Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2434695Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2438500Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2440705Family c.1.8.7: NagZ-like [51553] (4 proteins)
    Pfam PF00933; Glycosyl hydrolase family 3 domain
    Some members have reversed beta strand compared to other members of fold
  6. 2440743Protein automated matches [191056] (3 species)
    not a true protein

Species:

  1. 2440744Hordeum vulgare [TaxId:112509] [270740] (33 PDB entries)
    1. Domain for 3wli:
    2. Domain for 3wlo:
    3. Domain for 3wlq:
    4. Domain for 3wlr:
    5. Domain for 3wls:
    6. Domain for 3wlt:
    7. Domain for 6jg1:
    8. Domain for 6jg2:
    9. Domain for 6jg6:
    10. Domain for 6jg7:
    11. Domain for 6jga:
    12. Domain for 6jgb:
    13. Domain for 6jgc:
    14. Domain for 6jgd:
    15. Domain for 6jge:
    16. Domain for 6jgg:
    17. Domain for 6jgk:
    18. Domain for 6jgl:
    19. Domain for 6jgn:
    20. Domain for 6jgo:
    21. Domain for 6jgp:
    22. Domain for 6jgq:
    23. Domain for 6jgr:
    24. Domain for 6jgs:
    25. Domain for 6jgt:
    26. Domain for 6k6v:
    27. Domain for 6kuf:
    28. Domain for 6l1j:
    29. Domain for 6lbb:
    30. Domain for 6lbv:
    31. Domain for 6lc5:
    32. Domain for 6md6:
    33. Domain for 6mi1:
  2. 2440778Thermotoga neapolitana [TaxId:309803] [255674] (4 PDB entries)
    1. Domain for 2wt3:
    2. Domain for 2wt6:
    3. Domain for 2x40:
    4. Domain for 2x41:
  3. 2440783Vibrio cholerae [TaxId:666] [188936] (2 PDB entries)
    1. Domain for 3gs6:
    2. Domain for 3gsm:

More info for Protein automated matches from c.1.8.7: NagZ-like

Timeline for Protein automated matches from c.1.8.7: NagZ-like: