Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2921212Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 2921213Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 2921420Family c.116.1.0: automated matches [191557] (1 protein)
    not a true family
  6. 2921421Protein automated matches [190961] (22 species)
    not a true protein

Species:

  1. 2921422Acinetobacter baumannii [TaxId:470] [405655] (2 PDB entries)
    1. Domains for 7myq:
      1. 2921425Domain d7myqa1: 7myq A:2-244 [405656]
        Other proteins in same PDB: d7myqa2, d7myqb2
        automated match to d4mccb_
      2. 2921426Domain d7myqb1: 7myq B:2-245 [405669]
        Other proteins in same PDB: d7myqa2, d7myqb2
        automated match to d4mccb_
    2. Domains for 7mys:
      1. 2921423Domain d7mysa1: 7mys A:2-244 [405877]
        Other proteins in same PDB: d7mysa2, d7mysb2
        automated match to d4mccb_
        complexed with sah
      2. 2921424Domain d7mysb1: 7mys B:2-245 [405863]
        Other proteins in same PDB: d7mysa2, d7mysb2
        automated match to d4mccb_
        complexed with sah
  2. 2921427Anaplasma phagocytophilum [TaxId:212042] [232723] (2 PDB entries)
    1. Domains for 3knu:
      1. 2921429Domain d3knua1: 3knu A:1-211 [232724]
        Other proteins in same PDB: d3knua2, d3knub2, d3knuc2
        automated match to d3quva_
      2. 2921430Domain d3knub1: 3knu B:1-211 [232725]
        Other proteins in same PDB: d3knua2, d3knub2, d3knuc2
        automated match to d3quva_
      3. 2921431Domain d3knuc1: 3knu C:1-210 [232726]
        Other proteins in same PDB: d3knua2, d3knub2, d3knuc2
        automated match to d3quva_
      4. 2921432Domain d3knud_: 3knu D: [232727]
        Other proteins in same PDB: d3knua2, d3knub2, d3knuc2
        automated match to d3quva_
    2. Domain for 4ig6:
  3. 2921433Anaplasma phagocytophilum [TaxId:948] [375921] (1 PDB entry)
  4. 2921435Archaeoglobus fulgidus [TaxId:2234] [255990] (1 PDB entry)
  5. 2921437Bacillus anthracis [TaxId:261594] [257590] (1 PDB entry)
  6. 2921440Bartonella henselae [TaxId:38323] [225732] (1 PDB entry)
  7. 2921443Burkholderia phymatum [TaxId:391038] [256282] (2 PDB entries)
    1. Domains for 4h3y:
      1. 2921446Domain d4h3ya1: 4h3y A:1-254 [252374]
        Other proteins in same PDB: d4h3ya2, d4h3yb2
        automated match to d1uala_
        complexed with cl, sah
      2. 2921447Domain d4h3yb1: 4h3y B:1-254 [252375]
        Other proteins in same PDB: d4h3ya2, d4h3yb2
        automated match to d1uala_
        complexed with cl, sah
    2. Domains for 4h3z:
      1. 2921444Domain d4h3za1: 4h3z A:1-254 [252376]
        Other proteins in same PDB: d4h3za2, d4h3zb2
        automated match to d1uala_
        complexed with cl, sah
      2. 2921445Domain d4h3zb1: 4h3z B:1-254 [252377]
        Other proteins in same PDB: d4h3za2, d4h3zb2
        automated match to d1uala_
        complexed with cl, sah
  8. 2921448Burkholderia pseudomallei [TaxId:320372] [197042] (1 PDB entry)
  9. 2921451Burkholderia pseudomallei [TaxId:425067] [188581] (2 PDB entries)
    1. Domains for 3e5y:
      1. 2921458Domain d3e5ya_: 3e5y A: [174682]
        automated match to d1j85a_
      2. 2921459Domain d3e5yb_: 3e5y B: [174683]
        automated match to d1j85a_
    2. Domains for 4kgn:
      1. 2921452Domain d4kgnc1: 4kgn C:1-156 [202845]
        Other proteins in same PDB: d4kgnc2, d4kgnd2, d4kgnf2
        automated match to d3e5ya_
        complexed with cl, sah
      2. 2921453Domain d4kgnd1: 4kgn D:1-156 [202846]
        Other proteins in same PDB: d4kgnc2, d4kgnd2, d4kgnf2
        automated match to d3e5ya_
        complexed with cl, sah
      3. 2921454Domain d4kgne_: 4kgn E: [202847]
        Other proteins in same PDB: d4kgnc2, d4kgnd2, d4kgnf2
        automated match to d3e5ya_
        complexed with cl, sah
      4. 2921455Domain d4kgnf1: 4kgn F:1-156 [202848]
        Other proteins in same PDB: d4kgnc2, d4kgnd2, d4kgnf2
        automated match to d3e5ya_
        complexed with cl, sah
      5. 2921456Domain d4kgng_: 4kgn G: [202849]
        Other proteins in same PDB: d4kgnc2, d4kgnd2, d4kgnf2
        automated match to d3e5ya_
        complexed with cl, sah
      6. 2921457Domain d4kgnh_: 4kgn H: [202850]
        Other proteins in same PDB: d4kgnc2, d4kgnd2, d4kgnf2
        automated match to d3e5ya_
        complexed with cl, sah
  10. 2921460Escherichia coli K-12 [TaxId:83333] [234948] (2 PDB entries)
    1. Domains for 4jak:
      1. 2921461Domain d4jaka1: 4jak A:2-154 [234949]
        Other proteins in same PDB: d4jaka2, d4jakb2
        automated match to d4kgnd_
      2. 2921462Domain d4jakb1: 4jak B:2-154 [234950]
        Other proteins in same PDB: d4jaka2, d4jakb2
        automated match to d4kgnd_
    2. Domains for 4jal:
      1. 2921463Domain d4jala1: 4jal A:2-155 [237816]
        Other proteins in same PDB: d4jala2, d4jalb2
        automated match to d4jaka_
        complexed with edo, epe, sah
      2. 2921464Domain d4jalb1: 4jal B:2-154 [237817]
        Other proteins in same PDB: d4jala2, d4jalb2
        automated match to d4jaka_
        complexed with edo, epe, sah
  11. 2921465Human (Homo sapiens) [TaxId:9606] [314023] (1 PDB entry)
  12. 2921467Legionella pneumophila [TaxId:446] [341250] (2 PDB entries)
    1. Domains for 5o95:
      1. 2921468Domain d5o95a2: 5o95 A:76-244 [341256]
        Other proteins in same PDB: d5o95a1, d5o95b1, d5o95b3, d5o95c1, d5o95c3, d5o95d1
        automated match to d4e8ba2
      2. 2921469Domain d5o95b2: 5o95 B:76-244 [341283]
        Other proteins in same PDB: d5o95a1, d5o95b1, d5o95b3, d5o95c1, d5o95c3, d5o95d1
        automated match to d4e8ba2
      3. 2921470Domain d5o95c2: 5o95 C:76-244 [341286]
        Other proteins in same PDB: d5o95a1, d5o95b1, d5o95b3, d5o95c1, d5o95c3, d5o95d1
        automated match to d4e8ba2
      4. 2921471Domain d5o95d2: 5o95 D:76-244 [341251]
        Other proteins in same PDB: d5o95a1, d5o95b1, d5o95b3, d5o95c1, d5o95c3, d5o95d1
        automated match to d4e8ba2
    2. Domains for 5o96:
      1. 2921472Domain d5o96a2: 5o96 A:76-244 [341269]
        Other proteins in same PDB: d5o96a1, d5o96b1, d5o96c1, d5o96d1, d5o96e1, d5o96f1, d5o96g1, d5o96h1
        automated match to d4e8ba2
        protein/RNA complex; complexed with sam
      2. 2921473Domain d5o96b2: 5o96 B:76-244 [341265]
        Other proteins in same PDB: d5o96a1, d5o96b1, d5o96c1, d5o96d1, d5o96e1, d5o96f1, d5o96g1, d5o96h1
        automated match to d4e8ba2
        protein/RNA complex; complexed with sam
      3. 2921474Domain d5o96c2: 5o96 C:76-244 [341333]
        Other proteins in same PDB: d5o96a1, d5o96b1, d5o96c1, d5o96d1, d5o96e1, d5o96f1, d5o96g1, d5o96h1
        automated match to d4e8ba2
        protein/RNA complex; complexed with sam
      4. 2921475Domain d5o96d2: 5o96 D:76-244 [341331]
        Other proteins in same PDB: d5o96a1, d5o96b1, d5o96c1, d5o96d1, d5o96e1, d5o96f1, d5o96g1, d5o96h1
        automated match to d4e8ba2
        protein/RNA complex; complexed with sam
      5. 2921476Domain d5o96e2: 5o96 E:76-244 [341254]
        Other proteins in same PDB: d5o96a1, d5o96b1, d5o96c1, d5o96d1, d5o96e1, d5o96f1, d5o96g1, d5o96h1
        automated match to d4e8ba2
        protein/RNA complex; complexed with sam
      6. 2921477Domain d5o96f2: 5o96 F:76-244 [341262]
        Other proteins in same PDB: d5o96a1, d5o96b1, d5o96c1, d5o96d1, d5o96e1, d5o96f1, d5o96g1, d5o96h1
        automated match to d4e8ba2
        protein/RNA complex; complexed with sam
      7. 2921478Domain d5o96g2: 5o96 G:76-244 [341404]
        Other proteins in same PDB: d5o96a1, d5o96b1, d5o96c1, d5o96d1, d5o96e1, d5o96f1, d5o96g1, d5o96h1
        automated match to d4e8ba2
        protein/RNA complex; complexed with sam
      8. 2921479Domain d5o96h2: 5o96 H:76-244 [341267]
        Other proteins in same PDB: d5o96a1, d5o96b1, d5o96c1, d5o96d1, d5o96e1, d5o96f1, d5o96g1, d5o96h1
        automated match to d4e8ba2
        protein/RNA complex; complexed with sam
  13. 2921480Methanocaldococcus jannaschii [TaxId:2190] [189685] (2 PDB entries)
    1. Domain for 3ai9:
    2. Domains for 3aia:
      1. 2921481Domain d3aiaa1: 3aia A:2-200 [172204]
        Other proteins in same PDB: d3aiaa2, d3aiab2
        automated match to d2qmma1
        complexed with pbl, sam
      2. 2921482Domain d3aiab1: 3aia B:2-200 [172205]
        Other proteins in same PDB: d3aiaa2, d3aiab2
        automated match to d2qmma1
        complexed with pbl, sam
  14. 2921484Mycobacterium abscessus [TaxId:36809] [374339] (56 PDB entries)
    1. Domains for 6nw6:
      1. 2921501Domain d6nw6a1: 6nw6 A:1-227 [380735]
        Other proteins in same PDB: d6nw6a2, d6nw6b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with sam, so4
      2. 2921502Domain d6nw6b1: 6nw6 B:1-231 [380731]
        Other proteins in same PDB: d6nw6a2, d6nw6b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with sam, so4
    2. Domains for 6nw7:
      1. 2921485Domain d6nw7a1: 6nw7 A:1-227 [380818]
        Other proteins in same PDB: d6nw7a2, d6nw7b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with sah, so4
      2. 2921486Domain d6nw7b1: 6nw7 B:1-233 [380856]
        Other proteins in same PDB: d6nw7a2, d6nw7b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with sah, so4
    3. Domains for 6qo2:
      1. 2921513Domain d6qo2a1: 6qo2 A:1-228 [381863]
        Other proteins in same PDB: d6qo2a2, d6qo2b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jaw
      2. 2921514Domain d6qo2b1: 6qo2 B:1-231 [381824]
        Other proteins in same PDB: d6qo2a2, d6qo2b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jaw
    4. Domains for 6qo3:
      1. 2921503Domain d6qo3a1: 6qo3 A:1-227 [381888]
        Other proteins in same PDB: d6qo3a2, d6qo3b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with j9n
      2. 2921504Domain d6qo3b1: 6qo3 B:1-231 [381794]
        Other proteins in same PDB: d6qo3a2, d6qo3b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with j9n
    5. Domains for 6qo4:
      1. 2921529Domain d6qo4a_: 6qo4 A: [381859]
        Other proteins in same PDB: d6qo4b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with 97t
      2. 2921530Domain d6qo4b1: 6qo4 B:1-231 [381798]
        Other proteins in same PDB: d6qo4b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with 97t
    6. Domains for 6qo6:
      1. 2921521Domain d6qo6a1: 6qo6 A:1-228 [381861]
        Other proteins in same PDB: d6qo6a2, d6qo6b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with 5ob
      2. 2921522Domain d6qo6b1: 6qo6 B:1-231 [381836]
        Other proteins in same PDB: d6qo6a2, d6qo6b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with 5ob
    7. Domains for 6qoa:
      1. 2921567Domain d6qoaa1: 6qoa A:1-228 [381782]
        Other proteins in same PDB: d6qoaa2, d6qoab2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jbn
      2. 2921568Domain d6qoab1: 6qoa B:1-231 [381869]
        Other proteins in same PDB: d6qoaa2, d6qoab2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jbn
    8. Domains for 6qoc:
      1. 2921541Domain d6qoca1: 6qoc A:1-228 [381911]
        Other proteins in same PDB: d6qoca2, d6qocb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with j9q
      2. 2921542Domain d6qocb1: 6qoc B:1-231 [381867]
        Other proteins in same PDB: d6qoca2, d6qocb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with j9q
    9. Domains for 6qod:
      1. 2921545Domain d6qoda1: 6qod A:1-228 [381827]
        Other proteins in same PDB: d6qoda2, d6qodb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with fbb
      2. 2921546Domain d6qodb1: 6qod B:1-231 [381904]
        Other proteins in same PDB: d6qoda2, d6qodb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with fbb
    10. Domains for 6qoe:
      1. 2921595Domain d6qoea1: 6qoe A:1-227 [381886]
        Other proteins in same PDB: d6qoea2, d6qoeb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jbb
      2. 2921596Domain d6qoeb1: 6qoe B:1-232 [381873]
        Other proteins in same PDB: d6qoea2, d6qoeb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jbb
    11. Domains for 6qof:
      1. 2921525Domain d6qofa1: 6qof A:1-229 [381520]
        Other proteins in same PDB: d6qofa2, d6qofb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with ade, edo
      2. 2921526Domain d6qofb1: 6qof B:1-231 [381421]
        Other proteins in same PDB: d6qofa2, d6qofb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with ade, edo
    12. Domains for 6qog:
      1. 2921497Domain d6qoga1: 6qog A:1-231 [381436]
        Other proteins in same PDB: d6qoga2, d6qogb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with ja8
      2. 2921498Domain d6qogb1: 6qog B:1-227 [381394]
        Other proteins in same PDB: d6qoga2, d6qogb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with ja8
    13. Domains for 6qoh:
      1. 2921507Domain d6qoha1: 6qoh A:1-228 [381486]
        Other proteins in same PDB: d6qoha2, d6qohb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with 6gu, so4
      2. 2921508Domain d6qohb1: 6qoh B:1-231 [381480]
        Other proteins in same PDB: d6qoha2, d6qohb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with 6gu, so4
    14. Domains for 6qoi:
      1. 2921547Domain d6qoia_: 6qoi A: [381482]
        Other proteins in same PDB: d6qoib2
        automated match to d1oy5a_
        protein/RNA complex; complexed with abv
      2. 2921548Domain d6qoib1: 6qoi B:1-231 [381471]
        Other proteins in same PDB: d6qoib2
        automated match to d1oy5a_
        protein/RNA complex; complexed with abv
    15. Domains for 6qoj:
      1. 2921577Domain d6qoja1: 6qoj A:1-231 [391230]
        Other proteins in same PDB: d6qoja2, d6qojb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jbh
      2. 2921578Domain d6qojb1: 6qoj B:1-228 [391232]
        Other proteins in same PDB: d6qoja2, d6qojb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jbh
    16. Domains for 6qok:
      1. 2921487Domain d6qoka1: 6qok A:1-227 [381442]
        Other proteins in same PDB: d6qoka2, d6qokb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with j9t, so4
      2. 2921488Domain d6qokb1: 6qok B:1-231 [381478]
        Other proteins in same PDB: d6qoka2, d6qokb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with j9t, so4
    17. Domains for 6qol:
      1. 2921549Domain d6qola1: 6qol A:1-227 [381404]
        Other proteins in same PDB: d6qola2, d6qolb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jb5
      2. 2921550Domain d6qolb1: 6qol B:1-231 [381406]
        Other proteins in same PDB: d6qola2, d6qolb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jb5
    18. Domains for 6qom:
      1. 2921551Domain d6qoma1: 6qom A:1-228 [381438]
        Other proteins in same PDB: d6qoma2, d6qomb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jbe
      2. 2921552Domain d6qomb1: 6qom B:1-232 [381568]
        Other proteins in same PDB: d6qoma2, d6qomb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jbe
    19. Domains for 6qon:
      1. 2921533Domain d6qona1: 6qon A:1-227 [381432]
        Other proteins in same PDB: d6qona2, d6qonb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with j9w, so4
      2. 2921534Domain d6qonb1: 6qon B:1-231 [381397]
        Other proteins in same PDB: d6qona2, d6qonb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with j9w, so4
    20. Domains for 6qoo:
      1. 2921559Domain d6qooa1: 6qoo A:1-227 [381453]
        Other proteins in same PDB: d6qooa2, d6qoob2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jab, so4
      2. 2921560Domain d6qoob1: 6qoo B:1-231 [381414]
        Other proteins in same PDB: d6qooa2, d6qoob2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jab, so4
    21. Domains for 6qop:
      1. 2921553Domain d6qopa1: 6qop A:1-227 [381398]
        Other proteins in same PDB: d6qopa2, d6qopb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jbq, so4
      2. 2921554Domain d6qopb1: 6qop B:1-231 [381430]
        Other proteins in same PDB: d6qopa2, d6qopb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jbq, so4
    22. Domains for 6qoq:
      1. 2921511Domain d6qoqa1: 6qoq A:1-227 [381433]
        Other proteins in same PDB: d6qoqa2, d6qoqb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jae
      2. 2921512Domain d6qoqb1: 6qoq B:1-231 [381387]
        Other proteins in same PDB: d6qoqa2, d6qoqb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jae
    23. Domains for 6qor:
      1. 2921509Domain d6qora1: 6qor A:1-227 [381424]
        Other proteins in same PDB: d6qora2, d6qorb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jbk, so4
      2. 2921510Domain d6qorb1: 6qor B:1-232 [381440]
        Other proteins in same PDB: d6qora2, d6qorb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jbk, so4
    24. Domains for 6qos:
      1. 2921573Domain d6qosa1: 6qos A:1-227 [381391]
        Other proteins in same PDB: d6qosa2, d6qosb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with goj, so4
      2. 2921574Domain d6qosb1: 6qos B:1-232 [381460]
        Other proteins in same PDB: d6qosa2, d6qosb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with goj, so4
    25. Domains for 6qot:
      1. 2921499Domain d6qota1: 6qot A:1-227 [381468]
        Other proteins in same PDB: d6qota2, d6qotb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with 6sd, edo
      2. 2921500Domain d6qotb1: 6qot B:1-231 [381451]
        Other proteins in same PDB: d6qota2, d6qotb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with 6sd, edo
    26. Domains for 6qou:
      1. 2921495Domain d6qoua1: 6qou A:1-227 [381449]
        Other proteins in same PDB: d6qoua2, d6qoub2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jb8
      2. 2921496Domain d6qoub1: 6qou B:1-231 [381373]
        Other proteins in same PDB: d6qoua2, d6qoub2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jb8
    27. Domains for 6qov:
      1. 2921493Domain d6qova1: 6qov A:1-227 [381499]
        Other proteins in same PDB: d6qova2, d6qovb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jah
      2. 2921494Domain d6qovb1: 6qov B:1-231 [381541]
        Other proteins in same PDB: d6qova2, d6qovb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jah
    28. Domains for 6qow:
      1. 2921491Domain d6qowa1: 6qow A:1-227 [381427]
        Other proteins in same PDB: d6qowa2, d6qowb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jbz, so4
      2. 2921492Domain d6qowb1: 6qow B:1-233 [381466]
        Other proteins in same PDB: d6qowa2, d6qowb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jbz, so4
    29. Domains for 6qox:
      1. 2921515Domain d6qoxa1: 6qox A:1-227 [381455]
        Other proteins in same PDB: d6qoxa2, d6qoxb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with ja5
      2. 2921516Domain d6qoxb1: 6qox B:1-231 [381476]
        Other proteins in same PDB: d6qoxa2, d6qoxb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with ja5
    30. Domains for 6qqq:
      1. 2921581Domain d6qqqa1: 6qqq A:1-227 [374340]
        Other proteins in same PDB: d6qqqa2, d6qqqb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jde, so4
      2. 2921582Domain d6qqqb1: 6qqq B:1-232 [374367]
        Other proteins in same PDB: d6qqqa2, d6qqqb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jde, so4
    31. Domains for 6qqr:
      1. 2921531Domain d6qqra1: 6qqr A:1-227 [374361]
        Other proteins in same PDB: d6qqra2, d6qqrb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jdn
      2. 2921532Domain d6qqrb1: 6qqr B:1-231 [374391]
        Other proteins in same PDB: d6qqra2, d6qqrb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jdn
    32. Domains for 6qqs:
      1. 2921523Domain d6qqsa1: 6qqs A:1-227 [382338]
        Other proteins in same PDB: d6qqsa2, d6qqsb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jcz
      2. 2921524Domain d6qqsb1: 6qqs B:1-232 [382517]
        Other proteins in same PDB: d6qqsa2, d6qqsb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jcz
    33. Domains for 6qqt:
      1. 2921557Domain d6qqta1: 6qqt A:1-227 [374389]
        Other proteins in same PDB: d6qqta2, d6qqtb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jch, so4
      2. 2921558Domain d6qqtb1: 6qqt B:1-232 [374453]
        Other proteins in same PDB: d6qqta2, d6qqtb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jch, so4
    34. Domains for 6qqu:
      1. 2921539Domain d6qqua1: 6qqu A:1-227 [374468]
        Other proteins in same PDB: d6qqua2, d6qqub2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jf8
      2. 2921540Domain d6qqub1: 6qqu B:1-232 [374440]
        Other proteins in same PDB: d6qqua2, d6qqub2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jf8
    35. Domains for 6qqv:
      1. 2921563Domain d6qqva1: 6qqv A:1-227 [374356]
        Other proteins in same PDB: d6qqva2, d6qqvb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jew, so4
      2. 2921564Domain d6qqvb1: 6qqv B:1-232 [374373]
        Other proteins in same PDB: d6qqva2, d6qqvb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jew, so4
    36. Domains for 6qqw:
      1. 2921575Domain d6qqwa1: 6qqw A:1-227 [374466]
        Other proteins in same PDB: d6qqwa2, d6qqwb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jdq, so4
      2. 2921576Domain d6qqwb1: 6qqw B:1-232 [374473]
        Other proteins in same PDB: d6qqwa2, d6qqwb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jdq, so4
    37. Domains for 6qqx:
      1. 2921591Domain d6qqxa1: 6qqx A:1-227 [382353]
        Other proteins in same PDB: d6qqxa2, d6qqxb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jce, so4
      2. 2921592Domain d6qqxb1: 6qqx B:1-232 [382345]
        Other proteins in same PDB: d6qqxa2, d6qqxb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jce, so4
    38. Domains for 6qqy:
      1. 2921489Domain d6qqya1: 6qqy A:1-227 [382348]
        Other proteins in same PDB: d6qqya2, d6qqyb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jd2
      2. 2921490Domain d6qqyb1: 6qqy B:1-232 [382365]
        Other proteins in same PDB: d6qqya2, d6qqyb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jd2
    39. Domains for 6qqz:
      1. 2921561Domain d6qqza1: 6qqz A:1-227 [374409]
        Other proteins in same PDB: d6qqza2, d6qqzb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jeb, so4
      2. 2921562Domain d6qqzb1: 6qqz B:1-232 [374348]
        Other proteins in same PDB: d6qqza2, d6qqzb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jeb, so4
    40. Domains for 6qr0:
      1. 2921537Domain d6qr0a1: 6qr0 A:1-227 [374365]
        Other proteins in same PDB: d6qr0a2, d6qr0b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jfb, so4
      2. 2921538Domain d6qr0b1: 6qr0 B:1-233 [374407]
        Other proteins in same PDB: d6qr0a2, d6qr0b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jfb, so4
    41. Domains for 6qr1:
      1. 2921555Domain d6qr1a1: 6qr1 A:1-227 [374411]
        Other proteins in same PDB: d6qr1a2, d6qr1b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jft
      2. 2921556Domain d6qr1b1: 6qr1 B:1-232 [374449]
        Other proteins in same PDB: d6qr1a2, d6qr1b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jft
    42. Domains for 6qr2:
      1. 2921527Domain d6qr2a1: 6qr2 A:1-227 [374429]
        Other proteins in same PDB: d6qr2a2, d6qr2b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jqb, so4
      2. 2921528Domain d6qr2b1: 6qr2 B:1-232 [374396]
        Other proteins in same PDB: d6qr2a2, d6qr2b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jqb, so4
    43. Domains for 6qr3:
      1. 2921543Domain d6qr3a1: 6qr3 A:1-227 [374363]
        Other proteins in same PDB: d6qr3a2, d6qr3b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with je8, so4
      2. 2921544Domain d6qr3b1: 6qr3 B:1-232 [374399]
        Other proteins in same PDB: d6qr3a2, d6qr3b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with je8, so4
    44. Domains for 6qr4:
      1. 2921519Domain d6qr4a1: 6qr4 A:1-227 [374419]
        Other proteins in same PDB: d6qr4a2, d6qr4b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jd8
      2. 2921520Domain d6qr4b1: 6qr4 B:1-232 [374383]
        Other proteins in same PDB: d6qr4a2, d6qr4b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jd8
    45. Domains for 6qr5:
      1. 2921535Domain d6qr5a1: 6qr5 A:1-227 [382376]
        Other proteins in same PDB: d6qr5a2, d6qr5b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jfh
      2. 2921536Domain d6qr5b1: 6qr5 B:1-232 [382450]
        Other proteins in same PDB: d6qr5a2, d6qr5b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jfh
    46. Domains for 6qr6:
      1. 2921517Domain d6qr6a1: 6qr6 A:1-227 [382389]
        Other proteins in same PDB: d6qr6a2, d6qr6b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jck, so4
      2. 2921518Domain d6qr6b1: 6qr6 B:1-232 [382382]
        Other proteins in same PDB: d6qr6a2, d6qr6b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jck, so4
    47. Domains for 6qr7:
      1. 2921589Domain d6qr7a1: 6qr7 A:1-227 [374464]
        Other proteins in same PDB: d6qr7a2, d6qr7b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jek
      2. 2921590Domain d6qr7b1: 6qr7 B:1-231 [374377]
        Other proteins in same PDB: d6qr7a2, d6qr7b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jek
    48. Domains for 6qr8:
      1. 2921585Domain d6qr8a1: 6qr8 A:1-227 [382417]
        Other proteins in same PDB: d6qr8a2, d6qr8b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jdh
      2. 2921586Domain d6qr8b1: 6qr8 B:1-231 [382423]
        Other proteins in same PDB: d6qr8a2, d6qr8b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jdh
    49. Domains for 6qr9:
      1. 2921593Domain d6qr9a1: 6qr9 A:1-227 [374417]
        Other proteins in same PDB: d6qr9a2, d6qr9b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jee
      2. 2921594Domain d6qr9b1: 6qr9 B:1-231 [374374]
        Other proteins in same PDB: d6qr9a2, d6qr9b2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jee
    50. Domains for 6qra:
      1. 2921565Domain d6qraa1: 6qra A:1-227 [374371]
        Other proteins in same PDB: d6qraa2, d6qrab2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jdk, so4
      2. 2921566Domain d6qrab1: 6qra B:1-232 [374379]
        Other proteins in same PDB: d6qraa2, d6qrab2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jdk, so4
    51. Domains for 6qrb:
      1. 2921505Domain d6qrba1: 6qrb A:1-227 [382404]
        Other proteins in same PDB: d6qrba2, d6qrbb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jeq
      2. 2921506Domain d6qrbb1: 6qrb B:1-232 [382351]
        Other proteins in same PDB: d6qrba2, d6qrbb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jeq
    52. Domains for 6qrc:
      1. 2921569Domain d6qrca1: 6qrc A:1-227 [374445]
        Other proteins in same PDB: d6qrca2, d6qrcb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jfe, so4
      2. 2921570Domain d6qrcb1: 6qrc B:1-233 [374394]
        Other proteins in same PDB: d6qrca2, d6qrcb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jfe, so4
    53. Domains for 6qrd:
      1. 2921571Domain d6qrda1: 6qrd A:1-227 [374415]
        Other proteins in same PDB: d6qrda2, d6qrdb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jeh, so4
      2. 2921572Domain d6qrdb1: 6qrd B:1-232 [374451]
        Other proteins in same PDB: d6qrda2, d6qrdb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jeh, so4
    54. Domains for 6qre:
      1. 2921587Domain d6qrea1: 6qre A:1-227 [374413]
        Other proteins in same PDB: d6qrea2, d6qreb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jcq
      2. 2921588Domain d6qreb1: 6qre B:1-232 [374401]
        Other proteins in same PDB: d6qrea2, d6qreb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jcq
    55. Domains for 6qrf:
      1. 2921583Domain d6qrfa1: 6qrf A:1-227 [374403]
        Other proteins in same PDB: d6qrfa2, d6qrfb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jf5, so4
      2. 2921584Domain d6qrfb1: 6qrf B:1-232 [374475]
        Other proteins in same PDB: d6qrfa2, d6qrfb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jf5, so4
    56. Domains for 6qrg:
      1. 2921579Domain d6qrga1: 6qrg A:1-227 [374501]
        Other proteins in same PDB: d6qrga2, d6qrgb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jet, so4
      2. 2921580Domain d6qrgb1: 6qrg B:1-232 [374359]
        Other proteins in same PDB: d6qrga2, d6qrgb2
        automated match to d1oy5a_
        protein/RNA complex; complexed with jet, so4
  15. 2921597Mycobacterium abscessus [TaxId:561007] [226092] (1 PDB entry)
  16. 2921600Mycobacteroides abscessus [TaxId:36809] [380800] (1 PDB entry)
  17. 2921603Mycolicibacterium smegmatis [TaxId:246196] [385199] (2 PDB entries)
    1. Domain for 6w14:
    2. Domain for 6w15:
  18. 2921606Pseudomonas aeruginosa [TaxId:287] [389295] (1 PDB entry)
  19. 2921611Pyrococcus horikoshii [TaxId:53953] [255719] (1 PDB entry)
  20. 2921614Staphylococcus aureus [TaxId:282458] [189168] (1 PDB entry)
  21. 2921616Streptococcus mutans [TaxId:210007] [189590] (1 PDB entry)
  22. 2921619Thermus thermophilus [TaxId:262724] [319700] (1 PDB entry)

More info for Protein automated matches from c.116.1.0: automated matches

Timeline for Protein automated matches from c.116.1.0: automated matches: