Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2076966Fold b.122: PUA domain-like [88696] (1 superfamily)
    pseudobarrel; mixed folded sheet of 5 strands; order 13452; strand 1 and 3 are parallel to each other
  4. 2076967Superfamily b.122.1: PUA domain-like [88697] (14 families) (S)
  5. 2077225Family b.122.1.0: automated matches [191599] (1 protein)
    not a true family
  6. 2077226Protein automated matches [191089] (7 species)
    not a true protein

Species:

  1. 2077227Allochromatium vinosum [TaxId:572477] [226588] (1 PDB entry)
  2. 2077230Escherichia coli K-12 [TaxId:83333] [226465] (1 PDB entry)
  3. 2077232Human (Homo sapiens) [TaxId:9606] [189059] (2 PDB entries)
    1. Domains for 2qjf:
      1. 2077233Domain d2qjfa1: 2qjf A:233-392 [205827]
        Other proteins in same PDB: d2qjfa2, d2qjfb2
        automated match to d1jhda1
        complexed with adx, k
      2. 2077234Domain d2qjfb1: 2qjf B:232-392 [205829]
        Other proteins in same PDB: d2qjfa2, d2qjfb2
        automated match to d1jhda1
        complexed with adx, k
    2. Domains for 3eop:
      1. 2077235Domain d3eopa1: 3eop A:55-221 [175137]
        Other proteins in same PDB: d3eopa2, d3eopb2
        automated match to d2ar1a1
        complexed with so4
      2. 2077236Domain d3eopb1: 3eop B:55-221 [175138]
        Other proteins in same PDB: d3eopa2, d3eopb2
        automated match to d2ar1a1
        complexed with so4
  4. 2077237Pyrococcus abyssi [TaxId:29292] [225092] (1 PDB entry)
  5. 2077240Pyrococcus furiosus [TaxId:2261] [225693] (3 PDB entries)
    1. Domain for 2rfk:
    2. Domain for 3hjw:
    3. Domain for 3mqk:
  6. 2077244Soybean (Glycine max) [TaxId:3847] [237646] (1 PDB entry)
  7. 2297947Legionella pneumophila [TaxId:446] [341248] (2 PDB entries)
    1. Domains for 5o95:
      1. 2297948Domain d5o95d1: 5o95 D:4-75 [341249]
        Other proteins in same PDB: d5o95a2, d5o95b2, d5o95b3, d5o95c2, d5o95c3, d5o95d2
        automated match to d4e8ba1
      2. 2297954Domain d5o95a1: 5o95 A:3-75 [341255]
        Other proteins in same PDB: d5o95a2, d5o95b2, d5o95b3, d5o95c2, d5o95c3, d5o95d2
        automated match to d4e8ba1
      3. 2297981Domain d5o95b1: 5o95 B:2-75 [341282]
        Other proteins in same PDB: d5o95a2, d5o95b2, d5o95b3, d5o95c2, d5o95c3, d5o95d2
        automated match to d4e8ba1
      4. 2297984Domain d5o95c1: 5o95 C:2-75 [341285]
        Other proteins in same PDB: d5o95a2, d5o95b2, d5o95b3, d5o95c2, d5o95c3, d5o95d2
        automated match to d4e8ba1
    2. Domains for 5o96:
      1. 2297952Domain d5o96e1: 5o96 E:3-75 [341253]
        Other proteins in same PDB: d5o96a2, d5o96b2, d5o96c2, d5o96d2, d5o96e2, d5o96f2, d5o96g2, d5o96h2
        automated match to d4e8ba1
        protein/RNA complex; complexed with sam
      2. 2297960Domain d5o96f1: 5o96 F:3-75 [341261]
        Other proteins in same PDB: d5o96a2, d5o96b2, d5o96c2, d5o96d2, d5o96e2, d5o96f2, d5o96g2, d5o96h2
        automated match to d4e8ba1
        protein/RNA complex; complexed with sam
      3. 2297963Domain d5o96b1: 5o96 B:3-75 [341264]
        Other proteins in same PDB: d5o96a2, d5o96b2, d5o96c2, d5o96d2, d5o96e2, d5o96f2, d5o96g2, d5o96h2
        automated match to d4e8ba1
        protein/RNA complex; complexed with sam
      4. 2297965Domain d5o96h1: 5o96 H:3-75 [341266]
        Other proteins in same PDB: d5o96a2, d5o96b2, d5o96c2, d5o96d2, d5o96e2, d5o96f2, d5o96g2, d5o96h2
        automated match to d4e8ba1
        protein/RNA complex; complexed with sam
      5. 2297967Domain d5o96a1: 5o96 A:3-75 [341268]
        Other proteins in same PDB: d5o96a2, d5o96b2, d5o96c2, d5o96d2, d5o96e2, d5o96f2, d5o96g2, d5o96h2
        automated match to d4e8ba1
        protein/RNA complex; complexed with sam
      6. 2298029Domain d5o96d1: 5o96 D:2-75 [341330]
        Other proteins in same PDB: d5o96a2, d5o96b2, d5o96c2, d5o96d2, d5o96e2, d5o96f2, d5o96g2, d5o96h2
        automated match to d4e8ba1
        protein/RNA complex; complexed with sam
      7. 2298031Domain d5o96c1: 5o96 C:3-75 [341332]
        Other proteins in same PDB: d5o96a2, d5o96b2, d5o96c2, d5o96d2, d5o96e2, d5o96f2, d5o96g2, d5o96h2
        automated match to d4e8ba1
        protein/RNA complex; complexed with sam
      8. 2298102Domain d5o96g1: 5o96 G:3-75 [341403]
        Other proteins in same PDB: d5o96a2, d5o96b2, d5o96c2, d5o96d2, d5o96e2, d5o96f2, d5o96g2, d5o96h2
        automated match to d4e8ba1
        protein/RNA complex; complexed with sam

More info for Protein automated matches from b.122.1.0: automated matches

Timeline for Protein automated matches from b.122.1.0: automated matches: