Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2824768Fold b.140: Replicase NSP9 [101815] (1 superfamily)
    barrel; n=6, S=8, greek-key; similar to one trypsin-like protease barrel
  4. 2824769Superfamily b.140.1: Replicase NSP9 [101816] (2 families) (S)
  5. 2824770Family b.140.1.1: Replicase NSP9 [101817] (2 proteins)
    automatically mapped to Pfam PF08710
  6. 2824776Protein automated matches [191025] (2 species)
    not a true protein

Species:

  1. 2824777SARS coronavirus [TaxId:227859] [188828] (1 PDB entry)
  2. 2824782Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [382506] (7 PDB entries)
    1. Domains for 6w4b:
      1. 2824797Domain d6w4ba_: 6w4b A: [382545]
        Other proteins in same PDB: d6w4bb2
        automated match to d1qz8a_
      2. 2824798Domain d6w4bb1: 6w4b B:2-114 [382507]
        Other proteins in same PDB: d6w4bb2
        automated match to d1qz8a_
    2. Domain for 6w9q:
    3. Domains for 6wc1:
      1. 2824789Domain d6wc1a_: 6wc1 A: [392954]
        automated match to d1qz8a_
        complexed with so4
      2. 2824790Domain d6wc1b_: 6wc1 B: [392945]
        automated match to d1qz8a_
        complexed with so4
    4. Domains for 6wxd:
      1. 2824787Domain d6wxda_: 6wxd A: [386022]
        automated match to d1qz8a_
        complexed with so4
      2. 2824788Domain d6wxdb_: 6wxd B: [385977]
        automated match to d1qz8a_
        complexed with so4
    5. Domains for 7bwq:
      1. 2824791Domain d7bwqa_: 7bwq A: [417677]
        automated match to d6w4bb_
        complexed with so4
      2. 2824792Domain d7bwqb_: 7bwq B: [417678]
        automated match to d6w4bb_
        complexed with so4
      3. 2824793Domain d7bwqc_: 7bwq C: [417679]
        automated match to d6w4bb_
        complexed with so4
      4. 2824794Domain d7bwqd_: 7bwq D: [417680]
        automated match to d6w4bb_
        complexed with so4
      5. 2824795Domain d7bwqe_: 7bwq E: [417681]
        automated match to d6w4bb_
        complexed with so4
      6. 2824796Domain d7bwqf_: 7bwq F: [417682]
        automated match to d6w4bb_
        complexed with so4
    6. Domains for 7kri:
      1. 2824783Domain d7kria1: 7kri A:1-113 [418239]
        Other proteins in same PDB: d7kria2, d7krib2, d7kric2
        automated match to d6w4bb_
        protein/RNA complex; complexed with mli, so4, x0y
      2. 2824784Domain d7krib1: 7kri B:1-113 [418241]
        Other proteins in same PDB: d7kria2, d7krib2, d7kric2
        automated match to d6w4bb_
        protein/RNA complex; complexed with mli, so4, x0y
      3. 2824785Domain d7kric1: 7kri C:1-113 [418243]
        Other proteins in same PDB: d7kria2, d7krib2, d7kric2
        automated match to d6w4bb_
        protein/RNA complex; complexed with mli, so4, x0y
    7. Domains for 7n3k:
      1. 3085718Domain d7n3kd1: 7n3k D:1-113 [422035]
        Other proteins in same PDB: d7n3ka2, d7n3kb2, d7n3kc2, d7n3kd2, d7n3ke2, d7n3kf2, d7n3kh2
        automated match to d6wxda_
        protein/RNA complex; complexed with odn, so4
      2. 3085741Domain d7n3kf1: 7n3k F:1-113 [422058]
        Other proteins in same PDB: d7n3ka2, d7n3kb2, d7n3kc2, d7n3kd2, d7n3ke2, d7n3kf2, d7n3kh2
        automated match to d6wxda_
        protein/RNA complex; complexed with odn, so4
      3. 3085760Domain d7n3kh1: 7n3k H:1-113 [422077]
        Other proteins in same PDB: d7n3ka2, d7n3kb2, d7n3kc2, d7n3kd2, d7n3ke2, d7n3kf2, d7n3kh2
        automated match to d6wxda_
        protein/RNA complex; complexed with odn, so4
      4. 3085768Domain d7n3kc1: 7n3k C:1-113 [422085]
        Other proteins in same PDB: d7n3ka2, d7n3kb2, d7n3kc2, d7n3kd2, d7n3ke2, d7n3kf2, d7n3kh2
        automated match to d6wxda_
        protein/RNA complex; complexed with odn, so4
      5. 3085772Domain d7n3ke1: 7n3k E:1-113 [422089]
        Other proteins in same PDB: d7n3ka2, d7n3kb2, d7n3kc2, d7n3kd2, d7n3ke2, d7n3kf2, d7n3kh2
        automated match to d6wxda_
        protein/RNA complex; complexed with odn, so4
      6. 3085787Domain d7n3ka1: 7n3k A:1-113 [422104]
        Other proteins in same PDB: d7n3ka2, d7n3kb2, d7n3kc2, d7n3kd2, d7n3ke2, d7n3kf2, d7n3kh2
        automated match to d6wxda_
        protein/RNA complex; complexed with odn, so4
      7. 3085804Domain d7n3kb1: 7n3k B:1-113 [422121]
        Other proteins in same PDB: d7n3ka2, d7n3kb2, d7n3kc2, d7n3kd2, d7n3ke2, d7n3kf2, d7n3kh2
        automated match to d6wxda_
        protein/RNA complex; complexed with odn, so4

More info for Protein automated matches from b.140.1.1: Replicase NSP9

Timeline for Protein automated matches from b.140.1.1: Replicase NSP9: