Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1419300Fold d.68: IF3-like [55199] (8 superfamilies)
    beta-alpha-beta-alpha-beta(2); 2 layers; mixed sheet 1243, strand 4 is antiparallel to the rest
  4. 1419310Superfamily d.68.2: EPT/RTPC-like [55205] (3 families) (S)
  5. 1419508Family d.68.2.0: automated matches [191521] (1 protein)
    not a true family
  6. 1419509Protein automated matches [190878] (6 species)
    not a true protein

Species:

  1. 1419510Aquifex aeolicus [TaxId:224324] [188240] (2 PDB entries)
    1. Domain for 2yvw:
    2. Domain for 3swg:
  2. 1419513Bacillus halodurans [TaxId:86665] [226131] (1 PDB entry)
  3. 1419518Coxiella burnetii [TaxId:227377] [189961] (3 PDB entries)
    1. Domains for 3roi:
      1. 1419523Domain d3roia_: 3roi A: [185081]
        automated match to d1rf4a_
        complexed with cl, so4
      2. 1419524Domain d3roib_: 3roi B: [185082]
        automated match to d1rf4a_
        complexed with cl, so4
    2. Domains for 3slh:
      1. 1419519Domain d3slha_: 3slh A: [216469]
        automated match to d3roia_
        complexed with 1pe, bme, cl, edo, gpj, peg, pg4, pge, po4, s3p, skm
      2. 1419520Domain d3slhb_: 3slh B: [216470]
        automated match to d4egrb_
        complexed with 1pe, bme, cl, edo, gpj, peg, pg4, pge, po4, s3p, skm
      3. 1419521Domain d3slhc_: 3slh C: [216471]
        automated match to d4egrb_
        complexed with 1pe, bme, cl, edo, gpj, peg, pg4, pge, po4, s3p, skm
      4. 1419522Domain d3slhd_: 3slh D: [216472]
        automated match to d4egrb_
        complexed with 1pe, bme, cl, edo, gpj, peg, pg4, pge, po4, s3p, skm
    3. Domains for 4egr:
      1. 1419525Domain d4egra_: 4egr A: [201839]
        automated match to d4egrb_
        complexed with pep, so4
      2. 1419526Domain d4egrb_: 4egr B: [195624]
        automated match to d3roia_
        complexed with pep, so4
      3. 1419527Domain d4egrc_: 4egr C: [201840]
        automated match to d4egrb_
        complexed with pep, so4
      4. 1419528Domain d4egrd_: 4egr D: [201841]
        automated match to d4egrb_
        complexed with pep, so4
      5. 1419529Domain d4egre_: 4egr E: [201842]
        automated match to d4egrb_
        complexed with pep, so4
      6. 1419530Domain d4egrf_: 4egr F: [201843]
        automated match to d4egrb_
        complexed with pep, so4
  4. 1419531Coxiella burnetii [TaxId:777] [189727] (2 PDB entries)
    1. Domain for 3tr1:
    2. Domain for 4gfp:
  5. 1419534Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [196937] (1 PDB entry)
  6. 1419536Streptococcus pneumoniae [TaxId:373153] [196932] (1 PDB entry)

More info for Protein automated matches from d.68.2.0: automated matches

Timeline for Protein automated matches from d.68.2.0: automated matches: