SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily a.4.5: 'Winged helix' DNA-binding domain [46785] (86 families)
contains a small beta-sheet (wing)
Family a.4.5.5: ArsR-like transcriptional regulators [46801] (5 proteins)
The N- and C-terminal helical extensions to the common fold form the dimer interface
Protein automated matches [191027] (2 species)
not a true protein

Species:

Staphylococcus aureus [TaxId:1280] [188833] (5 PDB entries)
1. Domains for 2kjb:
  1. Domain d2kjba_: 2kjb A: [242535]
    automated match to d1r1uc_
  2. Domain d2kjbb_: 2kjb B: [242536]
    automated match to d1r1uc_
2. Domains for 2kjc:
  1. Domain d2kjca_: 2kjc A: [242537]
    automated match to d1r1uc_
  2. Domain d2kjcb_: 2kjc B: [242538]
    automated match to d1r1uc_
3. Domains for 3f72:
  1. Domain d3f72a_: 3f72 A: [175529]
    automated match to d1u2wa1
    complexed with na; mutant
  2. Domain d3f72b_: 3f72 B: [175530]
    automated match to d1u2wa1
    complexed with na; mutant
  3. Domain d3f72c_: 3f72 C: [175531]
    automated match to d1u2wa1
    complexed with na; mutant
  4. Domain d3f72d_: 3f72 D: [175532]
    automated match to d1u2wa1
    complexed with na; mutant
  5. Domain d3f72e_: 3f72 E: [175533]
    automated match to d1u2wa1
    complexed with na; mutant
  6. Domain d3f72f_: 3f72 F: [175534]
    automated match to d1u2wa1
    complexed with na; mutant
4. Domain for 6cda:
  - Domain d6cdaa_: 6cda A: [355452]
    automated match to d1r1uc_
    complexed with cl, gol, pg4, zn
5. Domains for 6cdb:
  1. Domain d6cdba_: 6cdb A: [354480]
    automated match to d1r1uc_
    complexed with cl, na, pg4, zn
  2. Domain d6cdbb_: 6cdb B: [354479]
    automated match to d1r1uc_
    complexed with cl, na, pg4, zn
Staphylococcus aureus [TaxId:158879] [193060] (1 PDB entry)
- Domains for 4ggg:
  1. Domain d4ggga_: 4ggg A: [193061]
    automated match to d1r1uc_
    complexed with cl, zn
  2. Domain d4gggb_: 4ggg B: [193062]
    automated match to d1r1uc_
    complexed with cl, zn

More info for Protein automated matches from a.4.5.5: ArsR-like transcriptional regulators

Timeline for Protein automated matches from a.4.5.5: ArsR-like transcriptional regulators:

Protein automated matches from a.4.5.5: ArsR-like transcriptional regulators first appeared in SCOPe 2.01
Protein automated matches from a.4.5.5: ArsR-like transcriptional regulators appears in SCOPe 2.07