Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.140: Replicase NSP9 [101815] (1 superfamily)
    barrel; n=6, S=8, greek-key; similar to one trypsin-like protease barrel
  4. Superfamily b.140.1: Replicase NSP9 [101816] (2 families) (S)
  5. Family b.140.1.0: automated matches [191526] (1 protein)
    not a true family
  6. Protein automated matches [190886] (4 species)
    not a true protein

Species:

  1. Avian infectious bronchitis virus [TaxId:11127] [318923] (1 PDB entry)
  2. Human coronavirus 229E [TaxId:11137] [188277] (2 PDB entries)
    1. Domain for 2j97:
    2. Domains for 2j98:
      1. Domain d2j98a_: 2j98 A: [165950]
        automated match to d1uw7a_
        complexed with dtt; mutant
      2. Domain d2j98b_: 2j98 B: [165951]
        automated match to d1uw7a_
        complexed with dtt; mutant
  3. Porcine coronavirus hku15 [TaxId:1159905] [353578] (2 PDB entries)
    1. Domains for 5ym6:
      1. Domain d5ym6a_: 5ym6 A: [353584]
        automated match to d1qz8b_
      2. Domain d5ym6b_: 5ym6 B: [353592]
        automated match to d1qz8b_
      3. Domain d5ym6c_: 5ym6 C: [353591]
        automated match to d1qz8b_
      4. Domain d5ym6d_: 5ym6 D: [353579]
        automated match to d1qz8b_
    2. Domains for 5ym8:
      1. Domain d5ym8b_: 5ym8 B: [415589]
        automated match to d5ym6b_
      2. Domain d5ym8a_: 5ym8 A: [415588]
        automated match to d5ym6b_
  4. Porcine epidemic diarrhea virus cv777 [TaxId:229032] [328880] (2 PDB entries)
    1. Domains for 5hiy:
      1. Domain d5hiya_: 5hiy A: [328944]
        automated match to d1qz8a_
        mutant
      2. Domain d5hiyb_: 5hiy B: [328931]
        automated match to d1qz8a_
        mutant
      3. Domain d5hiyc_: 5hiy C: [328957]
        automated match to d1qz8a_
        mutant
    2. Domains for 5hiz:
      1. Domain d5hiza_: 5hiz A: [328950]
        automated match to d1qz8a_
      2. Domain d5hizb_: 5hiz B: [328881]
        automated match to d1qz8a_

More info for Protein automated matches from b.140.1.0: automated matches

Timeline for Protein automated matches from b.140.1.0: automated matches: