Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1624120Fold c.92: Chelatase-like [53799] (3 superfamilies)
    duplication: tandem repeat of two domains; 3 layers (a/b/a); parallel beta-sheet of 4 strands, order 2134
  4. 1624224Superfamily c.92.2: "Helical backbone" metal receptor [53807] (5 families) (S)
    contains a long alpha helical insertion in the interdomain linker
  5. 1624417Family c.92.2.0: automated matches [191548] (1 protein)
    not a true family
  6. 1624418Protein automated matches [190944] (23 species)
    not a true protein

Species:

  1. 1624419Azotobacter vinelandii [TaxId:322710] [256020] (1 PDB entry)
  2. 1624424Bacillus cereus [TaxId:1396] [233693] (1 PDB entry)
  3. 1624426Bacillus subtilis [TaxId:1423] [193874] (1 PDB entry)
  4. 1624429Bacillus subtilis [TaxId:224308] [232282] (2 PDB entries)
    1. Domain for 3g9q:
    2. Domains for 3gfv:
      1. 1624430Domain d3gfva_: 3gfv A: [232283]
        automated match to d3tefa_
        complexed with asn, po4
      2. 1624431Domain d3gfvb_: 3gfv B: [239320]
        automated match to d3gfva_
        complexed with asn, po4
  5. 1624433Escherichia coli [TaxId:562] [193890] (6 PDB entries)
    1. Domains for 2ogw:
      1. 1624438Domain d2ogwa_: 2ogw A: [205270]
        automated match to d2xqva_
        complexed with zn
      2. 1624439Domain d2ogwb_: 2ogw B: [205271]
        automated match to d2xqva_
        complexed with zn
    2. Domains for 2osv:
      1. 1624434Domain d2osva_: 2osv A: [198224]
        automated match to d2osvb_
        complexed with zn
      2. 1624435Domain d2osvb_: 2osv B: [193891]
        automated match to d2xy4a_
        complexed with zn
    3. Domains for 2prs:
      1. 1624436Domain d2prsa_: 2prs A: [205600]
        automated match to d2osvb_
        complexed with ipa, zn
      2. 1624437Domain d2prsb_: 2prs B: [205601]
        automated match to d2osvb_
        complexed with ipa, zn
    4. Domains for 2ps0:
      1. 1624440Domain d2ps0a_: 2ps0 A: [205602]
        automated match to d2osvb_
        complexed with zn
      2. 1624441Domain d2ps0b_: 2ps0 B: [205603]
        automated match to d2osvb_
        complexed with zn
    5. Domains for 2ps3:
      1. 1624444Domain d2ps3a_: 2ps3 A: [205612]
        automated match to d2osvb_
      2. 1624445Domain d2ps3b_: 2ps3 B: [205613]
        automated match to d2osvb_
    6. Domains for 2ps9:
      1. 1624442Domain d2ps9a_: 2ps9 A: [205624]
        automated match to d2osvb_
        complexed with co
      2. 1624443Domain d2ps9b_: 2ps9 B: [205625]
        automated match to d2osvb_
        complexed with co
  6. 1624446Escherichia coli [TaxId:83333] [256409] (1 PDB entry)
  7. 1624448Salmonella enterica [TaxId:28901] [228286] (1 PDB entry)
  8. 1624450Salmonella enterica [TaxId:90371] [226119] (1 PDB entry)
  9. 1624452Salmonella typhimurium [TaxId:90371] [189939] (2 PDB entries)
    1. Domain for 2xqv:
    2. Domain for 2xy4:
  10. 1624455Staphylococcus aureus [TaxId:158878] [261218] (2 PDB entries)
    1. Domain for 4nno:
    2. Domains for 4nnp:
      1. 1624457Domain d4nnpa_: 4nnp A: [261510]
        Other proteins in same PDB: d4nnpl1, d4nnpl2, d4nnpy1, d4nnpy2
        automated match to d4k3va_
      2. 1624458Domain d4nnpb_: 4nnp B: [261511]
        Other proteins in same PDB: d4nnpl1, d4nnpl2, d4nnpy1, d4nnpy2
        automated match to d4k3va_
  11. 1624459Staphylococcus aureus [TaxId:158879] [225672] (3 PDB entries)
    1. Domain for 3eiw:
    2. Domain for 3eix:
    3. Domain for 3mwf:
  12. 1624463Staphylococcus aureus [TaxId:426430] [225834] (2 PDB entries)
    1. Domain for 3lhs:
    2. Domains for 3li2:
      1. 1624465Domain d3li2a_: 3li2 A: [212895]
        automated match to d3tefa_
        complexed with act, fe, sf8, zn
      2. 1624466Domain d3li2b_: 3li2 B: [212896]
        automated match to d3tefa_
        complexed with act, fe, sf8, zn
  13. 1624467Staphylococcus aureus [TaxId:869816] [235084] (1 PDB entry)
  14. 1624470Staphylococcus epidermidis [TaxId:176280] [256363] (1 PDB entry)
  15. 1624472Staphylococcus pseudintermedius [TaxId:283734] [260726] (1 PDB entry)
  16. 1624474Streptococcus agalactiae [TaxId:1311] [196503] (1 PDB entry)
  17. 1624477Streptococcus agalactiae [TaxId:208435] [227693] (1 PDB entry)
  18. 1624480Streptococcus pneumoniae [TaxId:171101] [188513] (1 PDB entry)
  19. 1624483Streptococcus pneumoniae [TaxId:637987] [234961] (1 PDB entry)
  20. 1624485Streptococcus pyogenes [TaxId:1314] [196552] (1 PDB entry)
  21. 1624488Streptococcus suis [TaxId:391295] [189905] (1 PDB entry)
  22. 1624492Synechocystis sp. [TaxId:1148] [226531] (1 PDB entry)
  23. 1624496Vibrio cholerae [TaxId:666] [193580] (1 PDB entry)

More info for Protein automated matches from c.92.2.0: automated matches

Timeline for Protein automated matches from c.92.2.0: automated matches: