Class b: All beta proteins [48724] (180 folds) |
Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies) sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies |
Superfamily b.121.5: ssDNA viruses [88645] (4 families) |
Family b.121.5.2: Parvoviridae-like VP [88646] (3 proteins) automatically mapped to Pfam PF00740 |
Protein automated matches [190920] (12 species) not a true protein |
Adeno-associated virus - 1 [TaxId:85106] [255978] (3 PDB entries) |
Domain d3ng9a_: 3ng9 A: [247905] automated match to d1lp3a_ complexed with ade, cyt |
Domain d3ng9b_: 3ng9 B: [247906] automated match to d1lp3a_ complexed with ade, cyt |
Domain d3ng9c_: 3ng9 C: [247907] automated match to d1lp3a_ complexed with ade, cyt |
Domain d3ng9d_: 3ng9 D: [247908] automated match to d1lp3a_ complexed with ade, cyt |
Domain d3ng9e_: 3ng9 E: [247909] automated match to d1lp3a_ complexed with ade, cyt |
Domain d3ng9f_: 3ng9 F: [247910] automated match to d1lp3a_ complexed with ade, cyt |
Domain d3ng9g_: 3ng9 G: [247911] automated match to d1lp3a_ complexed with ade, cyt |
Domain d3ng9h_: 3ng9 H: [247912] automated match to d1lp3a_ complexed with ade, cyt |
Domain d3ng9i_: 3ng9 I: [247913] automated match to d1lp3a_ complexed with ade, cyt |
Domain d3ng9j_: 3ng9 J: [247914] automated match to d1lp3a_ complexed with ade, cyt |
Domain d5egca_: 5egc A: [313631] automated match to d3kica_ protein/DNA complex; complexed with mg, sia |
Domain d6jcra_: 6jcr A: [376004] automated match to d3oaha_ |
Adeno-associated virus - 2 [TaxId:648242] [370930] (1 PDB entry) |
Domain d6nz0a_: 6nz0 A: [370931] automated match to d3kica_ complexed with mg |
Adeno-associated virus - 5 [TaxId:82300] [372302] (2 PDB entries) |
Domain d6jcsa_: 6jcs A: [372988] automated match to d3oaha_ |
Domain d6jcta_: 6jct A: [372303] automated match to d3oaha_ |
Adeno-associated virus - 6 [TaxId:68558] [254925] (5 PDB entries) |
Domain d1vu0a_: 1vu0 a: [240809] |
Domain d1vu0b_: 1vu0 b: [240810] |
Domain d1vu0c_: 1vu0 c: [240811] |
Domain d1vu0d_: 1vu0 d: [240812] |
Domain d1vu0e_: 1vu0 e: [240813] |
Domain d1vu0f_: 1vu0 f: [240814] |
Domain d1vu0g_: 1vu0 g: [240815] |
Domain d1vu0h_: 1vu0 h: [240816] |
Domain d1vu0i_: 1vu0 i: [240817] |
Domain d1vu0j_: 1vu0 j: [240818] |
Domain d1vu0k_: 1vu0 k: [240819] |
Domain d1vu0l_: 1vu0 l: [240820] |
Domain d1vu0m_: 1vu0 m: [240821] |
Domain d1vu0n_: 1vu0 n: [240822] |
Domain d1vu0u_: 1vu0 U: [240823] |
Domain d1vu0v_: 1vu0 V: [240824] |
Domain d1vu0w_: 1vu0 W: [240825] |
Domain d1vu0x_: 1vu0 X: [240826] |
Domain d1vu0y_: 1vu0 Y: [240827] |
Domain d1vu0z_: 1vu0 Z: [240828] |
Domain d1vu10_: 1vu1 0: [240829] |
Domain d1vu11_: 1vu1 1: [240830] |
Domain d1vu12_: 1vu1 2: [240831] |
Domain d1vu13_: 1vu1 3: [240832] |
Domain d1vu14_: 1vu1 4: [240833] |
Domain d1vu15_: 1vu1 5: [240834] |
Domain d1vu16_: 1vu1 6: [240835] |
Domain d1vu17_: 1vu1 7: [240836] |
Domain d1vu1o_: 1vu1 o: [240837] |
Domain d1vu1p_: 1vu1 p: [240838] |
Domain d1vu1q_: 1vu1 q: [240839] |
Domain d1vu1r_: 1vu1 r: [240840] |
Domain d1vu1s_: 1vu1 s: [240841] |
Domain d1vu1t_: 1vu1 t: [240842] |
Domain d1vu1u_: 1vu1 u: [240843] |
Domain d1vu1v_: 1vu1 v: [240844] |
Domain d1vu1w_: 1vu1 w: [240845] |
Domain d1vu1x_: 1vu1 x: [240846] |
Domain d1vu1y_: 1vu1 y: [240847] |
Domain d1vu1z_: 1vu1 z: [240848] |
Domain d3oaha_: 3oah A: [248153] automated match to d1lp3a_ complexed with cyt, oah |
Domain d3shma_: 3shm A: [249454] automated match to d1lp3a_ |
Domain d3shmb_: 3shm B: [249455] automated match to d1lp3a_ |
Domain d3shmc_: 3shm C: [249456] automated match to d1lp3a_ |
Domain d3shmd_: 3shm D: [249457] automated match to d1lp3a_ |
Domain d3shme_: 3shm E: [249458] automated match to d1lp3a_ |
Domain d3shmf_: 3shm F: [249459] automated match to d1lp3a_ |
Domain d3shmg_: 3shm G: [249460] automated match to d1lp3a_ |
Domain d3shmh_: 3shm H: [249461] automated match to d1lp3a_ |
Domain d3shmi_: 3shm I: [249462] automated match to d1lp3a_ |
Domain d3shmj_: 3shm J: [249463] automated match to d1lp3a_ |
Domain d3shmk_: 3shm K: [249464] automated match to d1lp3a_ |
Domain d3shml_: 3shm L: [249465] automated match to d1lp3a_ |
Domain d3shmm_: 3shm M: [249466] automated match to d1lp3a_ |
Domain d3shmn_: 3shm N: [249467] automated match to d1lp3a_ |
Domain d3shmo_: 3shm O: [249468] automated match to d1lp3a_ |
Domain d3shmp_: 3shm P: [249469] automated match to d1lp3a_ |
Domain d3shmq_: 3shm Q: [249470] automated match to d1lp3a_ |
Domain d3shmr_: 3shm R: [249471] automated match to d1lp3a_ |
Domain d3shms_: 3shm S: [249472] automated match to d1lp3a_ |
Domain d3shmt_: 3shm T: [249473] automated match to d1lp3a_ |
Domain d3tsxa_: 3tsx A: [249999] |
Domain d3tsxb_: 3tsx B: [250000] |
Domain d3tsxc_: 3tsx C: [250001] |
Domain d3tsxd_: 3tsx D: [250002] |
Domain d3tsxe_: 3tsx E: [250003] |
Domain d3tsxf_: 3tsx F: [250004] |
Domain d3tsxg_: 3tsx G: [250005] |
Domain d3tsxh_: 3tsx H: [250006] |
Domain d3tsxi_: 3tsx I: [250007] |
Domain d3tsxj_: 3tsx J: [250008] |
Domain d3tsxk_: 3tsx K: [250009] |
Domain d3tsxl_: 3tsx L: [250010] |
Domain d3tsxm_: 3tsx M: [250011] |
Domain d3tsxn_: 3tsx N: [250012] |
Domain d3tsxo_: 3tsx O: [250013] |
Domain d3tsxp_: 3tsx P: [250014] |
Domain d3tsxq_: 3tsx Q: [250015] |
Domain d3tsxr_: 3tsx R: [250016] |
Domain d3tsxs_: 3tsx S: [250017] |
Domain d3tsxt_: 3tsx T: [250018] |
Adeno-associated virus - 7 [TaxId:202812] [390290] (1 PDB entry) |
Domain d7jota_: 7jot A: [390291] automated match to d3oaha_ |
Adeno-associated virus - 8 [TaxId:202813] [188409] (5 PDB entries) |
Domain d2qa0a_: 2qa0 A: [167486] automated match to d1lp3a_ complexed with na |
Domain d3ra2a_: 3ra2 A: [184871] automated match to d1lp3a_ |
Domain d3ra4a_: 3ra4 A: [196156] automated match to d1lp3a_ |
Domain d3ra8a_: 3ra8 A: [184872] automated match to d1lp3a_ complexed with a |
Domain d3ra9a_: 3ra9 A: [215683] automated match to d2qa0a_ |
Adeno-associated virus 2 (isolate srivastava/1982) [TaxId:648242] [366489] (2 PDB entries) |
Domain d6ih9a_: 6ih9 A: [370257] automated match to d3oaha_ |
Domain d6ihba_: 6ihb A: [366490] automated match to d3kica_ |
Adeno-associated virus 3b [TaxId:68742] [255908] (2 PDB entries) |
Domain d3kica_: 3kic A: [247164] automated match to d1lp3a_ complexed with d5m |
Domain d3kicb_: 3kic B: [247165] automated match to d1lp3a_ complexed with d5m |
Domain d3kicc_: 3kic C: [247166] automated match to d1lp3a_ complexed with d5m |
Domain d3kicd_: 3kic D: [247167] automated match to d1lp3a_ complexed with d5m |
Domain d3kice_: 3kic E: [247168] automated match to d1lp3a_ complexed with d5m |
Domain d3kicf_: 3kic F: [247169] automated match to d1lp3a_ complexed with d5m |
Domain d3kicg_: 3kic G: [247170] automated match to d1lp3a_ complexed with d5m |
Domain d3kich_: 3kic H: [247171] automated match to d1lp3a_ complexed with d5m |
Domain d3kici_: 3kic I: [247172] automated match to d1lp3a_ complexed with d5m |
Domain d3kicj_: 3kic J: [247173] automated match to d1lp3a_ complexed with d5m |
Domain d3kick_: 3kic K: [247174] automated match to d1lp3a_ complexed with d5m |
Domain d3kicl_: 3kic L: [247175] automated match to d1lp3a_ complexed with d5m |
Domain d3kicm_: 3kic M: [247176] automated match to d1lp3a_ complexed with d5m |
Domain d3kicn_: 3kic N: [247177] automated match to d1lp3a_ complexed with d5m |
Domain d3kico_: 3kic O: [247178] automated match to d1lp3a_ complexed with d5m |
Domain d3kicp_: 3kic P: [247179] automated match to d1lp3a_ complexed with d5m |
Domain d3kicq_: 3kic Q: [247180] automated match to d1lp3a_ complexed with d5m |
Domain d3kicr_: 3kic R: [247181] automated match to d1lp3a_ complexed with d5m |
Domain d3kics_: 3kic S: [247182] automated match to d1lp3a_ complexed with d5m |
Domain d3kict_: 3kic T: [247183] automated match to d1lp3a_ complexed with d5m |
Domain d3kiea_: 3kie A: [247184] automated match to d1lp3a_ complexed with d5m |
Domain d3kieb_: 3kie B: [247185] automated match to d1lp3a_ complexed with d5m |
Domain d3kiec_: 3kie C: [247186] automated match to d1lp3a_ complexed with d5m |
Domain d3kied_: 3kie D: [247187] automated match to d1lp3a_ complexed with d5m |
Domain d3kiee_: 3kie E: [247188] automated match to d1lp3a_ complexed with d5m |
Domain d3kief_: 3kie F: [247189] automated match to d1lp3a_ complexed with d5m |
Domain d3kieg_: 3kie G: [247190] automated match to d1lp3a_ complexed with d5m |
Domain d3kieh_: 3kie H: [247191] automated match to d1lp3a_ complexed with d5m |
Domain d3kiei_: 3kie I: [247192] automated match to d1lp3a_ complexed with d5m |
Domain d3kiej_: 3kie J: [247193] automated match to d1lp3a_ complexed with d5m |
Domain d3kiek_: 3kie K: [247194] automated match to d1lp3a_ complexed with d5m |
Domain d3kiel_: 3kie L: [247195] automated match to d1lp3a_ complexed with d5m |
Domain d3kiem_: 3kie M: [247196] automated match to d1lp3a_ complexed with d5m |
Domain d3kien_: 3kie N: [247197] automated match to d1lp3a_ complexed with d5m |
Domain d3kieo_: 3kie O: [247198] automated match to d1lp3a_ complexed with d5m |
Domain d3kiep_: 3kie P: [247199] automated match to d1lp3a_ complexed with d5m |
Domain d3kieq_: 3kie Q: [247200] automated match to d1lp3a_ complexed with d5m |
Domain d3kier_: 3kie R: [247201] automated match to d1lp3a_ complexed with d5m |
Domain d3kies_: 3kie S: [247202] automated match to d1lp3a_ complexed with d5m |
Domain d3kiet_: 3kie T: [247203] automated match to d1lp3a_ complexed with d5m |
Adeno-associated virus 9 [TaxId:235455] [193792] (1 PDB entry) |
Domain d3ux1a_: 3ux1 A: [193793] automated match to d1lp3a_ |
Adeno-associated virus [TaxId:272636] [334622] (3 PDB entries) |
Domain d5uf6a_: 5uf6 A: [334623] automated match to d3oaha_ |
Domain d6u95a_: 6u95 A: [374507] automated match to d3kica_ |
Domain d7kfra_: 7kfr A: [397067] automated match to d3kica_ complexed with mg |
Canine parvovirus 2 [TaxId:246878] [374284] (1 PDB entry) |
Domain d6oas1_: 6oas 1: [374285] automated match to d1k3va_ |
H-1 parvovirus [TaxId:10799] [256260] (1 PDB entry) |
Domain d4g0ra_: 4g0r A: [252120] automated match to d1mvma_ protein/DNA complex; complexed with cl, dc, edo, mg, na |
Timeline for Protein automated matches from b.121.5.2: Parvoviridae-like VP: