Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2358952Superfamily b.1.2: Fibronectin type III [49265] (2 families) (S)
  5. 2359497Family b.1.2.0: automated matches [191562] (1 protein)
    not a true family
  6. 2359498Protein automated matches [190976] (4 species)
    not a true protein

Species:

  1. 2359499Artificial gene [TaxId:32630] [233328] (6 PDB entries)
    1. Domains for 3qht:
      1. 2359511Domain d3qhtc_: 3qht C: [233329]
        Other proteins in same PDB: d3qhta_, d3qhtb_
        automated match to d2ck2a_
        complexed with gol
      2. 2359512Domain d3qhtd_: 3qht D: [233330]
        Other proteins in same PDB: d3qhta_, d3qhtb_
        automated match to d2ck2a_
        complexed with gol
    2. Domains for 4lpt:
      1. 2359505Domain d4lpta1: 4lpt A:3-95 [236444]
        Other proteins in same PDB: d4lpta2, d4lptb2, d4lptc2, d4lptd2, d4lpte2
        automated match to d2cuma1
      2. 2359506Domain d4lptb1: 4lpt B:2-95 [240495]
        Other proteins in same PDB: d4lpta2, d4lptb2, d4lptc2, d4lptd2, d4lpte2
        automated match to d4lpta_
      3. 2359507Domain d4lptc1: 4lpt C:1-95 [240496]
        Other proteins in same PDB: d4lpta2, d4lptb2, d4lptc2, d4lptd2, d4lpte2
        automated match to d4lpta_
      4. 2359508Domain d4lptd1: 4lpt D:6-95 [240497]
        Other proteins in same PDB: d4lpta2, d4lptb2, d4lptc2, d4lptd2, d4lpte2
        automated match to d4lpta_
      5. 2359509Domain d4lpte1: 4lpt E:1-95 [240498]
        Other proteins in same PDB: d4lpta2, d4lptb2, d4lptc2, d4lptd2, d4lpte2
        automated match to d4lpta_
      6. 2359510Domain d4lptf_: 4lpt F: [240499]
        Other proteins in same PDB: d4lpta2, d4lptb2, d4lptc2, d4lptd2, d4lpte2
        automated match to d4lpta_
    3. Domains for 4lpv:
      1. 2359500Domain d4lpva1: 4lpv A:1-91 [236445]
        Other proteins in same PDB: d4lpva2, d4lpvb2
        automated match to d2cuma1
        complexed with trs
      2. 2359501Domain d4lpvb1: 4lpv B:1-91 [240500]
        Other proteins in same PDB: d4lpva2, d4lpvb2
        automated match to d4lpva_
        complexed with trs
    4. Domains for 4lpw:
      1. 2359513Domain d4lpwa1: 4lpw A:2-92 [236449]
        Other proteins in same PDB: d4lpwa2, d4lpwb2
        automated match to d1tena_
      2. 2359514Domain d4lpwb1: 4lpw B:2-92 [240501]
        Other proteins in same PDB: d4lpwa2, d4lpwb2
        automated match to d4lpwa_
    5. Domain for 4lpx:
    6. Domains for 4lpy:
      1. 2359502Domain d4lpya1: 4lpy A:2-93 [236446]
        Other proteins in same PDB: d4lpya2, d4lpyb2
        automated match to d1tena_
        complexed with na
      2. 2359503Domain d4lpyb1: 4lpy B:3-93 [236447]
        Other proteins in same PDB: d4lpya2, d4lpyb2
        automated match to d1tena_
        complexed with na
  2. 2359515Chicken (Gallus gallus) [TaxId:9031] [267928] (2 PDB entries)
    1. Domains for 4eq2:
      1. 2359518Domain d4eq2a1: 4eq2 A:2-100 [266233]
        automated match to d1fg9d1
      2. 2359519Domain d4eq2a2: 4eq2 A:101-207 [266234]
        automated match to d1fg9d2
    2. Domains for 4eq3:
      1. 2359516Domain d4eq3a1: 4eq3 A:2-100 [266235]
        automated match to d1fg9d1
      2. 2359517Domain d4eq3a2: 4eq3 A:101-207 [266236]
        automated match to d1fg9d2
  3. 2359520Escherichia coli [TaxId:562] [277099] (1 PDB entry)
  4. 2359522Human (Homo sapiens) [TaxId:9606] [188649] (56 PDB entries)
    1. Domain for 2arw:
    2. Domains for 2ck2:
      1. 2359544Domain d2ck2a_: 2ck2 A: [203800]
        automated match to d2cuma1
        complexed with ace; mutant
      2. 2359545Domain d2ck2b_: 2ck2 B: [203801]
        automated match to d2cuma1
        complexed with ace; mutant
    3. Domain for 2db8:
    4. Domain for 2dbj:
    5. Domain for 2dm4:
    6. Domain for 2dmk:
    7. Domain for 2doc:
    8. Domain for 2e7h:
    9. Domain for 2ed7:
    10. Domain for 2ed9:
    11. Domain for 2edd:
    12. Domain for 2ede:
    13. Domain for 2edx:
    14. Domain for 2edy:
    15. Domain for 2ee2:
    16. Domain for 2ee3:
    17. Domain for 2kbg:
    18. Domain for 2ocf:
    19. Domain for 2yux:
    20. Domains for 3b83:
      1. 2359546Domain d3b83a1: 3b83 A:0-89 [172478]
        Other proteins in same PDB: d3b83a2, d3b83b2, d3b83c2, d3b83d2, d3b83e2, d3b83f2, d3b83g2, d3b83h2
        automated match to d1tena_
      2. 2359547Domain d3b83b1: 3b83 B:1-89 [172479]
        Other proteins in same PDB: d3b83a2, d3b83b2, d3b83c2, d3b83d2, d3b83e2, d3b83f2, d3b83g2, d3b83h2
        automated match to d1tena_
      3. 2359548Domain d3b83c1: 3b83 C:0-89 [172480]
        Other proteins in same PDB: d3b83a2, d3b83b2, d3b83c2, d3b83d2, d3b83e2, d3b83f2, d3b83g2, d3b83h2
        automated match to d1tena_
      4. 2359549Domain d3b83d1: 3b83 D:1-89 [172481]
        Other proteins in same PDB: d3b83a2, d3b83b2, d3b83c2, d3b83d2, d3b83e2, d3b83f2, d3b83g2, d3b83h2
        automated match to d1tena_
      5. 2359550Domain d3b83e1: 3b83 E:0-89 [172482]
        Other proteins in same PDB: d3b83a2, d3b83b2, d3b83c2, d3b83d2, d3b83e2, d3b83f2, d3b83g2, d3b83h2
        automated match to d1tena_
      6. 2359551Domain d3b83f1: 3b83 F:1-89 [172483]
        Other proteins in same PDB: d3b83a2, d3b83b2, d3b83c2, d3b83d2, d3b83e2, d3b83f2, d3b83g2, d3b83h2
        automated match to d1tena_
      7. 2359552Domain d3b83g1: 3b83 G:0-89 [172484]
        Other proteins in same PDB: d3b83a2, d3b83b2, d3b83c2, d3b83d2, d3b83e2, d3b83f2, d3b83g2, d3b83h2
        automated match to d1tena_
      8. 2359553Domain d3b83h1: 3b83 H:0-89 [172485]
        Other proteins in same PDB: d3b83a2, d3b83b2, d3b83c2, d3b83d2, d3b83e2, d3b83f2, d3b83g2, d3b83h2
        automated match to d1tena_
    21. Domains for 3k2m:
      1. 2359536Domain d3k2mc_: 3k2m C: [232662]
        Other proteins in same PDB: d3k2ma_, d3k2mb_
        automated match to d2ck2a_
        complexed with po4
      2. 2359537Domain d3k2md_: 3k2m D: [232663]
        Other proteins in same PDB: d3k2ma_, d3k2mb_
        automated match to d2ck2a_
        complexed with po4
    22. Domains for 3lpw:
      1. 2359524Domain d3lpwa1: 3lpw A:4-102 [247492]
        Other proteins in same PDB: d3lpwa3, d3lpwb3
        automated match to d1bpva_
        complexed with mpd, mrd
      2. 2359525Domain d3lpwa2: 3lpw A:103-197 [247493]
        Other proteins in same PDB: d3lpwa3, d3lpwb3
        automated match to d1bpva_
        complexed with mpd, mrd
      3. 2359526Domain d3lpwb1: 3lpw B:4-102 [247494]
        Other proteins in same PDB: d3lpwa3, d3lpwb3
        automated match to d1bpva_
        complexed with mpd, mrd
      4. 2359527Domain d3lpwb2: 3lpw B:103-197 [247495]
        Other proteins in same PDB: d3lpwa3, d3lpwb3
        automated match to d1bpva_
        complexed with mpd, mrd
    23. Domain for 3qwq:
    24. Domains for 3r8q:
      1. 2359540Domain d3r8qa1: 3r8q A:1-92 [249064]
        automated match to d1fnfa2
      2. 2359541Domain d3r8qa2: 3r8q A:93-182 [249065]
        automated match to d1fnfa1
      3. 2359542Domain d3r8qa3: 3r8q A:183-271 [249066]
        automated match to d1fnfa3
    25. Domains for 3rzw:
      1. 2359558Domain d3rzwa_: 3rzw A: [233510]
        Other proteins in same PDB: d3rzwc_, d3rzwd_
        automated match to d2ck2a_
        complexed with gol
      2. 2359559Domain d3rzwb_: 3rzw B: [239707]
        Other proteins in same PDB: d3rzwc_, d3rzwd_
        automated match to d3rzwa_
        complexed with gol
    26. Domain for 3t04:
    27. Domain for 3uyo:
    28. Domains for 3wih:
      1. 2359534Domain d3wiha_: 3wih A: [268021]
        Other proteins in same PDB: d3wihl1, d3wihl2, d3wihm1, d3wihm2
        automated match to d4n5ua_
        complexed with gol
      2. 2359535Domain d3wihb_: 3wih B: [268022]
        Other proteins in same PDB: d3wihl1, d3wihl2, d3wihm1, d3wihm2
        automated match to d4n5ua_
        complexed with gol
    29. Domain for 4mmy:
    30. Domain for 4mmz:
    31. Domain for 4n5u:
    32. Domain for 4n68:
    33. Domains for 4o00:
      1. 2359538Domain d4o00a1: 4o00 A:4-104 [268421]
        Other proteins in same PDB: d4o00a2, d4o00b2
        automated match to d1bpva_
      2. 2359539Domain d4o00b1: 4o00 B:4-106 [268419]
        Other proteins in same PDB: d4o00a2, d4o00b2
        automated match to d1bpva_
    34. Domains for 4ov6:
      1. 2359588Domain d4ov6f_: 4ov6 F: [258048]
        Other proteins in same PDB: d4ov6b_, d4ov6e_
        automated match to d2ck2a_
        complexed with edo, pg4
      2. 2359589Domain d4ov6g_: 4ov6 G: [263354]
        Other proteins in same PDB: d4ov6b_, d4ov6e_
        automated match to d4ov6f_
        complexed with edo, pg4
    35. Domains for 4s0s:
      1. 2359580Domain d4s0sd_: 4s0s D: [269365]
        Other proteins in same PDB: d4s0sa_, d4s0sb_
        automated match to d4ov6f_
      2. 2359581Domain d4s0se_: 4s0s E: [269366]
        Other proteins in same PDB: d4s0sa_, d4s0sb_
        automated match to d4ov6f_
    36. Domains for 4s0t:
      1. 2359596Domain d4s0td_: 4s0t D: [269368]
        Other proteins in same PDB: d4s0ta_, d4s0tb_
        automated match to d4ov6f_
        complexed with 40u
      2. 2359597Domain d4s0te_: 4s0t E: [269369]
        Other proteins in same PDB: d4s0ta_, d4s0tb_
        automated match to d4ov6f_
        complexed with 40u
    37. Domains for 5a43:
      1. 2359582Domain d5a43c_: 5a43 C: [276465]
        automated match to d3k2mc_
        complexed with dmu, f, na
      2. 2359583Domain d5a43d_: 5a43 D: [276467]
        automated match to d3k2mc_
        complexed with dmu, f, na
    38. Domain for 5dc0:
    39. Domain for 5dc4:
    40. Domain for 5dc9:
    41. Domains for 5dft:
      1. 2359566Domain d5dfta_: 5dft A: [322496]
        automated match to d1j8ka_
        complexed with cit
      2. 2359567Domain d5dftb_: 5dft B: [322498]
        automated match to d1j8ka_
        complexed with cit
      3. 2359568Domain d5dftc_: 5dft C: [322484]
        automated match to d1j8ka_
        complexed with cit
      4. 2359569Domain d5dftd_: 5dft D: [322456]
        automated match to d1j8ka_
        complexed with cit
      5. 2359570Domain d5dfte_: 5dft E: [322497]
        automated match to d1j8ka_
        complexed with cit
      6. 2359571Domain d5dftf_: 5dft F: [322503]
        automated match to d1j8ka_
        complexed with cit
      7. 2359572Domain d5dftg_: 5dft G: [322519]
        automated match to d1j8ka_
        complexed with cit
      8. 2359573Domain d5dfth_: 5dft H: [322491]
        automated match to d1j8ka_
        complexed with cit
      9. 2359574Domain d5dfti_: 5dft I: [322508]
        automated match to d1j8ka_
        complexed with cit
      10. 2359575Domain d5dftj_: 5dft J: [322458]
        automated match to d1j8ka_
        complexed with cit
    42. Domain for 5e95:
    43. Domains for 5ecj:
      1. 2359593Domain d5ecje_: 5ecj E: [279738]
        automated match to d3uyod_
      2. 2359594Domain d5ecjf_: 5ecj F: [279739]
        automated match to d3uyod_
    44. Domains for 5j7c:
      1. 2359564Domain d5j7cc1: 5j7c C:4-94 [321443]
        Other proteins in same PDB: d5j7ca_, d5j7cb_, d5j7cc2, d5j7cd2
        automated match to d5a41g_
      2. 2359565Domain d5j7cd1: 5j7c D:2-94 [321393]
        Other proteins in same PDB: d5j7ca_, d5j7cb_, d5j7cc2, d5j7cd2
        automated match to d5a41g_
    45. Domains for 5kbn:
      1. 2359562Domain d5kbnc_: 5kbn C: [320555]
        automated match to d5a43c_
        complexed with dmu, f, na; mutant
      2. 2359563Domain d5kbnd_: 5kbn D: [320480]
        automated match to d5a43c_
        complexed with dmu, f, na; mutant
    46. Domains for 5kom:
      1. 2359584Domain d5komc_: 5kom C: [320469]
        automated match to d5a43c_
        complexed with dmu, f, na; mutant
      2. 2359585Domain d5komd_: 5kom D: [320466]
        automated match to d5a43c_
        complexed with dmu, f, na; mutant
    47. Domain for 5mtj:
    48. Domains for 5nkq:
      1. 2359554Domain d5nkqe_: 5nkq E: [333441]
        automated match to d5a41g_
        complexed with f, na
      2. 2359555Domain d5nkqf_: 5nkq F: [333443]
        automated match to d5a41g_
        complexed with f, na
      3. 2359556Domain d5nkqg_: 5nkq G: [333524]
        automated match to d5a41g_
        complexed with f, na
      4. 2359557Domain d5nkqh_: 5nkq H: [333513]
        automated match to d5a41g_
        complexed with f, na
    49. Domains for 5u8r:
      1. 3047682Domain d5u8ra4: 5u8r A:458-578 [347744]
        Other proteins in same PDB: d5u8ra1, d5u8ra2, d5u8ra3, d5u8rh_, d5u8rl_
        automated match to d2dtge3
        complexed with imd, mlt, nag, so4
      2. 3047683Domain d5u8ra5: 5u8r A:798-897 [347745]
        Other proteins in same PDB: d5u8ra1, d5u8ra2, d5u8ra3, d5u8rh_, d5u8rl_
        automated match to d2dtge1
        complexed with imd, mlt, nag, so4
    50. Domains for 6b24:
      1. 2359586Domain d6b24c_: 6b24 C: [339978]
        automated match to d5a43c_
        complexed with dmu, f, na; mutant
      2. 2359587Domain d6b24d_: 6b24 D: [339979]
        automated match to d5a43c_
        complexed with dmu, f, na; mutant
    51. Domains for 6b2a:
      1. 2359578Domain d6b2ac_: 6b2a C: [339976]
        automated match to d5a43c_
        complexed with dmu, f, na; mutant
      2. 2359579Domain d6b2ad_: 6b2a D: [340014]
        automated match to d5a43c_
        complexed with dmu, f, na; mutant
    52. Domains for 6b2b:
      1. 2359576Domain d6b2bc_: 6b2b C: [339970]
        automated match to d5a43c_
        complexed with dmu, f, na; mutant
      2. 2359577Domain d6b2bd_: 6b2b D: [339971]
        automated match to d5a43c_
        complexed with dmu, f, na; mutant
    53. Domains for 6b2d:
      1. 2359590Domain d6b2dc_: 6b2d C: [340081]
        automated match to d5a43c_
        complexed with dmu, f, na; mutant
      2. 2359591Domain d6b2dd_: 6b2d D: [339961]
        automated match to d5a43c_
        complexed with dmu, f, na; mutant
    54. Domain for 6bqo:
    55. Domains for 6bx4:
      1. 3049813Domain d6bx4c_: 6bx4 C: [349875]
        automated match to d5kbnc_
        complexed with dmu, f, na
      2. 3049821Domain d6bx4d_: 6bx4 D: [349883]
        automated match to d5kbnc_
        complexed with dmu, f, na
    56. Domains for 6bx5:
      1. 3049759Domain d6bx5c_: 6bx5 C: [349821]
        automated match to d3uyod_
        complexed with f, na
      2. 3049774Domain d6bx5d_: 6bx5 D: [349836]
        automated match to d3uyod_
        complexed with f, na

More info for Protein automated matches from b.1.2.0: automated matches

Timeline for Protein automated matches from b.1.2.0: automated matches: