SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)
Fold f.4: Transmembrane beta-barrels [56924] (7 superfamilies)
not a true fold, gathers together transmembrane barrels of different (n,S)
annotated by the SCOP(e) curators as 'not a true fold'
Superfamily f.4.3: Porins [56935] (5 families)
Family f.4.3.4: Outer membrane protein transport protein [111361] (2 proteins)
Pfam PF03349; monomeric (14,16) barrel; plugged by an N-terminal all-alpha subdomain (1-40)
Protein automated matches [190968] (2 species)
not a true protein

Species:

Escherichia coli K-12 [TaxId:83333] [188699] (5 PDB entries)
1. Domains for 3dwn:
  1. Domain d3dwna_: 3dwn A: [174311]
    automated match to d1t16a_
    complexed with lda; mutant
  2. Domain d3dwnb_: 3dwn B: [174312]
    automated match to d1t16a_
    complexed with lda; mutant
2. Domains for 3pf1:
  1. Domain d3pf1a1: 3pf1 A:1-421 [183689]
    Other proteins in same PDB: d3pf1a2, d3pf1b2
    automated match to d1t16a_
    complexed with c8e, lda; mutant
  2. Domain d3pf1b1: 3pf1 B:1-421 [183690]
    Other proteins in same PDB: d3pf1a2, d3pf1b2
    automated match to d1t16a_
    complexed with c8e, lda; mutant
3. Domain for 3pgr:
  - Domain d3pgra1: 3pgr A:1-421 [183719]
    Other proteins in same PDB: d3pgra2
    automated match to d1t16a_
    complexed with c8e; mutant
4. Domains for 3pgs:
  1. Domain d3pgsa1: 3pgs A:1-421 [183720]
    Other proteins in same PDB: d3pgsa2, d3pgsb2
    automated match to d1t16a_
    complexed with 2pe, act, c8e, ca, lda; mutant
  2. Domain d3pgsb1: 3pgs B:1-421 [183721]
    Other proteins in same PDB: d3pgsa2, d3pgsb2
    automated match to d1t16a_
    complexed with 2pe, act, c8e, ca, lda; mutant
5. Domain for 3pgu:
  - Domain d3pgua1: 3pgu A:1-421 [183722]
    Other proteins in same PDB: d3pgua2
    automated match to d1t16a_
    complexed with 2pe, c8e, na, ni, ola; mutant
Escherichia coli [TaxId:562] [188604] (3 PDB entries)
1. Domains for 2r4p:
  1. Domain d2r4pa_: 2r4p A: [167973]
    automated match to d1t16a_
    complexed with lda; mutant
  2. Domain d2r4pb_: 2r4p B: [167974]
    automated match to d1t16a_
    complexed with lda; mutant
2. Domains for 2r88:
  1. Domain d2r88a_: 2r88 A: [168006]
    automated match to d1t16a_
    mutant
  2. Domain d2r88b_: 2r88 B: [168007]
    automated match to d1t16a_
    mutant
3. Domains for 2r8a:
  1. Domain d2r8aa_: 2r8a A: [243661]
    automated match to d2r88a_
    complexed with c8e; mutant
  2. Domain d2r8ab_: 2r8a B: [243662]
    automated match to d2r88a_
    complexed with c8e; mutant

More info for Protein automated matches from f.4.3.4: Outer membrane protein transport protein

Timeline for Protein automated matches from f.4.3.4: Outer membrane protein transport protein:

Protein automated matches from f.4.3.4: Outer membrane protein transport protein first appeared in SCOPe 2.01
Protein automated matches from f.4.3.4: Outer membrane protein transport protein appears in SCOPe 2.07