Species:

1. Acinetobacter baumannii [TaxId:575584] [328679] (1 PDB entry)

   • Domain for 2naz:

     • Domain d2naza_: 2naz A: [328680] automated match to d4nhjb_

2. Bacillus subtilis [TaxId:1423] [225130] (3 PDB entries)

   1. Domain for 2d1v:

      • Domain d2d1va_: 2d1v A: [203860] automated match to d1gxqa_

   2. Domains for 2krf:

      1. Domain d2krfa_: 2krf A: [264359] automated match to d2rnja_

      2. Domain d2krfb_: 2krf B: [264360] automated match to d2rnja_

   3. Domain for 3ulq:

      • Domain d3ulqb_: 3ulq B: [265526] automated match to d2rnja_ protein/DNA complex; complexed with mn

3. Deinococcus radiodurans [TaxId:1299] [226279] (2 PDB entries)

   1. Domain for 3q9s:

      • Domain d3q9sa2: 3q9s A:123-212 [215134] Other proteins in same PDB: d3q9sa1 automated match to d1kgsa1

   2. Domains for 3q9v:

      1. Domain d3q9va_: 3q9v A: [248810] automated match to d2pmub_

      2. Domain d3q9vb_: 3q9v B: [248811] automated match to d2pmub_

4. Enterococcus faecalis [TaxId:226185] [230777] (1 PDB entry)

   • Domain for 2hwv:

     • Domain d2hwva1: 2hwv A:134-232 [230778] Other proteins in same PDB: d2hwva2 automated match to d2pmub_ complexed with so4

5. Escherichia coli K-12 [TaxId:83333] [226337] (1 PDB entry)

   • Domain for 3zq7:

     • Domain d3zq7a_: 3zq7 A: [218399] automated match to d1gxqa_

6. Escherichia coli [TaxId:562] [395322] (1 PDB entry)

   • Domain for 6lgq:

     • Domain d6lgqd2: 6lgq D:127-225 [395323] Other proteins in same PDB: d6lgqd1 automated match to d2oqra2

7. Escherichia coli [TaxId:83333] [315476] (2 PDB entries)

   1. Domains for 4uht:

      1. Domain d4uhta_: 4uht A: [315477] automated match to d3q9vb_ complexed with cl

      2. Domain d4uhtb_: 4uht B: [315478] automated match to d3q9vb_ complexed with cl

   2. Domain for 5ju7:

      • Domain d5ju7a1: 5ju7 A:2-107 [333480] Other proteins in same PDB: d5ju7a2 automated match to d4nhjb_ complexed with zn

8. Helicobacter pylori [TaxId:85963] [255221] (3 PDB entries)

   1. Domain for 2hqn:

      • Domain d2hqna1: 2hqn A:119-223 [242053] Other proteins in same PDB: d2hqna2 automated match to d2d1va_

   2. Domains for 2hqr:

      1. Domain d2hqra2: 2hqr A:118-223 [242057] Other proteins in same PDB: d2hqra1, d2hqrb1 automated match to d1kgsa1

      2. Domain d2hqrb2: 2hqr B:118-223 [242059] Other proteins in same PDB: d2hqra1, d2hqrb1 automated match to d1kgsa1

   3. Domain for 2k4j:

      • Domain d2k4ja1: 2k4j A:13-115 [242376] Other proteins in same PDB: d2k4ja2 automated match to d1odda_

9. Klebsiella pneumoniae [TaxId:1185418] [255488] (1 PDB entry)

   • Domain for 2m87:

     • Domain d2m87a_: 2m87 A: [243136] automated match to d1gxpb_

10. Klebsiella pneumoniae [TaxId:573] [255310] (3 PDB entries)

    1. Domain for 2jzy:

       • Domain d2jzya_: 2jzy A: [242326] automated match to d1gxpa_

    2. Domain for 2mlk:

       • Domain d2mlka1: 2mlk A:131-239 [257942] Other proteins in same PDB: d2mlka2 automated match to d3zq7a_

    3. Domains for 4nhj:

       1. Domain d4nhja_: 4nhj A: [257989] automated match to d3zq7a_ protein/DNA complex

       2. Domain d4nhjb_: 4nhj B: [257990] automated match to d3zq7a_ protein/DNA complex

11. Mycobacterium tuberculosis [TaxId:1773] [188191] (3 PDB entries)

    1. Domains for 1zlj:

       1. Domain d1zlja_: 1zlj A: [162519] Other proteins in same PDB: d1zljb2, d1zljf2 automated match to d1fsea_

       2. Domain d1zljb1: 1zlj B:144-209 [162520] Other proteins in same PDB: d1zljb2, d1zljf2 automated match to d1fsea_

       3. Domain d1zljc_: 1zlj C: [162521] Other proteins in same PDB: d1zljb2, d1zljf2 automated match to d1fsea_

       4. Domain d1zljd_: 1zlj D: [162522] Other proteins in same PDB: d1zljb2, d1zljf2 automated match to d1fsea_

       5. Domain d1zlje_: 1zlj E: [162523] Other proteins in same PDB: d1zljb2, d1zljf2 automated match to d1fsea_

       6. Domain d1zljf1: 1zlj F:144-209 [162524] Other proteins in same PDB: d1zljb2, d1zljf2 automated match to d1fsea_

       7. Domain d1zljg_: 1zlj G: [162525] Other proteins in same PDB: d1zljb2, d1zljf2 automated match to d1fsea_

       8. Domain d1zljh_: 1zlj H: [162526] Other proteins in same PDB: d1zljb2, d1zljf2 automated match to d1fsea_

    2. Domains for 1zlk:

       1. Domain d1zlka_: 1zlk A: [241141] automated match to d1zljb_ protein/DNA complex

       2. Domain d1zlkb_: 1zlk B: [241142] automated match to d1zljb_ protein/DNA complex

    3. Domains for 3c57:

       1. Domain d3c57a_: 3c57 A: [199160] automated match to d3c57b_

       2. Domain d3c57b_: 3c57 B: [195256] automated match to d1zljb_

12. Mycobacterium tuberculosis [TaxId:83332] [225356] (2 PDB entries)

    1. Domain for 2oqr:

       • Domain d2oqra2: 2oqr A:129-226 [205352] Other proteins in same PDB: d2oqra1, d2oqra3 automated match to d1p2fa1 complexed with act, bme, la

    2. Domains for 2pmu:

       1. Domain d2pmua_: 2pmu A: [205543] automated match to d1gxpb_ complexed with cl, gly, k, po4, unx

       2. Domain d2pmub_: 2pmu B: [205544] automated match to d1gxpb_ complexed with cl, gly, k, po4, unx

       3. Domain d2pmuc_: 2pmu C: [205545] automated match to d1gxpb_ complexed with cl, gly, k, po4, unx

       4. Domain d2pmud_: 2pmu D: [205546] automated match to d1gxpb_ complexed with cl, gly, k, po4, unx

       5. Domain d2pmue_: 2pmu E: [205547] automated match to d1gxpb_ complexed with cl, gly, k, po4, unx

       6. Domain d2pmuf_: 2pmu F: [205548] automated match to d1gxpb_ complexed with cl, gly, k, po4, unx

13. Paenisporosarcina sp. [TaxId:1231057] [368172] (1 PDB entry)

    • Domain for 6jqs:

      • Domain d6jqsa_: 6jqs A: [368173] automated match to d2rnja_

14. Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [369648] (1 PDB entry)

    • Domain for 6cqg:

      • Domain d6cqga_: 6cqg A: [369649] automated match to d2d1va_ complexed with zn

15. Salmonella typhimurium [TaxId:602] [267786] (1 PDB entry)

    • Domain for 2jpc:

      • Domain d2jpca_: 2jpc A: [264340] automated match to d2rnja_

16. Staphylococcus aureus [TaxId:1280] [225593] (6 PDB entries)

    1. Domain for 2rnj:

       • Domain d2rnja_: 2rnj A: [243728] automated match to d1zlja_

    2. Domains for 2z9m:

       1. Domain d2z9ma_: 2z9m A: [304800] automated match to d2d1va_

       2. Domain d2z9mb_: 2z9m B: [304801] automated match to d2d1va_

    3. Domains for 2zxj:

       1. Domain d2zxja_: 2zxj A: [207996] automated match to d1gxqa_

       2. Domain d2zxjb_: 2zxj B: [207997] automated match to d1gxqa_

    4. Domains for 4qwq:

       1. Domain d4qwqa_: 4qwq A: [276149] automated match to d4ixaa_

       2. Domain d4qwqb_: 4qwq B: [276251] automated match to d4ixaa_

    5. Domain for 6iju:

       • Domain d6ijua_: 6iju A: [375380] automated match to d3q9vb_

    6. Domain for 6kyx:

       • Domain d6kyxa1: 6kyx A:122-219 [390678] Other proteins in same PDB: d6kyxa2 automated match to d2d1va_

17. Staphylococcus aureus [TaxId:1458279] [275992] (1 PDB entry)

    • Domains for 4u88:

      1. Domain d4u88a_: 4u88 A: [275993] automated match to d4ixaa_

      2. Domain d4u88b_: 4u88 B: [275994] automated match to d4ixaa_

18. Staphylococcus aureus [TaxId:273036] [376189] (1 PDB entry)

    • Domain for 6is4:

      • Domain d6is4a1: 6is4 A:123-219 [376190] Other proteins in same PDB: d6is4a2 automated match to d3q9va_ complexed with mg, na

19. Staphylococcus epidermidis [TaxId:176280] [236417] (1 PDB entry)

    • Domains for 4ixa:

      1. Domain d4ixaa_: 4ixa A: [240272] automated match to d4ixab_

      2. Domain d4ixab_: 4ixa B: [236418] automated match to d2z33a1

20. Streptococcus agalactiae [TaxId:1311] [319313] (1 PDB entry)

    • Domains for 5dcm:

      1. Domain d5dcma1: 5dcm A:128-221 [319339] Other proteins in same PDB: d5dcma2, d5dcmb2 automated match to d3q9vb_

      2. Domain d5dcmb1: 5dcm B:127-221 [319314] Other proteins in same PDB: d5dcma2, d5dcmb2 automated match to d2jpba_

21. Streptococcus mutans [TaxId:1309] [364726] (1 PDB entry)

    • Domains for 5za3:

      1. Domain d5za3a_: 5za3 A: [364728] automated match to d2zxja_

      2. Domain d5za3b_: 5za3 B: [364727] automated match to d2zxja_

22. Streptococcus pneumoniae [TaxId:171101] [350919] (3 PDB entries)

    1. Domain for 5u8k:

       • Domain d5u8ka2: 5u8k A:128-229 [415490] Other proteins in same PDB: d5u8ka1, d5u8ka3, d5u8kb1, d5u8kb3 automated match to d5vfab2 mutant

    2. Domain for 5u8m:

       • Domain d5u8ma2: 5u8m A:128-229 [415496] Other proteins in same PDB: d5u8ma1, d5u8ma3, d5u8mb1, d5u8mb3 automated match to d5vfab2

    3. Domains for 5vfa:

       1. Domain d5vfaa2: 5vfa A:134-229 [350972] Other proteins in same PDB: d5vfaa1, d5vfaa3, d5vfab1, d5vfab3 automated match to d1kgsa1 mutant

       2. Domain d5vfab2: 5vfa B:135-229 [350920] Other proteins in same PDB: d5vfaa1, d5vfaa3, d5vfab1, d5vfab3 automated match to d1kgsa1 mutant

23. Streptococcus pneumoniae [TaxId:487214] [419979] (2 PDB entries)

    1. Domain for 5u8k:

       • Domain d5u8kb2: 5u8k B:128-229 [415493] Other proteins in same PDB: d5u8ka1, d5u8ka3, d5u8kb1, d5u8kb3 automated match to d5vfab2 mutant

    2. Domain for 5u8m:

       • Domain d5u8mb2: 5u8m B:128-229 [415499] Other proteins in same PDB: d5u8ma1, d5u8ma3, d5u8mb1, d5u8mb3 automated match to d5vfab2

24. Streptococcus pyogenes [TaxId:1314] [226362] (1 PDB entry)

    • Domain for 3rjp:

      • Domain d3rjpa_: 3rjp A: [215897] automated match to d1gxpb_

25. Vibrio parahaemolyticus [TaxId:670] [403280] (1 PDB entry)

    • Domains for 7e92:

      1. Domain d7e92a_: 7e92 A: [403281] automated match to d3q9vb_

      2. Domain d7e92b_: 7e92 B: [403290] automated match to d3q9vb_

More info for Protein automated matches from a.4.6.0: automated matches

Timeline for Protein automated matches from a.4.6.0: automated matches:

• Protein automated matches from a.4.6.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from a.4.6.0: automated matches appears in SCOPe 2.07