Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2160864Fold c.92: Chelatase-like [53799] (3 superfamilies)
    duplication: tandem repeat of two domains; 3 layers (a/b/a); parallel beta-sheet of 4 strands, order 2134
  4. 2160971Superfamily c.92.2: "Helical backbone" metal receptor [53807] (5 families) (S)
    contains a long alpha helical insertion in the interdomain linker
  5. 2160979Family c.92.2.2: TroA-like [53811] (6 proteins)
  6. 2161006Protein automated matches [191053] (5 species)
    not a true protein

Species:

  1. 2161007Escherichia coli [TaxId:562] [330411] (2 PDB entries)
    1. Domains for 5m2q:
      1. 2161008Domain d5m2qa_: 5m2q A: [330412]
        Other proteins in same PDB: d5m2qb2
        automated match to d1n2za_
        complexed with cby, cyn, gol; mutant
      2. 2161009Domain d5m2qb1: 5m2q B:22-265 [330413]
        Other proteins in same PDB: d5m2qb2
        automated match to d1n2za_
        complexed with cby, cyn, gol; mutant
    2. Domains for 5ovw:
      1. 2161010Domain d5ovwa_: 5ovw A: [341310]
        Other proteins in same PDB: d5ovwg_, d5ovwh_, d5ovwi_, d5ovwj_, d5ovwk_, d5ovwl_
        automated match to d1n2za_
        complexed with gol
      2. 2161011Domain d5ovwb_: 5ovw B: [341309]
        Other proteins in same PDB: d5ovwg_, d5ovwh_, d5ovwi_, d5ovwj_, d5ovwk_, d5ovwl_
        automated match to d1n2za_
        complexed with gol
      3. 2161012Domain d5ovwc_: 5ovw C: [341378]
        Other proteins in same PDB: d5ovwg_, d5ovwh_, d5ovwi_, d5ovwj_, d5ovwk_, d5ovwl_
        automated match to d1n2za_
        complexed with gol
      4. 2161013Domain d5ovwd_: 5ovw D: [341371]
        Other proteins in same PDB: d5ovwg_, d5ovwh_, d5ovwi_, d5ovwj_, d5ovwk_, d5ovwl_
        automated match to d1n2za_
        complexed with gol
      5. 2161014Domain d5ovwe_: 5ovw E: [341334]
        Other proteins in same PDB: d5ovwg_, d5ovwh_, d5ovwi_, d5ovwj_, d5ovwk_, d5ovwl_
        automated match to d1n2za_
        complexed with gol
      6. 2161015Domain d5ovwf_: 5ovw F: [341329]
        Other proteins in same PDB: d5ovwg_, d5ovwh_, d5ovwi_, d5ovwj_, d5ovwk_, d5ovwl_
        automated match to d1n2za_
        complexed with gol
  2. 2161016Escherichia coli [TaxId:83333] [329504] (3 PDB entries)
    1. Domains for 5m29:
      1. 2161017Domain d5m29a_: 5m29 A: [329570]
        automated match to d1n2za_
        complexed with cby, cyn, gol
      2. 2161018Domain d5m29b_: 5m29 B: [329505]
        automated match to d1n2za_
        complexed with cby, cyn, gol
    2. Domains for 5m34:
      1. 2161021Domain d5m34a_: 5m34 A: [330430]
        Other proteins in same PDB: d5m34b2
        automated match to d1n2za_
        complexed with cby, cyn, gol; mutant
      2. 2161022Domain d5m34b1: 5m34 B:22-265 [330512]
        Other proteins in same PDB: d5m34b2
        automated match to d1n2za_
        complexed with cby, cyn, gol; mutant
    3. Domains for 5m3b:
      1. 2161019Domain d5m3ba_: 5m3b A: [330426]
        Other proteins in same PDB: d5m3bb2
        automated match to d1n2za_
        complexed with cby, cyn, gol; mutant
      2. 2161020Domain d5m3bb1: 5m3b B:22-266 [330389]
        Other proteins in same PDB: d5m3bb2
        automated match to d1n2za_
        complexed with cby, cyn, gol; mutant
  3. 2161023Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [189842] (7 PDB entries)
    1. Domains for 3zk7:
      1. 2161030Domain d3zk7a_: 3zk7 A: [228905]
        automated match to d3ztta_
        complexed with trs
      2. 2161031Domain d3zk7b_: 3zk7 B: [235910]
        automated match to d3zk7a_
        complexed with trs
    2. Domains for 3zk8:
      1. 2161028Domain d3zk8a_: 3zk8 A: [228904]
        automated match to d3ztta_
        complexed with trs
      2. 2161029Domain d3zk8b_: 3zk8 B: [235909]
        automated match to d3zk8a_
        complexed with trs
    3. Domains for 3zk9:
      1. 2161024Domain d3zk9a_: 3zk9 A: [228906]
        automated match to d3ztta_
        complexed with trs
      2. 2161025Domain d3zk9b_: 3zk9 B: [228907]
        automated match to d3ztta_
        complexed with trs
    4. Domains for 3zka:
      1. 2161026Domain d3zkaa_: 3zka A: [235912]
        automated match to d3zk9a_
        complexed with mn, trs
      2. 2161027Domain d3zkab_: 3zka B: [235911]
        automated match to d3zk9a_
        complexed with mn, trs
    5. Domains for 3ztt:
      1. 2161036Domain d3ztta_: 3ztt A: [186566]
        automated match to d1psza_
        complexed with mn
      2. 2161037Domain d3zttb_: 3ztt B: [186567]
        automated match to d1psza_
        complexed with mn
      3. 2161038Domain d3zttc_: 3ztt C: [186568]
        automated match to d1psza_
        complexed with mn
      4. 2161039Domain d3zttd_: 3ztt D: [186569]
        automated match to d1psza_
        complexed with mn
    6. Domains for 4uto:
      1. 2161032Domain d4utoa_: 4uto A: [269937]
        automated match to d1psza_
        complexed with cd, trs
      2. 2161033Domain d4utob_: 4uto B: [269936]
        automated match to d1psza_
        complexed with cd, trs
    7. Domains for 4utp:
      1. 2161034Domain d4utpa1: 4utp A:32-309 [264005]
        Other proteins in same PDB: d4utpa2, d4utpb2
        automated match to d1psza_
        complexed with cd
      2. 2161035Domain d4utpb1: 4utp B:32-309 [259043]
        Other proteins in same PDB: d4utpa2, d4utpb2
        automated match to d1psza_
        complexed with cd
  4. 2161040Streptococcus pyogenes [TaxId:301447] [188912] (1 PDB entry)
  5. 2161042Synechocystis sp. [TaxId:1143] [225291] (2 PDB entries)
    1. Domain for 2ov1:
    2. Domain for 2ov3:

More info for Protein automated matches from c.92.2.2: TroA-like

Timeline for Protein automated matches from c.92.2.2: TroA-like: