Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2150370Fold c.117: Amidase signature (AS) enzymes [75303] (1 superfamily)
    possible duplication: the topologies of N- and C-terminal halves are similar; 3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213549A867 (A=10); strands from 5 to 9 are antiparallel to the rest
  4. 2150371Superfamily c.117.1: Amidase signature (AS) enzymes [75304] (1 family) (S)
    automatically mapped to Pfam PF01425
  5. 2150372Family c.117.1.1: Amidase signature (AS) enzymes [75305] (5 protein domains)
  6. 2150439Protein automated matches [191046] (2 species)
    not a true protein

Species:

  1. 2150440Norway rat (Rattus norvegicus) [TaxId:10116] [188885] (19 PDB entries)
    1. Domains for 2vya:
      1. 2150469Domain d2vyaa_: 2vya A: [243955]
        automated match to d3oj8b_
        complexed with cl, pf7, unx
      2. 2150470Domain d2vyab_: 2vya B: [243956]
        automated match to d3oj8b_
        complexed with cl, pf7, unx
    2. Domains for 2wap:
      1. 2150471Domain d2wapa_: 2wap A: [169162]
        automated match to d1mt5a_
        complexed with cl, na, pix
      2. 2150472Domain d2wapb_: 2wap B: [169163]
        automated match to d1mt5a_
        complexed with cl, na, pix
    3. Domains for 2wj1:
      1. 2150447Domain d2wj1a_: 2wj1 A: [206842]
        automated match to d2wapb_
        complexed with cl, s99
      2. 2150448Domain d2wj1b_: 2wj1 B: [206843]
        automated match to d2wapb_
        complexed with cl, s99
    4. Domains for 2wj2:
      1. 2150465Domain d2wj2a_: 2wj2 A: [206844]
        automated match to d2wapb_
        complexed with cl, ol1
      2. 2150466Domain d2wj2b_: 2wj2 B: [206845]
        automated match to d2wapb_
        complexed with cl, ol1
    5. Domains for 3k7f:
      1. 2150443Domain d3k7fa_: 3k7f A: [212194]
        automated match to d2wapb_
        complexed with cl, f2c, na
      2. 2150444Domain d3k7fb_: 3k7f B: [212195]
        automated match to d2wapb_
        complexed with cl, f2c, na
    6. Domains for 3k83:
      1. 2150451Domain d3k83a_: 3k83 A: [212197]
        automated match to d2wapb_
        complexed with 1do, cl, f27
      2. 2150452Domain d3k83b_: 3k83 B: [212198]
        automated match to d2wapb_
        complexed with 1do, cl, f27
    7. Domains for 3k84:
      1. 2150455Domain d3k84a_: 3k84 A: [212199]
        automated match to d2wapb_
        complexed with cl, k84
      2. 2150456Domain d3k84b_: 3k84 B: [212200]
        automated match to d2wapb_
        complexed with cl, k84
    8. Domains for 3lj6:
      1. 2150467Domain d3lj6a_: 3lj6 A: [212909]
        automated match to d2wapb_
        complexed with cl, pix
      2. 2150468Domain d3lj6b_: 3lj6 B: [212910]
        automated match to d2wapb_
        complexed with cl, pix
    9. Domains for 3lj7:
      1. 2150457Domain d3lj7a_: 3lj7 A: [212911]
        automated match to d2wapb_
        complexed with cl, oho
      2. 2150458Domain d3lj7b_: 3lj7 B: [212912]
        automated match to d2wapb_
        complexed with cl, oho
    10. Domains for 3oj8:
      1. 2150445Domain d3oj8a_: 3oj8 A: [214350]
        automated match to d2wapb_
        complexed with cl, oj8
      2. 2150446Domain d3oj8b_: 3oj8 B: [214351]
        automated match to d2wapb_
        complexed with cl, oj8
    11. Domains for 3ppm:
      1. 2150441Domain d3ppma_: 3ppm A: [214897]
        automated match to d2wapb_
        complexed with 1do, cl, f, jg1, peg
      2. 2150442Domain d3ppmb_: 3ppm B: [214898]
        automated match to d2wapb_
        complexed with 1do, cl, f, jg1, peg
    12. Domains for 3pr0:
      1. 2150449Domain d3pr0a_: 3pr0 A: [214933]
        automated match to d2wapb_
        complexed with cl, jg2, peg
      2. 2150450Domain d3pr0b_: 3pr0 B: [214934]
        automated match to d2wapb_
        complexed with cl, jg2, peg
    13. Domains for 3qj8:
      1. 2150473Domain d3qj8a1: 3qj8 A:32-577 [248908]
        Other proteins in same PDB: d3qj8a2
        automated match to d3oj8b_
      2. 2150474Domain d3qj8b_: 3qj8 B: [248909]
        Other proteins in same PDB: d3qj8a2
        automated match to d3oj8b_
    14. Domains for 3qj9:
      1. 2150461Domain d3qj9a1: 3qj9 A:32-577 [248910]
        Other proteins in same PDB: d3qj9a2
        automated match to d3oj8b_
        complexed with edo, gol, pge, qj9
      2. 2150462Domain d3qj9b_: 3qj9 B: [248911]
        Other proteins in same PDB: d3qj9a2
        automated match to d3oj8b_
        complexed with edo, gol, pge, qj9
    15. Domains for 3qk5:
      1. 2150459Domain d3qk5a1: 3qk5 A:32-577 [248922]
        Other proteins in same PDB: d3qk5a2
        automated match to d3oj8b_
        complexed with edo, gol, qk5
      2. 2150460Domain d3qk5b_: 3qk5 B: [248923]
        Other proteins in same PDB: d3qk5a2
        automated match to d3oj8b_
        complexed with edo, gol, qk5
    16. Domains for 3qkv:
      1. 2150477Domain d3qkva1: 3qkv A:32-577 [248926]
        Other proteins in same PDB: d3qkva2
        automated match to d3oj8b_
        complexed with qkv
      2. 2150478Domain d3qkvb_: 3qkv B: [248927]
        Other proteins in same PDB: d3qkva2
        automated match to d3oj8b_
        complexed with qkv
    17. Domains for 4do3:
      1. 2150453Domain d4do3a_: 4do3 A: [219882]
        automated match to d2wapb_
        complexed with 0la, cl, oho
      2. 2150454Domain d4do3b_: 4do3 B: [219883]
        automated match to d2wapb_
        complexed with 0la, cl, oho
    18. Domains for 4hbp:
      1. 2150475Domain d4hbpa_: 4hbp A: [202412]
        automated match to d4hbpb_
        complexed with 17j
      2. 2150476Domain d4hbpb_: 4hbp B: [194027]
        automated match to d2wapb_
        complexed with 17j
    19. Domains for 4j5p:
      1. 2150463Domain d4j5pa_: 4j5p A: [223557]
        automated match to d2wapb_
        complexed with br1, cl, peg
      2. 2150464Domain d4j5pb_: 4j5p B: [223558]
        automated match to d2wapb_
        complexed with br1, cl, peg
  2. 2276372Stenotrophomonas maltophilia [TaxId:40324] [319673] (1 PDB entry)

More info for Protein automated matches from c.117.1.1: Amidase signature (AS) enzymes

Timeline for Protein automated matches from c.117.1.1: Amidase signature (AS) enzymes: