Species:

1. Bacteroides fragilis [TaxId:272559] [188861] (2 PDB entries)

   1. Domains for 3gzs:

      1. Domain d3gzsa_: 3gzs A: [177116] automated match to d3cgha1 complexed with act, gol

      2. Domain d3gzsb_: 3gzs B: [177117] automated match to d3cgha1 complexed with act, gol

   2. Domains for 3mx3:

      1. Domain d3mx3a_: 3mx3 A: [247839] automated match to d4lera_ complexed with cl, epe, mg

      2. Domain d3mx3b_: 3mx3 B: [247840] automated match to d4lera_ complexed with cl, epe, mg

2. Bacteroides ovatus [TaxId:411476] [194986] (1 PDB entry)

   • Domains for 4f53:

     1. Domain d4f53a_: 4f53 A: [201997] automated match to d4f53b_ complexed with act, ca, cl, gol

     2. Domain d4f53b_: 4f53 B: [194987] automated match to d3cgha1 complexed with act, ca, cl, gol

3. Bacteroides thetaiotaomicron [TaxId:226186] [228123] (2 PDB entries)

   1. Domain for 3fdh:

      • Domain d3fdha_: 3fdh A: [264790] automated match to d4puca_ complexed with pg4

   2. Domains for 4mru:

      1. Domain d4mrua_: 4mru A: [228124] automated match to d3cgha1 complexed with edo, mg

      2. Domain d4mrub_: 4mru B: [235680] automated match to d4mrua_ complexed with edo, mg

4. Bacteroides thetaiotaomicron [TaxId:818] [189698] (3 PDB entries)

   1. Domains for 3ehm:

      1. Domain d3ehma_: 3ehm A: [245866] automated match to d3gzsa_ complexed with edo

      2. Domain d3ehmb_: 3ehm B: [245867] automated match to d3gzsa_ complexed with edo

   2. Domains for 3ehn:

      1. Domain d3ehna_: 3ehn A: [245868] automated match to d3gzsa_ complexed with nlc

      2. Domain d3ehnb_: 3ehn B: [245869] automated match to d3gzsa_ complexed with nlc

   3. Domains for 3sgh:

      1. Domain d3sgha_: 3sgh A: [185372] automated match to d3cgha1 complexed with cl

      2. Domain d3sghb_: 3sgh B: [185373] automated match to d3cgha1 complexed with cl

5. Bacteroides vulgatus [TaxId:435590] [226723] (1 PDB entry)

   • Domain for 4ler:

     • Domain d4lera_: 4ler A: [224659] automated match to d3ejna1 complexed with cl

6. Flavobacterium johnsoniae [TaxId:376686] [329438] (1 PDB entry)

   • Domains for 5j90:

     1. Domain d5j90a_: 5j90 A: [329514] automated match to d3gzsa_ complexed with edo

     2. Domain d5j90b_: 5j90 B: [329439] automated match to d3gzsa_ complexed with edo

7. Human (Homo sapiens) [TaxId:9606] [255451] (7 PDB entries)

   1. Domain for 2lni:

      • Domain d2lnia1: 2lni A:12-133 [242944] Other proteins in same PDB: d2lnia2 automated match to d4gcoa_

   2. Domain for 2oew:

      • Domain d2oewa_: 2oew A: [304278] automated match to d1zb1a_

   3. Domains for 3rau:

      1. Domain d3raua_: 3rau A: [341347] automated match to d5crua_ complexed with act, edo, gol

      2. Domain d3raub_: 3rau B: [341348] automated match to d5crua_ complexed with act, edo, gol

   4. Domains for 4kbq:

      1. Domain d4kbqa_: 4kbq A: [268316] Other proteins in same PDB: d4kbqc1, d4kbqc2, d4kbqd1, d4kbqd2 automated match to d2vyib_

      2. Domain d4kbqb_: 4kbq B: [268315] Other proteins in same PDB: d4kbqc1, d4kbqc2, d4kbqd1, d4kbqd2 automated match to d2vyib_

   5. Domains for 5cru:

      1. Domain d5crua_: 5cru A: [312892] automated match to d2oewa_

      2. Domain d5crub_: 5cru B: [312843] automated match to d2oewa_

      3. Domain d5cruc_: 5cru C: [312939] automated match to d2oewa_

      4. Domain d5crud_: 5cru D: [312835] automated match to d2oewa_

   6. Domains for 5mjz:

      1. Domain d5mjza_: 5mjz A: [337858] automated match to d5crua_

      2. Domain d5mjzb_: 5mjz B: [337873] automated match to d5crua_

   7. Domain for 5omp:

      • Domain d5ompa3: 5omp A:254-424 [341308] Other proteins in same PDB: d5ompa1, d5ompa2 automated match to d1kt1a1 complexed with so4

8. Nematode (Caenorhabditis elegans) [TaxId:6239] [226441] (1 PDB entry)

   • Domain for 4gco:

     • Domain d4gcoa_: 4gco A: [221840] automated match to d1elwb_

9. Norway rat (Rattus norvegicus) [TaxId:10116] [256317] (1 PDB entry)

   • Domains for 4j8e:

     1. Domain d4j8ea_: 4j8e A: [262751] automated match to d4j8eb_ complexed with gol

     2. Domain d4j8eb_: 4j8e B: [252843] automated match to d2buga1 complexed with gol

10. Saccharomyces cerevisiae [TaxId:4932] [340488] (1 PDB entry)

    • Domain for 5lyp:

      • Domain d5lypa1: 5lyp A:93-228 [340489] Other proteins in same PDB: d5lypa2 automated match to d2buga1 complexed with bo4

11. Thale cress (Arabidopsis thaliana) [TaxId:3702] [225165] (1 PDB entry)

    • Domain for 2if4:

      • Domain d2if4a2: 2if4 A:161-292 [204774] Other proteins in same PDB: d2if4a1 automated match to d1kt1a1

12. Zebrafish (Danio rerio) [TaxId:7955] [225069] (1 PDB entry)

    • Domain for 2f42:

      • Domain d2f42a1: 2f42 A:127-204 [204171] Other proteins in same PDB: d2f42a2 automated match to d2c2la1 complexed with cl

More info for Protein automated matches from a.118.8.0: automated matches

Timeline for Protein automated matches from a.118.8.0: automated matches:

• Protein automated matches from a.118.8.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from a.118.8.0: automated matches appears in SCOPe 2.05
  
• Protein automated matches from a.118.8.0: automated matches appears in SCOPe 2.07
  
• Protein automated matches from a.118.8.0: automated matches appears in the current release, SCOPe 2.08