SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

Superfamily d.58.58: CRISPR associated protein Cas2-like [143430] (2 families)

(S)

contains extra C-terminal beta-strand that integrates into the beta-sheet of the other subunit in the homodimer, a probable biological unit of this superfamily

Family d.58.58.0: automated matches [191564] (1 protein)
not a true family
Protein automated matches [190980] (5 species)
not a true protein

Species:

Bacillus halodurans [TaxId:272558] [267929] (3 PDB entries)
1. Domain for 4es1:
  - Domain d4es1a1: 4es1 A:1-87 [266237]
    Other proteins in same PDB: d4es1a2
    automated match to d4qr0a_
2. Domain for 4es2:
  - Domain d4es2a1: 4es2 A:1-87 [266238]
    Other proteins in same PDB: d4es2a2
    automated match to d4qr0a_
3. Domain for 4es3:
  - Domain d4es3a1: 4es3 A:1-86 [266239]
    Other proteins in same PDB: d4es3a2
    automated match to d4qr0a_
    complexed with edo
Desulfovibrio vulgaris [TaxId:882] [267863] (1 PDB entry)
- Domains for 3oq2:
  1. Domain d3oq2a_: 3oq2 A: [265118]
    automated match to d4qr0a_
    complexed with cit, cl, na, so4, trs
  2. Domain d3oq2b_: 3oq2 B: [265119]
    automated match to d4qr0a_
    complexed with cit, cl, na, so4, trs
Streptococcus pyogenes [TaxId:301447] [261263] (3 PDB entries)
1. Domains for 4qr0:
  1. Domain d4qr0a_: 4qr0 A: [261264]
    automated match to d2i0xa1
  2. Domain d4qr0b_: 4qr0 B: [263778]
    automated match to d4qr0a_
2. Domains for 4qr1:
  1. Domain d4qr1a_: 4qr1 A: [267332]
    automated match to d4qr0a_
  2. Domain d4qr1b_: 4qr1 B: [267333]
    automated match to d4qr0a_
3. Domains for 4qr2:
  1. Domain d4qr2a_: 4qr2 A: [267334]
    automated match to d4qr0a_
  2. Domain d4qr2b_: 4qr2 B: [267335]
    automated match to d4qr0a_
Sulfolobus solfataricus [TaxId:2287] [188660] (1 PDB entry)
- Domain for 3exc:
  - Domain d3excx_: 3exc X: [175288]
    automated match to d2i8ea1
    complexed with cl, na
Xanthomonas albilineans [TaxId:380358] [340246] (2 PDB entries)
1. Domains for 5h1o:
  1. Domain d5h1oa_: 5h1o A: [340252]
    automated match to d3oq2b_
    complexed with act
  2. Domain d5h1ob_: 5h1o B: [340253]
    automated match to d3oq2b_
    complexed with act
2. Domains for 5h1p:
  1. Domain d5h1pa_: 5h1p A: [340248]
    automated match to d3oq2b_
    complexed with act
  2. Domain d5h1pb_: 5h1p B: [340247]
    automated match to d3oq2b_
    complexed with act

More info for Protein automated matches from d.58.58.0: automated matches

Timeline for Protein automated matches from d.58.58.0: automated matches:

Protein automated matches from d.58.58.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from d.58.58.0: automated matches appears in SCOPe 2.05
Protein automated matches from d.58.58.0: automated matches appears in SCOPe 2.07
Protein automated matches from d.58.58.0: automated matches appears in the current release, SCOPe 2.08