Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 965334Fold b.96: Nicotinic receptor ligand binding domain-like [63711] (1 superfamily)
    sandwich; 8 strands in 2 sheets; greek-key: partial topological similarity to immunoglobulin-like folds
  4. 965335Superfamily b.96.1: Nicotinic receptor ligand binding domain-like [63712] (1 family) (S)
  5. 965336Family b.96.1.1: Nicotinic receptor ligand binding domain-like [63713] (2 proteins)
  6. 965389Protein automated matches [190922] (2 species)
    not a true protein

Species:

  1. 965390Great pond snail (Lymnaea stagnalis) [TaxId:6523] [190008] (7 PDB entries)
    1. Domains for 2zju:
      1. 965391Domain d2zjua_: 2zju A: [171252]
        automated match to d1uw6a_
        complexed with im4
      2. 965392Domain d2zjub_: 2zju B: [171253]
        automated match to d1uw6a_
        complexed with im4
      3. 965393Domain d2zjuc_: 2zju C: [171254]
        automated match to d1uw6a_
        complexed with im4
      4. 965394Domain d2zjud_: 2zju D: [171255]
        automated match to d1uw6a_
        complexed with im4
      5. 965395Domain d2zjue_: 2zju E: [171256]
        automated match to d1uw6a_
        complexed with im4
    2. Domains for 2zjv:
      1. 965396Domain d2zjva_: 2zjv A: [171257]
        automated match to d1uw6a_
        complexed with ct4
      2. 965397Domain d2zjvb_: 2zjv B: [171258]
        automated match to d1uw6a_
        complexed with ct4
      3. 965398Domain d2zjvc_: 2zjv C: [171259]
        automated match to d1uw6a_
        complexed with ct4
      4. 965399Domain d2zjvd_: 2zjv D: [171260]
        automated match to d1uw6a_
        complexed with ct4
      5. 965400Domain d2zjve_: 2zjv E: [171261]
        automated match to d1uw6a_
        complexed with ct4
    3. Domains for 3u8j:
      1. 965431Domain d3u8ja_: 3u8j A: [186112]
        automated match to d1uw6a_
        complexed with 09o, nag, so4
      2. 965432Domain d3u8jb_: 3u8j B: [186113]
        automated match to d1uw6a_
        complexed with 09o, nag, so4
      3. 965433Domain d3u8jc_: 3u8j C: [186114]
        automated match to d1uw6a_
        complexed with 09o, nag, so4
      4. 965434Domain d3u8jd_: 3u8j D: [186115]
        automated match to d1uw6a_
        complexed with 09o, nag, so4
      5. 965435Domain d3u8je_: 3u8j E: [186116]
        automated match to d1uw6a_
        complexed with 09o, nag, so4
      6. 965436Domain d3u8jf_: 3u8j F: [186117]
        automated match to d1uw6a_
        complexed with 09o, nag, so4
      7. 965437Domain d3u8jg_: 3u8j G: [186118]
        automated match to d1uw6a_
        complexed with 09o, nag, so4
      8. 965438Domain d3u8jh_: 3u8j H: [186119]
        automated match to d1uw6a_
        complexed with 09o, nag, so4
      9. 965439Domain d3u8ji_: 3u8j I: [186120]
        automated match to d1uw6a_
        complexed with 09o, nag, so4
      10. 965440Domain d3u8jj_: 3u8j J: [186121]
        automated match to d1uw6a_
        complexed with 09o, nag, so4
    4. Domains for 3u8k:
      1. 965441Domain d3u8ka_: 3u8k A: [186122]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      2. 965442Domain d3u8kb_: 3u8k B: [186123]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      3. 965443Domain d3u8kc_: 3u8k C: [186124]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      4. 965444Domain d3u8kd_: 3u8k D: [186125]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      5. 965445Domain d3u8ke_: 3u8k E: [186126]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      6. 965446Domain d3u8kf_: 3u8k F: [186127]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      7. 965447Domain d3u8kg_: 3u8k G: [186128]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      8. 965448Domain d3u8kh_: 3u8k H: [186129]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      9. 965449Domain d3u8ki_: 3u8k I: [186130]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      10. 965450Domain d3u8kj_: 3u8k J: [186131]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      11. 965451Domain d3u8kk_: 3u8k K: [186132]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      12. 965452Domain d3u8kl_: 3u8k L: [186133]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      13. 965453Domain d3u8km_: 3u8k M: [186134]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      14. 965454Domain d3u8kn_: 3u8k N: [186135]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      15. 965455Domain d3u8ko_: 3u8k O: [186136]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      16. 965456Domain d3u8kp_: 3u8k P: [186137]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      17. 965457Domain d3u8kq_: 3u8k Q: [186138]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      18. 965458Domain d3u8kr_: 3u8k R: [186139]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      19. 965459Domain d3u8ks_: 3u8k S: [186140]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
      20. 965460Domain d3u8kt_: 3u8k T: [186141]
        automated match to d1uw6a_
        complexed with 09p, nag, so4
    5. Domains for 3u8l:
      1. 965401Domain d3u8la_: 3u8l A: [186142]
        automated match to d1uw6a_
        complexed with 09q, so4
      2. 965402Domain d3u8lb_: 3u8l B: [186143]
        automated match to d1uw6a_
        complexed with 09q, so4
      3. 965403Domain d3u8lc_: 3u8l C: [186144]
        automated match to d1uw6a_
        complexed with 09q, so4
      4. 965404Domain d3u8ld_: 3u8l D: [186145]
        automated match to d1uw6a_
        complexed with 09q, so4
      5. 965405Domain d3u8le_: 3u8l E: [186146]
        automated match to d1uw6a_
        complexed with 09q, so4
      6. 965406Domain d3u8lf_: 3u8l F: [186147]
        automated match to d1uw6a_
        complexed with 09q, so4
      7. 965407Domain d3u8lg_: 3u8l G: [186148]
        automated match to d1uw6a_
        complexed with 09q, so4
      8. 965408Domain d3u8lh_: 3u8l H: [186149]
        automated match to d1uw6a_
        complexed with 09q, so4
      9. 965409Domain d3u8li_: 3u8l I: [186150]
        automated match to d1uw6a_
        complexed with 09q, so4
      10. 965410Domain d3u8lj_: 3u8l J: [186151]
        automated match to d1uw6a_
        complexed with 09q, so4
    6. Domains for 3u8m:
      1. 965461Domain d3u8ma_: 3u8m A: [186152]
        automated match to d1uw6a_
        complexed with 09r, so4
      2. 965462Domain d3u8mb_: 3u8m B: [186153]
        automated match to d1uw6a_
        complexed with 09r, so4
      3. 965463Domain d3u8mc_: 3u8m C: [186154]
        automated match to d1uw6a_
        complexed with 09r, so4
      4. 965464Domain d3u8md_: 3u8m D: [186155]
        automated match to d1uw6a_
        complexed with 09r, so4
      5. 965465Domain d3u8me_: 3u8m E: [186156]
        automated match to d1uw6a_
        complexed with 09r, so4
      6. 965466Domain d3u8mf_: 3u8m F: [186157]
        automated match to d1uw6a_
        complexed with 09r, so4
      7. 965467Domain d3u8mg_: 3u8m G: [186158]
        automated match to d1uw6a_
        complexed with 09r, so4
      8. 965468Domain d3u8mh_: 3u8m H: [186159]
        automated match to d1uw6a_
        complexed with 09r, so4
      9. 965469Domain d3u8mi_: 3u8m I: [186160]
        automated match to d1uw6a_
        complexed with 09r, so4
      10. 965470Domain d3u8mj_: 3u8m J: [186161]
        automated match to d1uw6a_
        complexed with 09r, so4
      11. 965471Domain d3u8mk_: 3u8m K: [186162]
        automated match to d1uw6a_
        complexed with 09r, so4
      12. 965472Domain d3u8ml_: 3u8m L: [186163]
        automated match to d1uw6a_
        complexed with 09r, so4
      13. 965473Domain d3u8mm_: 3u8m M: [186164]
        automated match to d1uw6a_
        complexed with 09r, so4
      14. 965474Domain d3u8mn_: 3u8m N: [186165]
        automated match to d1uw6a_
        complexed with 09r, so4
      15. 965475Domain d3u8mo_: 3u8m O: [186166]
        automated match to d1uw6a_
        complexed with 09r, so4
      16. 965476Domain d3u8mp_: 3u8m P: [186167]
        automated match to d1uw6a_
        complexed with 09r, so4
      17. 965477Domain d3u8mq_: 3u8m Q: [186168]
        automated match to d1uw6a_
        complexed with 09r, so4
      18. 965478Domain d3u8mr_: 3u8m R: [186169]
        automated match to d1uw6a_
        complexed with 09r, so4
      19. 965479Domain d3u8ms_: 3u8m S: [186170]
        automated match to d1uw6a_
        complexed with 09r, so4
      20. 965480Domain d3u8mt_: 3u8m T: [186171]
        automated match to d1uw6a_
        complexed with 09r, so4
    7. Domains for 3u8n:
      1. 965411Domain d3u8na_: 3u8n A: [186172]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      2. 965412Domain d3u8nb_: 3u8n B: [186173]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      3. 965413Domain d3u8nc_: 3u8n C: [186174]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      4. 965414Domain d3u8nd_: 3u8n D: [186175]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      5. 965415Domain d3u8ne_: 3u8n E: [186176]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      6. 965416Domain d3u8nf_: 3u8n F: [186177]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      7. 965417Domain d3u8ng_: 3u8n G: [186178]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      8. 965418Domain d3u8nh_: 3u8n H: [186179]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      9. 965419Domain d3u8ni_: 3u8n I: [186180]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      10. 965420Domain d3u8nj_: 3u8n J: [186181]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      11. 965421Domain d3u8nk_: 3u8n K: [186182]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      12. 965422Domain d3u8nl_: 3u8n L: [186183]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      13. 965423Domain d3u8nm_: 3u8n M: [186184]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      14. 965424Domain d3u8nn_: 3u8n N: [186185]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      15. 965425Domain d3u8no_: 3u8n O: [186186]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      16. 965426Domain d3u8np_: 3u8n P: [186187]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      17. 965427Domain d3u8nq_: 3u8n Q: [186188]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      18. 965428Domain d3u8nr_: 3u8n R: [186189]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      19. 965429Domain d3u8ns_: 3u8n S: [186190]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
      20. 965430Domain d3u8nt_: 3u8n T: [186191]
        automated match to d1uw6a_
        complexed with 09s, nag, so4
  2. 965481Human (Homo sapiens) [TaxId:9606] [189722] (1 PDB entry)

More info for Protein automated matches from b.96.1.1: Nicotinic receptor ligand binding domain-like

Timeline for Protein automated matches from b.96.1.1: Nicotinic receptor ligand binding domain-like:

  • Protein automated matches from b.96.1.1: Nicotinic receptor ligand binding domain-like is new in SCOPe 2.01-stable
  • Protein automated matches from b.96.1.1: Nicotinic receptor ligand binding domain-like appears in SCOPe 2.02
  • Protein automated matches from b.96.1.1: Nicotinic receptor ligand binding domain-like appears in the current release, SCOPe 2.08