Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1253684Class a: All alpha proteins [46456] (284 folds)
  3. 1257871Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1260359Superfamily a.4.6: C-terminal effector domain of the bipartite response regulators [46894] (4 families) (S)
    binds to DNA and RNA polymerase; the N-terminal, receiver domain belongs to the CheY family
  5. 1260445Family a.4.6.0: automated matches [191513] (1 protein)
    not a true family
  6. 1260446Protein automated matches [190858] (9 species)
    not a true protein

Species:

  1. 1260447Bacillus subtilis [TaxId:1423] [225130] (1 PDB entry)
  2. 1260449Deinococcus radiodurans [TaxId:1299] [226279] (1 PDB entry)
  3. 1260451Enterococcus faecalis [TaxId:226185] [230777] (1 PDB entry)
  4. 1260453Escherichia coli [TaxId:83333] [226337] (1 PDB entry)
  5. 1260455Mycobacterium tuberculosis [TaxId:1773] [188191] (2 PDB entries)
    1. Domains for 1zlj:
      1. 1260458Domain d1zlja_: 1zlj A: [162519]
        automated match to d1fsea_
      2. 1260459Domain d1zljb_: 1zlj B: [162520]
        automated match to d1fsea_
      3. 1260460Domain d1zljc_: 1zlj C: [162521]
        automated match to d1fsea_
      4. 1260461Domain d1zljd_: 1zlj D: [162522]
        automated match to d1fsea_
      5. 1260462Domain d1zlje_: 1zlj E: [162523]
        automated match to d1fsea_
      6. 1260463Domain d1zljf_: 1zlj F: [162524]
        automated match to d1fsea_
      7. 1260464Domain d1zljg_: 1zlj G: [162525]
        automated match to d1fsea_
      8. 1260465Domain d1zljh_: 1zlj H: [162526]
        automated match to d1fsea_
    2. Domains for 3c57:
      1. 1260456Domain d3c57a_: 3c57 A: [199160]
        automated match to d3c57b_
      2. 1260457Domain d3c57b_: 3c57 B: [195256]
        automated match to d1zljb_
  6. 1260466Mycobacterium tuberculosis [TaxId:83332] [225356] (2 PDB entries)
    1. Domain for 2oqr:
    2. Domains for 2pmu:
      1. 1260467Domain d2pmua_: 2pmu A: [205543]
        automated match to d1gxpb_
        complexed with cl, gly, k, po4, unx
      2. 1260468Domain d2pmub_: 2pmu B: [205544]
        automated match to d1gxpb_
        complexed with cl, gly, k, po4, unx
      3. 1260469Domain d2pmuc_: 2pmu C: [205545]
        automated match to d1gxpb_
        complexed with cl, gly, k, po4, unx
      4. 1260470Domain d2pmud_: 2pmu D: [205546]
        automated match to d1gxpb_
        complexed with cl, gly, k, po4, unx
      5. 1260471Domain d2pmue_: 2pmu E: [205547]
        automated match to d1gxpb_
        complexed with cl, gly, k, po4, unx
      6. 1260472Domain d2pmuf_: 2pmu F: [205548]
        automated match to d1gxpb_
        complexed with cl, gly, k, po4, unx
  7. 1260474Staphylococcus aureus [TaxId:1280] [225593] (1 PDB entry)
  8. 1260477Staphylococcus epidermidis [TaxId:176280] [236417] (1 PDB entry)
  9. 1260479Streptococcus pyogenes [TaxId:1314] [226362] (1 PDB entry)

More info for Protein automated matches from a.4.6.0: automated matches

Timeline for Protein automated matches from a.4.6.0: automated matches: