Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2309938Fold a.16: S15/NS1 RNA-binding domain [47059] (1 superfamily)
    3 helices; irregular array
  4. 2309939Superfamily a.16.1: S15/NS1 RNA-binding domain [47060] (4 families) (S)
  5. 2309940Family a.16.1.1: N-terminal, RNA-binding domain of nonstructural protein NS1 [47061] (2 protein domains)
  6. 2309949Protein automated matches [190929] (6 species)
    not a true protein

Species:

  1. 2309950Influenza A virus (a/brevig mission/1/1918(h1n1)) [TaxId:88776] [277537] (1 PDB entry)
  2. 2309953Influenza A virus (a/california/07/2009(h1n1)) [TaxId:641809] [189318] (1 PDB entry)
  3. 2309966Influenza A virus (a/flat-faced bat/peru/033/2010(h18n11)) [TaxId:1395524] [276129] (1 PDB entry)
  4. 2309969Influenza A virus (a/little yellow-shouldered bat/guatemala/153/2009(h17n10)) [TaxId:1129345] [276215] (1 PDB entry)
  5. 2309972Influenza A virus, different strains [TaxId:11320] [188439] (2 PDB entries)
    1. Domains for 2z0a:
      1. 2309973Domain d2z0aa_: 2z0a A: [170948]
        Other proteins in same PDB: d2z0ac2
        automated match to d1ns1a_
        complexed with gly, sin
      2. 2309974Domain d2z0ab_: 2z0a B: [170949]
        Other proteins in same PDB: d2z0ac2
        automated match to d1ns1a_
        complexed with gly, sin
      3. 2309975Domain d2z0ac1: 2z0a C:1-71 [170950]
        Other proteins in same PDB: d2z0ac2
        automated match to d1ns1a_
        complexed with gly, sin
      4. 2309976Domain d2z0ad_: 2z0a D: [170951]
        Other proteins in same PDB: d2z0ac2
        automated match to d1ns1a_
        complexed with gly, sin
    2. Domains for 2zko:
      1. 2309977Domain d2zkoa_: 2zko A: [171289]
        automated match to d1aila_
        protein/RNA complex; complexed with gol
      2. 2309978Domain d2zkob_: 2zko B: [171290]
        automated match to d1aila_
        protein/RNA complex; complexed with gol
  6. 2309979Influenza B virus [TaxId:107412] [193690] (3 PDB entries)
    1. Domains for 3r66:
      1. 2309983Domain d3r66a_: 3r66 A: [215594]
        Other proteins in same PDB: d3r66c1, d3r66c2, d3r66d1, d3r66d2
        automated match to d3rt3c_
      2. 2309984Domain d3r66b_: 3r66 B: [215595]
        Other proteins in same PDB: d3r66c1, d3r66c2, d3r66d1, d3r66d2
        automated match to d3rt3c_
    2. Domain for 3rt3:
    3. Domains for 3sdl:
      1. 2309981Domain d3sdla_: 3sdl A: [216348]
        Other proteins in same PDB: d3sdlc1, d3sdlc2, d3sdld1, d3sdld2
        automated match to d3rt3c_
      2. 2309982Domain d3sdlb_: 3sdl B: [216349]
        Other proteins in same PDB: d3sdlc1, d3sdlc2, d3sdld1, d3sdld2
        automated match to d3rt3c_

More info for Protein automated matches from a.16.1.1: N-terminal, RNA-binding domain of nonstructural protein NS1

Timeline for Protein automated matches from a.16.1.1: N-terminal, RNA-binding domain of nonstructural protein NS1:

  • Protein automated matches from a.16.1.1: N-terminal, RNA-binding domain of nonstructural protein NS1 first appeared in SCOPe 2.01
  • Protein automated matches from a.16.1.1: N-terminal, RNA-binding domain of nonstructural protein NS1 appears in SCOPe 2.06