Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily d.58.58: CRISPR associated protein Cas2-like [143430] (2 families) (S)
    contains extra C-terminal beta-strand that integrates into the beta-sheet of the other subunit in the homodimer, a probable biological unit of this superfamily
  5. Family d.58.58.0: automated matches [191564] (1 protein)
    not a true family
  6. Protein automated matches [190980] (6 species)
    not a true protein

Species:

  1. Bacillus halodurans [TaxId:272558] [267929] (3 PDB entries)
    1. Domain for 4es1:
    2. Domain for 4es2:
    3. Domain for 4es3:
  2. Desulfovibrio vulgaris [TaxId:882] [267863] (1 PDB entry)
  3. Pyrococcus horikoshii [TaxId:70601] [385756] (1 PDB entry)
  4. Streptococcus pyogenes [TaxId:301447] [261263] (3 PDB entries)
    1. Domains for 4qr0:
      1. Domain d4qr0a_: 4qr0 A: [261264]
        automated match to d2i0xa1
      2. Domain d4qr0b_: 4qr0 B: [263778]
        automated match to d4qr0a_
    2. Domains for 4qr1:
      1. Domain d4qr1a_: 4qr1 A: [267332]
        automated match to d4qr0a_
      2. Domain d4qr1b_: 4qr1 B: [267333]
        automated match to d4qr0a_
    3. Domains for 4qr2:
      1. Domain d4qr2a_: 4qr2 A: [267334]
        automated match to d4qr0a_
      2. Domain d4qr2b_: 4qr2 B: [267335]
        automated match to d4qr0a_
  5. Sulfolobus solfataricus [TaxId:2287] [188660] (1 PDB entry)
  6. Xanthomonas albilineans [TaxId:380358] [340246] (2 PDB entries)
    1. Domains for 5h1o:
      1. Domain d5h1oa_: 5h1o A: [340252]
        automated match to d3oq2b_
        complexed with act
      2. Domain d5h1ob_: 5h1o B: [340253]
        automated match to d3oq2b_
        complexed with act
    2. Domains for 5h1p:
      1. Domain d5h1pa_: 5h1p A: [340248]
        automated match to d3oq2b_
        complexed with act
      2. Domain d5h1pb_: 5h1p B: [340247]
        automated match to d3oq2b_
        complexed with act

More info for Protein automated matches from d.58.58.0: automated matches

Timeline for Protein automated matches from d.58.58.0: automated matches: