![]() | Class d: Alpha and beta proteins (a+b) [53931] (396 folds) |
![]() | Fold d.167: Peptide deformylase [56419] (1 superfamily) alpha-beta(5)-alpha; 3 layers: a/b/a; meander beta-sheet wraps around the C-terminal alpha-helix |
![]() | Superfamily d.167.1: Peptide deformylase [56420] (2 families) ![]() nickel-dependent enzyme |
![]() | Family d.167.1.0: automated matches [191587] (1 protein) not a true family |
![]() | Protein automated matches [191055] (20 species) not a true protein |
![]() | Acinetobacter baumannii [TaxId:470] [380329] (6 PDB entries) |
![]() | Domain d6jesa_: 6jes A: [380349] automated match to d2defa_ complexed with gol, zn |
![]() | Domain d6jesb_: 6jes B: [380337] automated match to d2defa_ complexed with gol, zn |
![]() | Domain d6jf3a_: 6jf3 A: [380343] automated match to d2defa_ complexed with bb2, zn |
![]() | Domain d6jf3b_: 6jf3 B: [380359] automated match to d2defa_ complexed with bb2, zn |
![]() | Domain d6jf4a_: 6jf4 A: [380345] automated match to d2defa_ complexed with k1u, zn |
![]() | Domain d6jf4b_: 6jf4 B: [380397] automated match to d2defa_ complexed with k1u, zn |
![]() | Domain d6jf5a_: 6jf5 A: [380330] automated match to d2defa_ complexed with k2u, zn |
![]() | Domain d6jf5b_: 6jf5 B: [380335] automated match to d2defa_ complexed with k2u, zn |
![]() | Domain d6jf7a_: 6jf7 A: [380374] automated match to d2defa_ complexed with k3u, zn |
![]() | Domain d6jf7b_: 6jf7 B: [380393] automated match to d2defa_ complexed with k3u, zn |
![]() | Domain d6jf8a_: 6jf8 A: [380402] automated match to d2defa_ complexed with lhy, zn |
![]() | Domain d6jf8b_: 6jf8 B: [380368] automated match to d2defa_ complexed with lhy, zn |
![]() | Domain d6jf8c_: 6jf8 C: [380388] automated match to d2defa_ complexed with lhy, zn |
![]() | Domain d6jf8d_: 6jf8 D: [380386] automated match to d2defa_ complexed with lhy, zn |
![]() | Bacillus cereus [TaxId:1396] [225021] (2 PDB entries) |
![]() | Domain d1ws0a_: 1ws0 A: [203017] automated match to d2defa_ complexed with ni |
![]() | Domain d1ws1a_: 1ws1 A: [203018] automated match to d2defa_ complexed with bb2, ni |
![]() | Burkholderia ambifaria [TaxId:396596] [314970] (1 PDB entry) |
![]() | Domain d5i2ba1: 5i2b A:1-169 [314971] Other proteins in same PDB: d5i2ba2 automated match to d4nt8a_ complexed with bb2, edo, zn |
![]() | Burkholderia ambifaria [TaxId:398577] [314942] (1 PDB entry) |
![]() | Domain d5hgwa1: 5hgw A:1-171 [315074] Other proteins in same PDB: d5hgwa2, d5hgwb2 automated match to d4nt8a_ complexed with edo, fe, so4 |
![]() | Domain d5hgwb1: 5hgw B:1-171 [314943] Other proteins in same PDB: d5hgwa2, d5hgwb2 automated match to d4nt8a_ complexed with edo, fe, so4 |
![]() | Burkholderia multivorans [TaxId:395019] [315513] (2 PDB entries) |
![]() | Domain d5j46a1: 5j46 A:15-181 [316827] Other proteins in same PDB: d5j46a2 automated match to d4wxkc_ complexed with edo, zn |
![]() | Domain d5t8za1: 5t8z A:1-169 [324099] Other proteins in same PDB: d5t8za2 automated match to d3dlda_ complexed with bb2, fe2 |
![]() | Burkholderia xenovorans [TaxId:266265] [319599] (1 PDB entry) |
![]() | Domain d5koba1: 5kob A:1-169 [319651] Other proteins in same PDB: d5koba2 automated match to d3dlda_ complexed with edo, fe2, fmt |
![]() | Domain d5kobb_: 5kob B: [319600] Other proteins in same PDB: d5koba2 automated match to d3dlda_ complexed with edo, fe2, fmt |
![]() | Domain d5kobc_: 5kob C: [319615] Other proteins in same PDB: d5koba2 automated match to d3dlda_ complexed with edo, fe2, fmt |
![]() | Domain d5kobd_: 5kob D: [319640] Other proteins in same PDB: d5koba2 automated match to d3dlda_ complexed with edo, fe2, fmt |
![]() | Ehrlichia chaffeensis [TaxId:205920] [189753] (2 PDB entries) |
![]() | Domain d3ocaa_: 3oca A: [214301] automated match to d3u04a_ complexed with cl, zn |
![]() | Domain d3ocab_: 3oca B: [214302] automated match to d3u04a_ complexed with cl, zn |
![]() | Domain d3u04a_: 3u04 A: [186046] automated match to d1n5na_ complexed with bb2, cl, zn |
![]() | Escherichia coli K-12 [TaxId:83333] [226789] (2 PDB entries) |
![]() | Domain d2w3ta_: 2w3t A: [206603] automated match to d3qu1a_ complexed with cl, eoh, ni |
![]() | Domain d2w3ua_: 2w3u A: [206604] automated match to d3qu1a_ complexed with fmt, ni |
![]() | Helicobacter pylori [TaxId:210] [255153] (5 PDB entries) |
![]() | Domain d2ew5a_: 2ew5 A: [241794] automated match to d1ws0a_ complexed with co, y12 |
![]() | Domain d2ew6a_: 2ew6 A: [241795] automated match to d1ws0a_ complexed with co, y13 |
![]() | Domain d2ew7a_: 2ew7 A: [241796] automated match to d1ws0a_ complexed with co |
![]() | Domain d4e9aa_: 4e9a A: [251701] automated match to d1ws0a_ complexed with co, dms, epe, qap |
![]() | Domain d4e9ba_: 4e9b A: [251702] automated match to d1ws0a_ complexed with bb2, co, dms, epe |
![]() | Human (Homo sapiens) [TaxId:9606] [225635] (2 PDB entries) |
![]() | Domain d3g5ka1: 3g5k A:6-185 [210397] Other proteins in same PDB: d3g5ka2, d3g5kb2, d3g5kc2, d3g5kd2 automated match to d1vezb_ complexed with bb2, co |
![]() | Domain d3g5kb1: 3g5k B:6-185 [210398] Other proteins in same PDB: d3g5ka2, d3g5kb2, d3g5kc2, d3g5kd2 automated match to d1vezb_ complexed with bb2, co |
![]() | Domain d3g5kc1: 3g5k C:6-185 [210399] Other proteins in same PDB: d3g5ka2, d3g5kb2, d3g5kc2, d3g5kd2 automated match to d1vezb_ complexed with bb2, co |
![]() | Domain d3g5kd1: 3g5k D:6-185 [210400] Other proteins in same PDB: d3g5ka2, d3g5kb2, d3g5kc2, d3g5kd2 automated match to d1vezb_ complexed with bb2, co |
![]() | Domain d3g5pa1: 3g5p A:6-185 [210405] Other proteins in same PDB: d3g5pa2, d3g5pb2, d3g5pc2, d3g5pd2 automated match to d1vezb_ complexed with co, po4 |
![]() | Domain d3g5pb1: 3g5p B:6-185 [210406] Other proteins in same PDB: d3g5pa2, d3g5pb2, d3g5pc2, d3g5pd2 automated match to d1vezb_ complexed with co, po4 |
![]() | Domain d3g5pc1: 3g5p C:6-185 [210407] Other proteins in same PDB: d3g5pa2, d3g5pb2, d3g5pc2, d3g5pd2 automated match to d1vezb_ complexed with co, po4 |
![]() | Domain d3g5pd1: 3g5p D:6-185 [210408] Other proteins in same PDB: d3g5pa2, d3g5pb2, d3g5pc2, d3g5pd2 automated match to d1vezb_ complexed with co, po4 |
![]() | Legionella pneumophila [TaxId:272624] [350026] (1 PDB entry) |
![]() | Domain d6caza_: 6caz A: [350027] automated match to d3qu1a_ complexed with cl, mes, ni |
![]() | Legionella pneumophila [TaxId:446] [350187] (1 PDB entry) |
![]() | Domain d6ck7a1: 6ck7 A:1-170 [350188] Other proteins in same PDB: d6ck7a2, d6ck7b2, d6ck7c2, d6ck7d2 automated match to d3qu1a_ complexed with bb2, so4, zn |
![]() | Domain d6ck7b1: 6ck7 B:1-170 [350313] Other proteins in same PDB: d6ck7a2, d6ck7b2, d6ck7c2, d6ck7d2 automated match to d3qu1a_ complexed with bb2, so4, zn |
![]() | Domain d6ck7c1: 6ck7 C:1-170 [350322] Other proteins in same PDB: d6ck7a2, d6ck7b2, d6ck7c2, d6ck7d2 automated match to d3qu1a_ complexed with bb2, so4, zn |
![]() | Domain d6ck7d1: 6ck7 D:1-170 [350292] Other proteins in same PDB: d6ck7a2, d6ck7b2, d6ck7c2, d6ck7d2 automated match to d3qu1a_ complexed with bb2, so4, zn |
![]() | Mycobacterium tuberculosis [TaxId:1773] [255809] (1 PDB entry) |
![]() | Domain d3e3ua_: 3e3u A: [245797] automated match to d1zxzb_ complexed with ni, nvc |
![]() | Paraburkholderia xenovorans [TaxId:266265] [333971] (1 PDB entry) |
![]() | Domain d5vcpa_: 5vcp A: [333995] automated match to d3dlda_ complexed with bb2, fe2, mg |
![]() | Domain d5vcpb_: 5vcp B: [334021] automated match to d3dlda_ complexed with bb2, fe2, mg |
![]() | Domain d5vcpc_: 5vcp C: [334034] automated match to d3dlda_ complexed with bb2, fe2, mg |
![]() | Domain d5vcpd_: 5vcp D: [333972] automated match to d3dlda_ complexed with bb2, fe2, mg |
![]() | Pseudomonas aeruginosa [TaxId:287] [380338] (6 PDB entries) |
![]() | Domain d6jf9a_: 6jf9 A: [380339] automated match to d5kobc_ complexed with gol, ni |
![]() | Domain d6jf9b_: 6jf9 B: [380348] automated match to d5kobc_ complexed with gol, ni |
![]() | Domain d6jfca_: 6jfc A: [380347] automated match to d5kobc_ complexed with bb2, ni |
![]() | Domain d6jfcb_: 6jfc B: [380350] automated match to d5kobc_ complexed with bb2, ni |
![]() | Domain d6jfda_: 6jfd A: [380341] automated match to d5kobc_ complexed with k1u, ni |
![]() | Domain d6jfdb_: 6jfd B: [380356] automated match to d5kobc_ complexed with k1u, ni |
![]() | Domain d6jfdc_: 6jfd C: [380342] automated match to d5kobc_ complexed with k1u, ni |
![]() | Domain d6jfdd_: 6jfd D: [380414] automated match to d5kobc_ complexed with k1u, ni |
![]() | Domain d6jfea_: 6jfe A: [380361] automated match to d5kobc_ complexed with k3u, ni |
![]() | Domain d6jfeb_: 6jfe B: [380382] automated match to d5kobc_ complexed with k3u, ni |
![]() | Domain d6jffa_: 6jff A: [380398] automated match to d5kobc_ complexed with k3u, ni |
![]() | Domain d6jffb_: 6jff B: [380371] automated match to d5kobc_ complexed with k3u, ni |
![]() | Domain d6jfna_: 6jfn A: [381678] automated match to d5kobc_ complexed with lhy, ni |
![]() | Domain d6jfnb_: 6jfn B: [381645] automated match to d5kobc_ complexed with lhy, ni |
![]() | Synechococcus elongatus [TaxId:269084] [226557] (2 PDB entries) |
![]() | Domain d4dr8a_: 4dr8 A: [234331] automated match to d4dr8b_ complexed with cl, edo, fmt, zn |
![]() | Domain d4dr8b_: 4dr8 B: [219962] automated match to d1veza_ complexed with cl, edo, fmt, zn |
![]() | Domain d4dr8c_: 4dr8 C: [219963] automated match to d1veza_ complexed with cl, edo, fmt, zn |
![]() | Domain d4dr8d_: 4dr8 D: [219964] automated match to d1veza_ complexed with cl, edo, fmt, zn |
![]() | Domain d4dr9a_: 4dr9 A: [234332] automated match to d4dr8b_ complexed with bb2, br, zn |
![]() | Domain d4dr9b_: 4dr9 B: [219965] automated match to d1veza_ complexed with bb2, br, zn |
![]() | Domain d4dr9c_: 4dr9 C: [219966] automated match to d1veza_ complexed with bb2, br, zn |
![]() | Domain d4dr9d_: 4dr9 D: [219967] automated match to d1veza_ complexed with bb2, br, zn |
![]() | Synechococcus phage [TaxId:445686] [194160] (2 PDB entries) |
![]() | Domain d3uwaa1: 3uwa A:26-148 [194162] Other proteins in same PDB: d3uwaa2 automated match to d1lmeb_ complexed with mrd, zn |
![]() | Domain d3uwba1: 3uwb A:26-149 [194161] Other proteins in same PDB: d3uwba2 automated match to d1lmeb_ complexed with bb2, cl, edo, zn |
![]() | Thale cress (Arabidopsis thaliana) [TaxId:3702] [230479] (5 PDB entries) |
![]() | Domain d1zxza1: 1zxz A:2-190 [230481] Other proteins in same PDB: d1zxza2, d1zxzb2 automated match to d3g5ka_ complexed with zn |
![]() | Domain d1zxzb1: 1zxz B:2-190 [230480] Other proteins in same PDB: d1zxza2, d1zxzb2 automated match to d3g5ka_ complexed with zn |
![]() | Domain d1zy0a1: 1zy0 A:2-190 [230482] Other proteins in same PDB: d1zy0a2, d1zy0b2 automated match to d3g5ka_ complexed with zn |
![]() | Domain d1zy0b1: 1zy0 B:2-190 [230483] Other proteins in same PDB: d1zy0a2, d1zy0b2 automated match to d3g5ka_ complexed with zn |
![]() | Domain d1zy1a1: 1zy1 A:2-190 [241178] Other proteins in same PDB: d1zy1a2, d1zy1b2 automated match to d4je6a_ complexed with zn |
![]() | Domain d1zy1b1: 1zy1 B:2-190 [241179] Other proteins in same PDB: d1zy1a2, d1zy1b2 automated match to d4je6a_ complexed with zn |
![]() | Domain d4je6a1: 4je6 A:2-190 [237949] Other proteins in same PDB: d4je6a2, d4je6b2 automated match to d4je7a_ complexed with zn |
![]() | Domain d4je6b1: 4je6 B:3-190 [237948] Other proteins in same PDB: d4je6a2, d4je6b2 automated match to d4je7a_ complexed with zn |
![]() | Domain d4je7a1: 4je7 A:2-190 [237167] Other proteins in same PDB: d4je7a2, d4je7b2 automated match to d3g5ka_ complexed with bb2, zn |
![]() | Domain d4je7b1: 4je7 B:3-190 [237168] Other proteins in same PDB: d4je7a2, d4je7b2 automated match to d3g5ka_ complexed with bb2, zn |
![]() | Vibrio cholerae [TaxId:666] [189665] (1 PDB entry) |
![]() | Domain d3qu1a_: 3qu1 A: [184624] automated match to d1bs4a_ complexed with cl, so4, zn |
![]() | Domain d3qu1b_: 3qu1 B: [184625] automated match to d1bs4a_ complexed with cl, so4, zn |
![]() | Xanthomonas oryzae [TaxId:64187] [188927] (16 PDB entries) |
![]() | Domain d4nt8a_: 4nt8 A: [261360] automated match to d3dlda_ complexed with act, ala, cd, fme, gol, na |
![]() | Domain d5cpda_: 5cpd A: [320295] automated match to d3dlda_ complexed with act, ala, cd, gol, met, na |
![]() | Domain d5cvka_: 5cvk A: [320270] automated match to d3dlda_ complexed with 56e, act, cd, na |
![]() | Domain d5cvpa_: 5cvp A: [320262] automated match to d3dlda_ complexed with 56f, act, cd, na |
![]() | Domain d5cvqa_: 5cvq A: [320296] automated match to d3dlda_ complexed with act, bb2, cd |
![]() | Domain d5cwxa_: 5cwx A: [320348] automated match to d3dlda_ complexed with 56k, act, cd |
![]() | Domain d5cwya_: 5cwy A: [320272] automated match to d3dlda_ complexed with 4wl, act, cd, na |
![]() | Domain d5cx0a_: 5cx0 A: [320277] automated match to d3dlda_ complexed with 56l, act, cd |
![]() | Domain d5cxja_: 5cxj A: [320353] automated match to d3dlda_ complexed with 56t, act, cd, na |
![]() | Domain d5cy7a_: 5cy7 A: [320370] automated match to d3dlda_ complexed with 56u, act, cd, na |
![]() | Domain d5cy8a_: 5cy8 A: [320314] automated match to d3dlda_ complexed with 56v, act, cd, na |
![]() | Domain d5e5da_: 5e5d A: [323900] automated match to d3dlda_ complexed with cd |
![]() | Domain d6ikta_: 6ikt A: [375984] automated match to d5cwxa_ complexed with cd, k1u, ni |
![]() | Domain d6ikya_: 6iky A: [376091] automated match to d4nt8a_ complexed with k2u, ni |
![]() | Domain d6il0a_: 6il0 A: [375993] automated match to d5cwxa_ complexed with k3u, ni |
![]() | Domain d6il2a_: 6il2 A: [375978] automated match to d4nt8a_ complexed with cd, lhy |
Timeline for Protein automated matches from d.167.1.0: automated matches: