Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2201108Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
    core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
  4. 2202094Superfamily d.79.5: IpsF-like [69765] (2 families) (S)
    forms trimers with three closely packed beta-sheets; possible link between the YjgF-like (d.79.1) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
  5. 2202231Family d.79.5.0: automated matches [191525] (1 protein)
    not a true family
  6. 2202232Protein automated matches [190884] (7 species)
    not a true protein

Species:

  1. 2202233Burkholderia cenocepacia [TaxId:216591] [235915] (3 PDB entries)
    1. Domains for 4c8e:
      1. 2202237Domain d4c8ea_: 4c8e A: [236299]
        automated match to d4c8gc_
        complexed with c5p, peg, so4, zn
      2. 2202238Domain d4c8eb_: 4c8e B: [236294]
        automated match to d4c8gc_
        complexed with c5p, peg, so4, zn
      3. 2202239Domain d4c8ec_: 4c8e C: [236298]
        automated match to d4c8gc_
        complexed with c5p, peg, so4, zn
    2. Domains for 4c8g:
      1. 2202240Domain d4c8ga_: 4c8g A: [236295]
        automated match to d4c8gc_
        complexed with c5p, mg, po4, zn
      2. 2202241Domain d4c8gb_: 4c8g B: [235917]
        automated match to d2pmpa_
        complexed with c5p, mg, po4, zn
      3. 2202242Domain d4c8gc_: 4c8g C: [235916]
        automated match to d2pmpa_
        complexed with c5p, mg, po4, zn
    3. Domains for 4c8i:
      1. 2202234Domain d4c8ia_: 4c8i A: [236300]
        automated match to d4c8gc_
        complexed with cit, po4, zn
      2. 2202235Domain d4c8ib_: 4c8i B: [236297]
        automated match to d4c8gc_
        complexed with cit, po4, zn
      3. 2202236Domain d4c8ic_: 4c8i C: [236296]
        automated match to d4c8gc_
        complexed with cit, po4, zn
  2. 2202243Burkholderia pseudomallei [TaxId:28450] [255823] (12 PDB entries)
    1. Domains for 3f0d:
      1. 2202244Domain d3f0da_: 3f0d A: [245994]
        automated match to d3re3a_
        complexed with zn
      2. 2202245Domain d3f0db_: 3f0d B: [245995]
        automated match to d3re3a_
        complexed with zn
      3. 2202246Domain d3f0dc_: 3f0d C: [245996]
        automated match to d3re3a_
        complexed with zn
      4. 2202247Domain d3f0dd_: 3f0d D: [245997]
        automated match to d3re3a_
        complexed with zn
      5. 2202248Domain d3f0de_: 3f0d E: [245998]
        automated match to d3re3a_
        complexed with zn
      6. 2202249Domain d3f0df_: 3f0d F: [245999]
        automated match to d3re3a_
        complexed with zn
    2. Domains for 3f0e:
      1. 2202271Domain d3f0ea_: 3f0e A: [246000]
        automated match to d3re3a_
        complexed with mg, zn
      2. 2202272Domain d3f0eb_: 3f0e B: [246001]
        automated match to d3re3a_
        complexed with mg, zn
      3. 2202273Domain d3f0ec_: 3f0e C: [246002]
        automated match to d3re3a_
        complexed with mg, zn
    3. Domains for 3f0f:
      1. 2202274Domain d3f0fa_: 3f0f A: [246003]
        automated match to d3re3a_
        complexed with c5p, gol, mg, zn
      2. 2202275Domain d3f0fb_: 3f0f B: [246004]
        automated match to d3re3a_
        complexed with c5p, gol, mg, zn
      3. 2202276Domain d3f0fc_: 3f0f C: [246005]
        automated match to d3re3a_
        complexed with c5p, gol, mg, zn
    4. Domains for 3f0g:
      1. 2202280Domain d3f0ga_: 3f0g A: [246006]
        automated match to d3re3a_
        complexed with c5p, zn
      2. 2202281Domain d3f0gb_: 3f0g B: [246007]
        automated match to d3re3a_
        complexed with c5p, zn
      3. 2202282Domain d3f0gc_: 3f0g C: [246008]
        automated match to d3re3a_
        complexed with c5p, zn
      4. 2202283Domain d3f0gd_: 3f0g D: [246009]
        automated match to d3re3a_
        complexed with c5p, zn
      5. 2202284Domain d3f0ge_: 3f0g E: [246010]
        automated match to d3re3a_
        complexed with c5p, zn
      6. 2202285Domain d3f0gf_: 3f0g F: [246011]
        automated match to d3re3a_
        complexed with c5p, zn
    5. Domains for 3ieq:
      1. 2202268Domain d3ieqa_: 3ieq A: [246905]
        automated match to d3re3a_
        complexed with c, cl, mg, zn
      2. 2202269Domain d3ieqb_: 3ieq B: [246906]
        automated match to d3re3a_
        complexed with c, cl, mg, zn
      3. 2202270Domain d3ieqc_: 3ieq C: [246907]
        automated match to d3re3a_
        complexed with c, cl, mg, zn
    6. Domains for 3iew:
      1. 2202277Domain d3iewa1: 3iew A:1-159 [246908]
        Other proteins in same PDB: d3iewa2
        automated match to d3re3a_
        complexed with cdp, ctp, gol, zn
      2. 2202278Domain d3iewb_: 3iew B: [246909]
        Other proteins in same PDB: d3iewa2
        automated match to d3re3a_
        complexed with cdp, ctp, gol, zn
      3. 2202279Domain d3iewc_: 3iew C: [246910]
        Other proteins in same PDB: d3iewa2
        automated match to d3re3a_
        complexed with cdp, ctp, gol, zn
    7. Domains for 3jvh:
      1. 2202253Domain d3jvha_: 3jvh A: [247061]
        automated match to d3re3a_
        complexed with gol, hhv, zn
      2. 2202254Domain d3jvhb_: 3jvh B: [247062]
        automated match to d3re3a_
        complexed with gol, hhv, zn
      3. 2202255Domain d3jvhc_: 3jvh C: [247063]
        automated match to d3re3a_
        complexed with gol, hhv, zn
    8. Domains for 3k14:
      1. 2202259Domain d3k14a_: 3k14 A: [247092]
        automated match to d3re3a_
        complexed with 535, act, cl, k, zn
      2. 2202260Domain d3k14b_: 3k14 B: [247093]
        automated match to d3re3a_
        complexed with 535, act, cl, k, zn
      3. 2202261Domain d3k14c_: 3k14 C: [247094]
        automated match to d3re3a_
        complexed with 535, act, cl, k, zn
    9. Domains for 3ke1:
      1. 2202265Domain d3ke1a_: 3ke1 A: [247143]
        automated match to d3re3a_
        complexed with 829, k, zn
      2. 2202266Domain d3ke1b_: 3ke1 B: [247144]
        automated match to d3re3a_
        complexed with 829, k, zn
      3. 2202267Domain d3ke1c_: 3ke1 C: [247145]
        automated match to d3re3a_
        complexed with 829, k, zn
    10. Domains for 3mbm:
      1. 2202262Domain d3mbma_: 3mbm A: [247630]
        automated match to d3re3a_
        complexed with 717, cyt, trs, zn
      2. 2202263Domain d3mbmb_: 3mbm B: [247631]
        automated match to d3re3a_
        complexed with 717, cyt, trs, zn
      3. 2202264Domain d3mbmc_: 3mbm C: [247632]
        automated match to d3re3a_
        complexed with 717, cyt, trs, zn
    11. Domains for 3q8h:
      1. 2202256Domain d3q8ha_: 3q8h A: [248805]
        automated match to d3re3a_
        complexed with ao9, edo, k, zn
      2. 2202257Domain d3q8hb_: 3q8h B: [248806]
        automated match to d3re3a_
        complexed with ao9, edo, k, zn
      3. 2202258Domain d3q8hc_: 3q8h C: [248807]
        automated match to d3re3a_
        complexed with ao9, edo, k, zn
    12. Domains for 5l03:
      1. 2202250Domain d5l03a_: 5l03 A: [341244]
        automated match to d3f0da_
        complexed with 6zb, zn
      2. 2202251Domain d5l03b_: 5l03 B: [341240]
        automated match to d3f0da_
        complexed with 6zb, zn
      3. 2202252Domain d5l03c_: 5l03 C: [341279]
        automated match to d3f0da_
        complexed with 6zb, zn
  3. 2202286Burkholderia pseudomallei [TaxId:320372] [255904] (4 PDB entries)
    1. Domains for 3k2x:
      1. 2202293Domain d3k2xa_: 3k2x A: [247104]
        automated match to d3re3a_
        complexed with cl, i5a, k, zn
      2. 2202294Domain d3k2xb_: 3k2x B: [247105]
        automated match to d3re3a_
        complexed with cl, i5a, k, zn
      3. 2202295Domain d3k2xc_: 3k2x C: [247106]
        automated match to d3re3a_
        complexed with cl, i5a, k, zn
    2. Domains for 3p0z:
      1. 2202296Domain d3p0za_: 3p0z A: [248398]
        automated match to d3re3a_
        complexed with cl, ctn, k, msr, zn
      2. 2202297Domain d3p0zb_: 3p0z B: [248399]
        automated match to d3re3a_
        complexed with cl, ctn, k, msr, zn
      3. 2202298Domain d3p0zc_: 3p0z C: [248400]
        automated match to d3re3a_
        complexed with cl, ctn, k, msr, zn
    3. Domains for 3p10:
      1. 2202290Domain d3p10a_: 3p10 A: [248401]
        automated match to d3re3a_
        complexed with cl, ctn, f69, k, zn
      2. 2202291Domain d3p10b_: 3p10 B: [248402]
        automated match to d3re3a_
        complexed with cl, ctn, f69, k, zn
      3. 2202292Domain d3p10c_: 3p10 C: [248403]
        automated match to d3re3a_
        complexed with cl, ctn, f69, k, zn
    4. Domains for 3qhd:
      1. 2202287Domain d3qhda_: 3qhd A: [248883]
        automated match to d3re3a_
        complexed with 795, cl, ctn, k, msr, zn
      2. 2202288Domain d3qhdb_: 3qhd B: [248884]
        automated match to d3re3a_
        complexed with 795, cl, ctn, k, msr, zn
      3. 2202289Domain d3qhdc_: 3qhd C: [248885]
        automated match to d3re3a_
        complexed with 795, cl, ctn, k, msr, zn
  4. 2202299Francisella tularensis [TaxId:177416] [189938] (1 PDB entry)
  5. 2202304Plasmodium falciparum [TaxId:36329] [235918] (1 PDB entry)
  6. 2202306Plasmodium vivax [TaxId:126793] [188273] (1 PDB entry)
  7. 2202308Pseudomonas aeruginosa, PA01 [TaxId:208964] [272191] (1 PDB entry)

More info for Protein automated matches from d.79.5.0: automated matches

Timeline for Protein automated matches from d.79.5.0: automated matches: