Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2555938Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2562704Superfamily d.58.56: CcmK-like [143414] (2 families) (S)
    contains extra C-terminal helix; forms compact hexameric 'tiles' of hexagonal shape
  5. 2562705Family d.58.56.1: CcmK-like [143415] (4 proteins)
    Pfam PF00936; BMC domain
  6. 2562739Protein automated matches [191074] (7 species)
    not a true protein

Species:

  1. 2562740Halothece sp. [TaxId:65093] [350926] (1 PDB entry)
  2. 2562747Halothiobacillus neapolitanus [TaxId:927] [188983] (1 PDB entry)
  3. 2562749Synechococcus elongatus [TaxId:1140] [259235] (2 PDB entries)
    1. Domains for 4ox6:
      1. 2562750Domain d4ox6a1: 4ox6 A:1-102 [263361]
        Other proteins in same PDB: d4ox6a2
        automated match to d2a10c_
      2. 2562751Domain d4ox6b_: 4ox6 B: [259236]
        Other proteins in same PDB: d4ox6a2
        automated match to d2a10c_
    2. Domains for 4ox7:
      1. 2562752Domain d4ox7a_: 4ox7 A: [259237]
        automated match to d3ssqa_
      2. 2562753Domain d4ox7b_: 4ox7 B: [263362]
        automated match to d4ox7a_
      3. 2562754Domain d4ox7c_: 4ox7 C: [263363]
        automated match to d4ox7a_
      4. 2562755Domain d4ox7d_: 4ox7 D: [263364]
        automated match to d4ox7a_
      5. 2562756Domain d4ox7e_: 4ox7 E: [263365]
        automated match to d4ox7a_
      6. 2562757Domain d4ox7f_: 4ox7 F: [263366]
        automated match to d4ox7a_
  4. 2562758Synechocystis sp. [TaxId:1111708] [235887] (2 PDB entries)
    1. Domains for 4liw:
      1. 2562759Domain d4liwa1: 4liw A:3-91 [235888]
        Other proteins in same PDB: d4liwa2, d4liwb2
        automated match to d3cimc_
        complexed with so4; mutant
      2. 2562760Domain d4liwb1: 4liw B:3-91 [235889]
        Other proteins in same PDB: d4liwa2, d4liwb2
        automated match to d3cimc_
        complexed with so4; mutant
    2. Domains for 6scr:
      1. 2562761Domain d6scra_: 6scr A: [376133]
        automated match to d2a10c_
        complexed with edo
      2. 2562762Domain d6scrb_: 6scr B: [376134]
        automated match to d2a10c_
        complexed with edo
  5. 2562763Synechocystis sp. [TaxId:1143] [225417] (1 PDB entry)
  6. 2562770Synechocystis sp. [TaxId:1148] [226775] (2 PDB entries)
    1. Domains for 3dn9:
      1. 2562772Domain d3dn9a_: 3dn9 A: [209237]
        Other proteins in same PDB: d3dn9b2, d3dn9d2, d3dn9f2
        automated match to d3ssra_
        complexed with so4; mutant
      2. 2562773Domain d3dn9b1: 3dn9 B:3-91 [209238]
        Other proteins in same PDB: d3dn9b2, d3dn9d2, d3dn9f2
        automated match to d3ssra_
        complexed with so4; mutant
      3. 2562774Domain d3dn9c_: 3dn9 C: [209239]
        Other proteins in same PDB: d3dn9b2, d3dn9d2, d3dn9f2
        automated match to d3ssra_
        complexed with so4; mutant
      4. 2562775Domain d3dn9d1: 3dn9 D:3-91 [209240]
        Other proteins in same PDB: d3dn9b2, d3dn9d2, d3dn9f2
        automated match to d3ssra_
        complexed with so4; mutant
      5. 2562776Domain d3dn9e_: 3dn9 E: [209241]
        Other proteins in same PDB: d3dn9b2, d3dn9d2, d3dn9f2
        automated match to d3ssra_
        complexed with so4; mutant
      6. 2562777Domain d3dn9f1: 3dn9 F:3-91 [209242]
        Other proteins in same PDB: d3dn9b2, d3dn9d2, d3dn9f2
        automated match to d3ssra_
        complexed with so4; mutant
    2. Domain for 3dnc:
  7. 2562778Thermosynechococcus elongatus [TaxId:197221] [194973] (3 PDB entries)
    1. Domains for 3ssq:
      1. 2562787Domain d3ssqa_: 3ssq A: [216541]
        automated match to d2a1ba1
        complexed with cl, gol
      2. 2562788Domain d3ssqb_: 3ssq B: [216542]
        automated match to d2a1ba1
        complexed with cl, gol
      3. 2562789Domain d3ssqc_: 3ssq C: [216543]
        automated match to d2a1ba1
        complexed with cl, gol
      4. 2562790Domain d3ssqd_: 3ssq D: [216544]
        automated match to d2a1ba1
        complexed with cl, gol
      5. 2562791Domain d3ssqe_: 3ssq E: [216545]
        automated match to d2a1ba1
        complexed with cl, gol
      6. 2562792Domain d3ssqf_: 3ssq F: [216546]
        automated match to d2a1ba1
        complexed with cl, gol
    2. Domains for 3ssr:
      1. 2562779Domain d3ssra_: 3ssr A: [194975]
        automated match to d2a1ba1
        complexed with so4
      2. 2562780Domain d3ssrb_: 3ssr B: [194974]
        automated match to d2a1ba1
        complexed with so4
    3. Domains for 3sss:
      1. 2562781Domain d3sssa1: 3sss A:2-102 [194978]
        Other proteins in same PDB: d3sssa2, d3sssb2, d3sssc2, d3sssd2, d3ssse2, d3sssf2
        automated match to d2a1ba1
        complexed with cl
      2. 2562782Domain d3sssb1: 3sss B:3-102 [194977]
        Other proteins in same PDB: d3sssa2, d3sssb2, d3sssc2, d3sssd2, d3ssse2, d3sssf2
        automated match to d2a1ba1
        complexed with cl
      3. 2562783Domain d3sssc1: 3sss C:2-102 [194976]
        Other proteins in same PDB: d3sssa2, d3sssb2, d3sssc2, d3sssd2, d3ssse2, d3sssf2
        automated match to d2a1ba1
        complexed with cl
      4. 2562784Domain d3sssd1: 3sss D:2-102 [194981]
        Other proteins in same PDB: d3sssa2, d3sssb2, d3sssc2, d3sssd2, d3ssse2, d3sssf2
        automated match to d2a1ba1
        complexed with cl
      5. 2562785Domain d3ssse1: 3sss E:3-102 [194979]
        Other proteins in same PDB: d3sssa2, d3sssb2, d3sssc2, d3sssd2, d3ssse2, d3sssf2
        automated match to d2a1ba1
        complexed with cl
      6. 2562786Domain d3sssf1: 3sss F:2-102 [194980]
        Other proteins in same PDB: d3sssa2, d3sssb2, d3sssc2, d3sssd2, d3ssse2, d3sssf2
        automated match to d2a1ba1
        complexed with cl

More info for Protein automated matches from d.58.56.1: CcmK-like

Timeline for Protein automated matches from d.58.56.1: CcmK-like: