Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2401367Fold b.74: Carbonic anhydrase [51068] (1 superfamily)
    single sheet; 10 strands
  4. 2401368Superfamily b.74.1: Carbonic anhydrase [51069] (2 families) (S)
  5. 2402282Family b.74.1.0: automated matches [191576] (1 protein)
    not a true family
  6. 2402283Protein automated matches [191011] (14 species)
    not a true protein

Species:

  1. 2402284Dioscorea japonica [TaxId:4673] [271037] (2 PDB entries)
    1. Domains for 4twl:
      1. 2402285Domain d4twla_: 4twl A: [271038]
        automated match to d3rg4a_
        complexed with asc, so4
      2. 2402286Domain d4twlb_: 4twl B: [271042]
        automated match to d3rg4a_
        complexed with asc, so4
    2. Domains for 4twm:
      1. 2402287Domain d4twma_: 4twm A: [271039]
        automated match to d3rg4a_
        complexed with so4
      2. 2402288Domain d4twmb_: 4twm B: [271041]
        automated match to d3rg4a_
        complexed with so4
  2. 2402289Dunaliella salina [TaxId:3046] [254971] (1 PDB entry)
  3. 2402292Fungus (Aspergillus oryzae) [TaxId:5062] [226089] (1 PDB entry)
  4. 2402295Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [270125] (2 PDB entries)
    1. Domains for 4xiw:
      1. 2402296Domain d4xiwa_: 4xiw A: [270148]
        automated match to d3mdza_
        complexed with 2hp, azm, zn
      2. 2402297Domain d4xiwb_: 4xiw B: [270145]
        automated match to d3mdza_
        complexed with 2hp, azm, zn
      3. 2402298Domain d4xiwc_: 4xiw C: [270140]
        automated match to d3mdza_
        complexed with 2hp, azm, zn
      4. 2402299Domain d4xiwd_: 4xiw D: [270146]
        automated match to d3mdza_
        complexed with 2hp, azm, zn
      5. 2402300Domain d4xiwe_: 4xiw E: [270143]
        automated match to d3mdza_
        complexed with 2hp, azm, zn
      6. 2402301Domain d4xiwf_: 4xiw F: [270141]
        automated match to d3mdza_
        complexed with 2hp, azm, zn
      7. 2402302Domain d4xiwg_: 4xiw G: [270142]
        automated match to d3mdza_
        complexed with 2hp, azm, zn
      8. 2402303Domain d4xiwh_: 4xiw H: [270139]
        automated match to d3mdza_
        complexed with 2hp, azm, zn
    2. Domains for 4xix:
      1. 2402304Domain d4xixa_: 4xix A: [270130]
        automated match to d3mdza_
        complexed with 2hp, zn
      2. 2402305Domain d4xixb_: 4xix B: [270128]
        automated match to d3mdza_
        complexed with 2hp, zn
      3. 2402306Domain d4xixc_: 4xix C: [270127]
        automated match to d3mdza_
        complexed with 2hp, zn
      4. 2402307Domain d4xixd_: 4xix D: [270126]
        automated match to d3mdza_
        complexed with 2hp, zn
      5. 2402308Domain d4xixe_: 4xix E: [270132]
        automated match to d3mdza_
        complexed with 2hp, zn
      6. 2402309Domain d4xixf_: 4xix F: [270137]
        automated match to d3mdza_
        complexed with 2hp, zn
      7. 2402310Domain d4xixg_: 4xix G: [270144]
        automated match to d3mdza_
        complexed with 2hp, zn
      8. 2402311Domain d4xixh_: 4xix H: [270138]
        automated match to d3mdza_
        complexed with 2hp, zn
  5. 2402312Helicobacter pylori [TaxId:563041] [275714] (1 PDB entry)
  6. 2402315Helicobacter pylori [TaxId:85962] [274562] (6 PDB entries)
    1. Domains for 4ygf:
      1. 2402316Domain d4ygfa_: 4ygf A: [274568]
        automated match to d1koqa_
        complexed with azm, cl, gol, zn
      2. 2402317Domain d4ygfb_: 4ygf B: [274567]
        automated match to d1koqa_
        complexed with azm, cl, gol, zn
      3. 2402318Domain d4ygfc_: 4ygf C: [274564]
        automated match to d1koqa_
        complexed with azm, cl, gol, zn
      4. 2402319Domain d4ygfd_: 4ygf D: [274569]
        automated match to d1koqa_
        complexed with azm, cl, gol, zn
      5. 2402320Domain d4ygfe_: 4ygf E: [274565]
        automated match to d1koqa_
        complexed with azm, cl, gol, zn
      6. 2402321Domain d4ygff_: 4ygf F: [274566]
        automated match to d1koqa_
        complexed with azm, cl, gol, zn
      7. 2402322Domain d4ygfg_: 4ygf G: [274572]
        automated match to d1koqa_
        complexed with azm, cl, gol, zn
      8. 2402323Domain d4ygfh_: 4ygf H: [274570]
        automated match to d1koqa_
        complexed with azm, cl, gol, zn
    2. Domains for 4yha:
      1. 2402332Domain d4yhaa_: 4yha A: [274571]
        automated match to d1koqa_
        complexed with cl, gol, mzm, zn
      2. 2402333Domain d4yhab_: 4yha B: [274574]
        automated match to d1koqa_
        complexed with cl, gol, mzm, zn
      3. 2402334Domain d4yhac_: 4yha C: [274573]
        automated match to d1koqa_
        complexed with cl, gol, mzm, zn
      4. 2402335Domain d4yhad_: 4yha D: [274575]
        automated match to d1koqa_
        complexed with cl, gol, mzm, zn
      5. 2402336Domain d4yhae_: 4yha E: [274576]
        automated match to d1koqa_
        complexed with cl, gol, mzm, zn
      6. 2402337Domain d4yhaf_: 4yha F: [274577]
        automated match to d1koqa_
        complexed with cl, gol, mzm, zn
      7. 2402338Domain d4yhag_: 4yha G: [274578]
        automated match to d1koqa_
        complexed with cl, gol, mzm, zn
      8. 2402339Domain d4yhah_: 4yha H: [274579]
        automated match to d1koqa_
        complexed with cl, gol, mzm, zn
    3. Domains for 5tt3:
      1. 2402324Domain d5tt3a_: 5tt3 A: [338966]
        automated match to d4ygfg_
        complexed with cl, ezl, gol, zn
      2. 2402325Domain d5tt3b_: 5tt3 B: [338969]
        automated match to d4ygfg_
        complexed with cl, ezl, gol, zn
      3. 2402326Domain d5tt3c_: 5tt3 C: [338967]
        automated match to d4ygfg_
        complexed with cl, ezl, gol, zn
      4. 2402327Domain d5tt3d_: 5tt3 D: [338970]
        automated match to d4ygfg_
        complexed with cl, ezl, gol, zn
      5. 2402328Domain d5tt3e_: 5tt3 E: [338971]
        automated match to d4ygfg_
        complexed with cl, ezl, gol, zn
      6. 2402329Domain d5tt3f_: 5tt3 F: [338972]
        automated match to d4ygfg_
        complexed with cl, ezl, gol, zn
      7. 2402330Domain d5tt3g_: 5tt3 G: [338974]
        automated match to d4ygfg_
        complexed with cl, ezl, gol, zn
      8. 2402331Domain d5tt3h_: 5tt3 H: [338995]
        automated match to d4ygfg_
        complexed with cl, ezl, gol, zn
    4. Domains for 5tt8:
      1. 2402340Domain d5tt8a_: 5tt8 A: [338992]
        automated match to d4ygfg_
        complexed with cl, d8w, gol, zn
      2. 2402341Domain d5tt8b_: 5tt8 B: [338985]
        automated match to d4ygfg_
        complexed with cl, d8w, gol, zn
      3. 2402342Domain d5tt8c_: 5tt8 C: [338984]
        automated match to d4ygfg_
        complexed with cl, d8w, gol, zn
      4. 2402343Domain d5tt8d_: 5tt8 D: [338989]
        automated match to d4ygfg_
        complexed with cl, d8w, gol, zn
      5. 2402344Domain d5tt8e_: 5tt8 E: [338983]
        automated match to d4ygfg_
        complexed with cl, d8w, gol, zn
      6. 2402345Domain d5tt8f_: 5tt8 F: [338986]
        automated match to d4ygfg_
        complexed with cl, d8w, gol, zn
      7. 2402346Domain d5tt8g_: 5tt8 G: [339001]
        automated match to d4ygfg_
        complexed with cl, d8w, gol, zn
      8. 2402347Domain d5tt8h_: 5tt8 H: [338990]
        automated match to d4ygfg_
        complexed with cl, d8w, gol, zn
    5. Domains for 5tuo:
      1. 2402348Domain d5tuoa_: 5tuo A: [338993]
        automated match to d4ygfg_
        complexed with 1sa, cl, zn
      2. 2402349Domain d5tuob_: 5tuo B: [338988]
        automated match to d4ygfg_
        complexed with 1sa, cl, zn
      3. 2402350Domain d5tuoc_: 5tuo C: [338994]
        automated match to d4ygfg_
        complexed with 1sa, cl, zn
      4. 2402351Domain d5tuod_: 5tuo D: [338980]
        automated match to d4ygfg_
        complexed with 1sa, cl, zn
      5. 2402352Domain d5tuoe_: 5tuo E: [339004]
        automated match to d4ygfg_
        complexed with 1sa, cl, zn
      6. 2402353Domain d5tuof_: 5tuo F: [338996]
        automated match to d4ygfg_
        complexed with 1sa, cl, zn
      7. 2402354Domain d5tuog_: 5tuo G: [338987]
        automated match to d4ygfg_
        complexed with 1sa, cl, zn
      8. 2402355Domain d5tuoh_: 5tuo H: [339000]
        automated match to d4ygfg_
        complexed with 1sa, cl, zn
    6. Domains for 5tv3:
      1. 2402356Domain d5tv3a_: 5tv3 A: [339305]
        automated match to d4ygfg_
        complexed with 7l3, cl, gol, zn
      2. 2402357Domain d5tv3b_: 5tv3 B: [339334]
        automated match to d4ygfg_
        complexed with 7l3, cl, gol, zn
      3. 2402358Domain d5tv3c_: 5tv3 C: [339308]
        automated match to d4ygfg_
        complexed with 7l3, cl, gol, zn
      4. 2402359Domain d5tv3d_: 5tv3 D: [339318]
        automated match to d4ygfg_
        complexed with 7l3, cl, gol, zn
      5. 2402360Domain d5tv3e_: 5tv3 E: [339317]
        automated match to d4ygfg_
        complexed with 7l3, cl, gol, zn
      6. 2402361Domain d5tv3f_: 5tv3 F: [339311]
        automated match to d4ygfg_
        complexed with 7l3, cl, gol, zn
      7. 2402362Domain d5tv3g_: 5tv3 G: [339310]
        automated match to d4ygfg_
        complexed with 7l3, cl, gol, zn
      8. 2402363Domain d5tv3h_: 5tv3 H: [339336]
        automated match to d4ygfg_
        complexed with 7l3, cl, gol, zn
  7. 2402364Human (Homo sapiens) [TaxId:9606] [188766] (12 PDB entries)
    1. Domains for 3fe4:
      1. 2402378Domain d3fe4a_: 3fe4 A: [175720]
        automated match to d1rj5b_
        complexed with gol, mg
      2. 2402379Domain d3fe4b_: 3fe4 B: [175721]
        automated match to d1rj5b_
        complexed with gol, mg
    2. Domains for 3iai:
      1. 2402365Domain d3iaia1: 3iai A:0A-261 [178211]
        Other proteins in same PDB: d3iaia2
        automated match to d1rj5a_
        complexed with azm, gol, po4, trs, zn
      2. 2402366Domain d3iaib_: 3iai B: [178212]
        Other proteins in same PDB: d3iaia2
        automated match to d1rj5a_
        complexed with azm, gol, po4, trs, zn
      3. 2402367Domain d3iaic_: 3iai C: [178213]
        Other proteins in same PDB: d3iaia2
        automated match to d1rj5a_
        complexed with azm, gol, po4, trs, zn
      4. 2402368Domain d3iaid_: 3iai D: [178214]
        Other proteins in same PDB: d3iaia2
        automated match to d1rj5a_
        complexed with azm, gol, po4, trs, zn
    3. Domains for 3jxf:
      1. 2402384Domain d3jxfa_: 3jxf A: [178906]
        Other proteins in same PDB: d3jxfb2
        automated match to d1jcza_
      2. 2402385Domain d3jxfb1: 3jxf B:34-301 [178907]
        Other proteins in same PDB: d3jxfb2
        automated match to d1jcza_
    4. Domain for 3jxh:
    5. Domains for 3s97:
      1. 2402390Domain d3s97a_: 3s97 A: [185321]
        Other proteins in same PDB: d3s97c1, d3s97d1, d3s97d2
        automated match to d1jcza_
        complexed with nag
      2. 2402391Domain d3s97b_: 3s97 B: [185322]
        Other proteins in same PDB: d3s97c1, d3s97d1, d3s97d2
        automated match to d1jcza_
        complexed with nag
    6. Domain for 4lu3:
    7. Domain for 5cjf:
    8. Domains for 5dvx:
      1. 2402369Domain d5dvxa_: 5dvx A: [320311]
        automated match to d3iaib_
        complexed with cl, gol, trs, zn
      2. 2402370Domain d5dvxb_: 5dvx B: [320393]
        automated match to d3iaib_
        complexed with cl, gol, trs, zn
    9. Domains for 5e5r:
      1. 2402392Domain d5e5ra_: 5e5r A: [321913]
        Other proteins in same PDB: d5e5rb1, d5e5rb2, d5e5rd1, d5e5rd2
        automated match to d3kldb_
        complexed with fmt, mli
      2. 2402393Domain d5e5rc_: 5e5r C: [321892]
        Other proteins in same PDB: d5e5rb1, d5e5rb2, d5e5rd1, d5e5rd2
        automated match to d3kldb_
        complexed with fmt, mli
    10. Domains for 5fl4:
      1. 2402373Domain d5fl4a_: 5fl4 A: [279321]
        automated match to d3iaia_
        complexed with 9fk, acy, gol, zn
      2. 2402374Domain d5fl4b_: 5fl4 B: [279317]
        automated match to d3iaia_
        complexed with 9fk, acy, gol, zn
      3. 2402375Domain d5fl4c_: 5fl4 C: [279324]
        automated match to d3iaia_
        complexed with 9fk, acy, gol, zn
      4. 2402376Domain d5fl4d_: 5fl4 D: [279320]
        automated match to d3iaia_
        complexed with 9fk, acy, gol, zn
    11. Domains for 5fl5:
      1. 2402386Domain d5fl5a_: 5fl5 A: [279318]
        automated match to d3iaia_
        complexed with 82e, gol, so4, trs, zn
      2. 2402387Domain d5fl5b_: 5fl5 B: [279322]
        automated match to d3iaia_
        complexed with 82e, gol, so4, trs, zn
      3. 2402388Domain d5fl5c_: 5fl5 C: [279328]
        automated match to d3iaia_
        complexed with 82e, gol, so4, trs, zn
      4. 2402389Domain d5fl5d_: 5fl5 D: [279327]
        automated match to d3iaia_
        complexed with 82e, gol, so4, trs, zn
    12. Domains for 5fl6:
      1. 2402380Domain d5fl6a_: 5fl6 A: [279325]
        automated match to d3iaia_
        complexed with acy, gol, y0r, zn
      2. 2402381Domain d5fl6b_: 5fl6 B: [279323]
        automated match to d3iaia_
        complexed with acy, gol, y0r, zn
      3. 2402382Domain d5fl6c_: 5fl6 C: [279326]
        automated match to d3iaia_
        complexed with acy, gol, y0r, zn
      4. 2402383Domain d5fl6d_: 5fl6 D: [279319]
        automated match to d3iaia_
        complexed with acy, gol, y0r, zn
  8. 2402394Mouse (Mus musculus) [TaxId:10090] [189158] (3 PDB entries)
    1. Domains for 3jxg:
      1. 2402395Domain d3jxga_: 3jxg A: [178908]
        automated match to d1rj5a_
      2. 2402396Domain d3jxgb_: 3jxg B: [178909]
        automated match to d1rj5a_
      3. 2402397Domain d3jxgc_: 3jxg C: [178910]
        automated match to d1rj5a_
      4. 2402398Domain d3jxgd_: 3jxg D: [178911]
        automated match to d1rj5a_
    2. Domain for 3kld:
    3. Domains for 5e5u:
      1. 2402399Domain d5e5ua_: 5e5u A: [321974]
        Other proteins in same PDB: d5e5ub1, d5e5ub2, d5e5ub3, d5e5ud1, d5e5ud2, d5e5ud3
        automated match to d3kldb_
        complexed with 1ps, acy, fmt, mli, mlt
      2. 2402400Domain d5e5uc_: 5e5u C: [321945]
        Other proteins in same PDB: d5e5ub1, d5e5ub2, d5e5ub3, d5e5ud1, d5e5ud2, d5e5ud3
        automated match to d3kldb_
        complexed with 1ps, acy, fmt, mli, mlt
  9. 2402402Photobacterium profundum [TaxId:298386] [327045] (1 PDB entry)
  10. 2402404Thermovibrio ammonificans [TaxId:228745] [259326] (2 PDB entries)
    1. Domains for 4c3t:
      1. 2402411Domain d4c3ta_: 4c3t A: [259330]
        automated match to d1koqa_
        complexed with cl, zn
      2. 2402412Domain d4c3tb_: 4c3t B: [259329]
        automated match to d1koqa_
        complexed with cl, zn
    2. Domains for 4uov:
      1. 2402405Domain d4uova_: 4uov A: [267460]
        automated match to d4c3ta_
        complexed with azm, b3p, cl, pe3, peg, pg5, pge, so4, tla, zn
      2. 2402406Domain d4uovb_: 4uov B: [267461]
        automated match to d4c3ta_
        complexed with azm, b3p, cl, pe3, peg, pg5, pge, so4, tla, zn
      3. 2402407Domain d4uovc_: 4uov C: [267462]
        automated match to d4c3ta_
        complexed with azm, b3p, cl, pe3, peg, pg5, pge, so4, tla, zn
      4. 2402408Domain d4uovd_: 4uov D: [267463]
        automated match to d4c3ta_
        complexed with azm, b3p, cl, pe3, peg, pg5, pge, so4, tla, zn
      5. 2402409Domain d4uove_: 4uov E: [267464]
        automated match to d4c3ta_
        complexed with azm, b3p, cl, pe3, peg, pg5, pge, so4, tla, zn
      6. 2402410Domain d4uovf_: 4uov F: [267465]
        automated match to d4c3ta_
        complexed with azm, b3p, cl, pe3, peg, pg5, pge, so4, tla, zn
  11. 2402413Thermovibrio ammonificans [TaxId:648996] [260302] (1 PDB entry)
  12. 2402416Thiomicrospira crunogena [TaxId:317025] [275505] (1 PDB entry)
  13. 2402421Vaccinia virus [TaxId:10245] [256246] (5 PDB entries)
    1. Domain for 4e9o:
    2. Domains for 4etq:
      1. 2402423Domain d4etqc_: 4etq C: [240120]
        Other proteins in same PDB: d4etqb1, d4etqb2, d4etql1, d4etql2
        automated match to d1dmya_
        complexed with cl, edo, gol, scn
      2. 2402424Domain d4etqx_: 4etq X: [240121]
        Other proteins in same PDB: d4etqb1, d4etqb2, d4etql1, d4etql2
        automated match to d1dmya_
        complexed with cl, edo, gol, scn
    3. Domains for 5ush:
      1. 2402425Domain d5usha_: 5ush A: [339323]
        Other proteins in same PDB: d5ushe1, d5ushe2, d5ushl1, d5ushl2, d5ushx2
        automated match to d4etqx_
      2. 2402426Domain d5ushx1: 5ush X:2-234 [339330]
        Other proteins in same PDB: d5ushe1, d5ushe2, d5ushl1, d5ushl2, d5ushx2
        automated match to d4etqx_
    4. Domains for 5usl:
      1. 2402427Domain d5usla_: 5usl A: [339328]
        Other proteins in same PDB: d5uslc1, d5uslc2, d5usll1, d5usll2
        automated match to d4etqx_
      2. 2402428Domain d5uslx_: 5usl X: [339329]
        Other proteins in same PDB: d5uslc1, d5uslc2, d5usll1, d5usll2
        automated match to d4etqx_
    5. Domains for 6b9j:
      1. 2402429Domain d6b9jx1: 6b9j X:2-235 [341776]
        Other proteins in same PDB: d6b9jb1, d6b9jb2, d6b9jl1, d6b9jl2, d6b9jx2, d6b9jy2
        automated match to d4etqx_
        complexed with gol, na
      2. 2402430Domain d6b9jy1: 6b9j Y:2-235 [341765]
        Other proteins in same PDB: d6b9jb1, d6b9jb2, d6b9jl1, d6b9jl2, d6b9jx2, d6b9jy2
        automated match to d4etqx_
        complexed with gol, na
  14. 3050771Persephonella marina [TaxId:309805] [350833] (1 PDB entry)

More info for Protein automated matches from b.74.1.0: automated matches

Timeline for Protein automated matches from b.74.1.0: automated matches: