Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3007687Fold d.224: SufE/NifU [82648] (1 superfamily)
    alpha(2)-beta(3)-alpha(3); 2 layers alpha/beta, 3-stranded antiparallel beta-sheet; order 123
  4. 3007688Superfamily d.224.1: SufE/NifU [82649] (4 families) (S)
    iron-sulfur cluster assembly proteins
  5. 3007772Family d.224.1.0: automated matches [191547] (1 protein)
    not a true family
  6. 3007773Protein automated matches [190942] (7 species)
    not a true protein

Species:

  1. 3007774Aquifex aeolicus [TaxId:63363] [225504] (1 PDB entry)
  2. 3007778Archaeoglobus fulgidus [TaxId:224325] [226363] (2 PDB entries)
    1. Domains for 4eb5:
      1. 3007779Domain d4eb5c_: 4eb5 C: [220401]
        Other proteins in same PDB: d4eb5a_, d4eb5b_
        automated match to d1r9pa_
        complexed with epe, fes, gol, plp
      2. 3007780Domain d4eb5d_: 4eb5 D: [220402]
        Other proteins in same PDB: d4eb5a_, d4eb5b_
        automated match to d1r9pa_
        complexed with epe, fes, gol, plp
    2. Domain for 4eb7:
  3. 3007782Brucella abortus [TaxId:359391] [329148] (1 PDB entry)
  4. 3007784Enterococcus faecalis [TaxId:226185] [330981] (5 PDB entries)
    1. Domain for 5iby:
    2. Domains for 5ich:
      1. 3007789Domain d5icha2: 5ich A:248-334 [330982]
        Other proteins in same PDB: d5icha1, d5icha3, d5ichb1, d5ichb3
        automated match to d1vqza1
        complexed with sh5
      2. 3007790Domain d5ichb2: 5ich B:248-334 [331405]
        Other proteins in same PDB: d5icha1, d5icha3, d5ichb1, d5ichb3
        automated match to d1vqza1
        complexed with sh5
    3. Domains for 5icl:
      1. 3007786Domain d5icla2: 5icl A:248-334 [331054]
        Other proteins in same PDB: d5icla1, d5icla3, d5iclb1, d5iclb3
        automated match to d1vqza1
        complexed with laq
      2. 3007787Domain d5iclb2: 5icl B:248-334 [331249]
        Other proteins in same PDB: d5icla1, d5icla3, d5iclb1, d5iclb3
        automated match to d1vqza1
        complexed with laq
    4. Domain for 5idh:
    5. Domain for 5ij6:
  5. 3007792Fervidobacterium islandicum [TaxId:2423] [375276] (2 PDB entries)
    1. Domains for 6a6f:
      1. 3007793Domain d6a6fa1: 6a6f A:1-133 [375278]
        Other proteins in same PDB: d6a6fa2, d6a6fb2
        automated match to d1xjsa_
        complexed with gol, ni, peg, zn
      2. 3007794Domain d6a6fb1: 6a6f B:1-133 [375277]
        Other proteins in same PDB: d6a6fa2, d6a6fb2
        automated match to d1xjsa_
        complexed with gol, ni, peg, zn
    2. Domains for 6a6g:
      1. 3007795Domain d6a6gc1: 6a6g C:1-133 [375395]
        Other proteins in same PDB: d6a6ga_, d6a6gb1, d6a6gb2, d6a6gc2
        automated match to d1xjsa_
        complexed with gol, peg, plp, zn
      2. 3007796Domain d6a6gd_: 6a6g D: [375412]
        Other proteins in same PDB: d6a6ga_, d6a6gb1, d6a6gb2, d6a6gc2
        automated match to d1xjsa_
        complexed with gol, peg, plp, zn
  6. 3007797Methanothrix thermoacetophila [TaxId:2224] [404561] (3 PDB entries)
    1. Domain for 7c8n:
    2. Domains for 7c8o:
      1. 3007799Domain d7c8oa_: 7c8o A: [404563]
        automated match to d2z7ec_
        complexed with fes
      2. 3007800Domain d7c8ob_: 7c8o B: [404564]
        automated match to d2z7ec_
        complexed with fes
      3. 3007801Domain d7c8oc_: 7c8o C: [404562]
        automated match to d2z7ec_
        complexed with fes
      4. 3007802Domain d7c8od_: 7c8o D: [404658]
        automated match to d2z7ec_
        complexed with fes
    3. Domains for 7cnv:
      1. 3084507Domain d7cnvc_: 7cnv C: [420824]
        Other proteins in same PDB: d7cnva2, d7cnve2
        automated match to d7c8na_
        complexed with 1pe, fe2, fes, pge, so4
      2. 3084512Domain d7cnva1: 7cnv A:1-129 [420829]
        Other proteins in same PDB: d7cnva2, d7cnve2
        automated match to d7c8na_
        complexed with 1pe, fe2, fes, pge, so4
      3. 3084530Domain d7cnve1: 7cnv E:1-129 [420847]
        Other proteins in same PDB: d7cnva2, d7cnve2
        automated match to d7c8na_
        complexed with 1pe, fe2, fes, pge, so4
      4. 3084553Domain d7cnvd_: 7cnv D: [420870]
        Other proteins in same PDB: d7cnva2, d7cnve2
        automated match to d7c8na_
        complexed with 1pe, fe2, fes, pge, so4
      5. 3084559Domain d7cnvf_: 7cnv F: [420876]
        Other proteins in same PDB: d7cnva2, d7cnve2
        automated match to d7c8na_
        complexed with 1pe, fe2, fes, pge, so4
      6. 3084568Domain d7cnvb_: 7cnv B: [420885]
        Other proteins in same PDB: d7cnva2, d7cnve2
        automated match to d7c8na_
        complexed with 1pe, fe2, fes, pge, so4
  7. 3007803Thermus thermophilus [TaxId:274] [188505] (1 PDB entry)

More info for Protein automated matches from d.224.1.0: automated matches

Timeline for Protein automated matches from d.224.1.0: automated matches: