burkholderia ambifaria [TaxId:398577] [234427] (1 PDB entry)
  6. 2511566Escherichia coli [TaxId:199310] [255834] (1 PDB entry)
  7. 2511569Human (Homo sapiens) [TaxId:9606] [231280] (4 PDB entries)
    1. Domain for 2uv4:
    2. Domain for 2uv5:
    3. Domain for 2uv6:
    4. Domain for 2uv7:
  8. 2511574Klebsiella pneumoniae [TaxId:272620] [255903] (1 PDB entry)
  9. 2511577Listeria monocytogenes [TaxId:1639] [319795] (1 PDB entry)
  10. 2511580Methanocaldococcus jannaschii [TaxId:2190] [189191] (3 PDB entries)
    1. Domains for 3kpb:
      1. 2511581Domain d3kpba_: 3kpb A: [179515]
        automated match to d2ef7a1
        complexed with gol, sam
      2. 2511582Domain d3kpbb_: 3kpb B: [179516]
        automated match to d2ef7a1
        complexed with gol, sam
      3. 2511583Domain d3kpbc_: 3kpb C: [179517]
        automated match to d2ef7a1
        complexed with gol, sam
      4. 2511584Domain d3kpbd_: 3kpb D: [179518]
        automated match to d2ef7a1
        complexed with gol, sam
    2. Domain for 3kpc:
    3. Domains for 3kpd:
      1. 2511586Domain d3kpda_: 3kpd A: [179520]
        automated match to d2ef7a1
        complexed with mta, sam
      2. 2511587Domain d3kpdb_: 3kpd B: [179521]
        automated match to d2ef7a1
        complexed with mta, sam
      3. 2511588Domain d3kpdc_: 3kpd C: [179522]
        automated match to d2ef7a1
        complexed with mta, sam
      4. 2511589Domain d3kpdd_: 3kpd D: [179523]
        automated match to d2ef7a1
        complexed with mta, sam
  11. 2511590Methanocaldococcus jannaschii [TaxId:243232] [194300] (1 PDB entry)
  12. 2511595Methylococcus capsulatus [TaxId:243233] [236260] (1 PDB entry)
  13. 2511598Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [189092] (2 PDB entries)
    1. Domains for 3ctu:
      1. 2511599Domain d3ctua1: 3ctu A:1-143 [305171]
        Other proteins in same PDB: d3ctua2, d3ctub2
        automated match to d3k6eb_
        complexed with gol, po4
      2. 2511600Domain d3ctub1: 3ctu B:1-150 [305173]
        Other proteins in same PDB: d3ctua2, d3ctub2
        automated match to d3k6eb_
        complexed with gol, po4
    2. Domains for 3k6e:
      1. 2511601Domain d3k6ea1: 3k6e A:1-143 [179129]
        Other proteins in same PDB: d3k6ea2, d3k6eb2
        automated match to d1yava3
        complexed with po4
      2. 2511602Domain d3k6eb1: 3k6e B:1-151 [179130]
        Other proteins in same PDB: d3k6ea2, d3k6eb2
        automated match to d1yava3
        complexed with po4
  14. 2511603Thale cress (Arabidopsis thaliana) [TaxId:3702] [224925] (4 PDB entries)
    1. Domains for 3sl7:
      1. 2511604Domain d3sl7a1: 3sl7 A:76-232 [233554]
        Other proteins in same PDB: d3sl7a2, d3sl7a3, d3sl7b2, d3sl7b3
        automated match to d4gqya_
        complexed with act, gol
      2. 2511605Domain d3sl7b1: 3sl7 B:76-232 [233555]
        Other proteins in same PDB: d3sl7a2, d3sl7a3, d3sl7b2, d3sl7b3
        automated match to d4gqya_
        complexed with act, gol
    2. Domain for 4gqv:
    3. Domain for 4gqw:
    4. Domains for 4gqy:
      1. 2511606Domain d4gqya_: 4gqy A: [222096]
        automated match to d2p9md_
        complexed with amp
      2. 2511607Domain d4gqyb_: 4gqy B: [234490]
        automated match to d4gqya_
        complexed with amp
      3. 2511608Domain d4gqyc_: 4gqy C: [234492]
        automated match to d4gqya_
        complexed with amp
      4. 2511609Domain d4gqyd_: 4gqy D: [234491]
        automated match to d4gqya_
        complexed with amp

More info for Protein automated matches from d.37.1.0: automated matches

Timeline for Protein automated matches from d.37.1.0: automated matches: